Protein–RNA interactions for Protein: P31327

CPS1, Carbamoyl-phosphate synthase [ammonia], mitochondrial, humanhuman

Predictions only

Length 1,500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPS1P31327 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC5.65□□□□□ -1.5
CPS1P31327 OR2AT4-205ENST00000641931 8357 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
CPS1P31327 AC234772.1-201ENST00000377927 937 ntBASIC5.65□□□□□ -1.5
CPS1P31327 SNORD3H-201ENST00000384486 214 ntBASIC5.65□□□□□ -1.5
CPS1P31327 LINC02542-201ENST00000418567 822 ntTSL 5 BASIC5.65□□□□□ -1.5
CPS1P31327 MTND2P15-201ENST00000418575 892 ntBASIC5.65□□□□□ -1.5
CPS1P31327 AL035423.1-201ENST00000420331 213 ntBASIC5.65□□□□□ -1.5
CPS1P31327 AL591419.1-201ENST00000427423 339 ntBASIC5.65□□□□□ -1.5
CPS1P31327 AL583785.1-201ENST00000428006 512 ntTSL 2 BASIC5.65□□□□□ -1.5
CPS1P31327 AL512649.1-201ENST00000428997 581 ntBASIC5.65□□□□□ -1.5
CPS1P31327 AC112206.1-201ENST00000468416 477 ntBASIC5.65□□□□□ -1.5
CPS1P31327 NUDT6-203ENST00000502270 678 ntTSL 5 BASIC5.65□□□□□ -1.5
CPS1P31327 AC105460.2-202ENST00000502936 825 ntTSL 2 BASIC5.65□□□□□ -1.5
CPS1P31327 NDUFA5P2-201ENST00000519723 344 ntBASIC5.65□□□□□ -1.5
CPS1P31327 OPRM1-223ENST00000524163 1251 ntAPPRIS ALT1 TSL 1 (best) BASIC5.65□□□□□ -1.5
CPS1P31327 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC5.65□□□□□ -1.5
CPS1P31327 MIR8057-201ENST00000620957 69 ntBASIC5.65□□□□□ -1.5
CPS1P31327 ABBA01000935.2-201ENST00000637477 838 ntBASIC5.65□□□□□ -1.5
CPS1P31327 MPDZ-204ENST00000381022 7589 ntAPPRIS ALT2 TSL 5 BASIC5.65□□□□□ -1.5
CPS1P31327 U2SURP-208ENST00000473835 7276 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
CPS1P31327 SV2B-201ENST00000330276 11202 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
CPS1P31327 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
CPS1P31327 AL513548.1-201ENST00000562904 1724 ntBASIC5.65□□□□□ -1.51
CPS1P31327 PTPRB-202ENST00000334414 12316 ntAPPRIS P4 TSL 1 (best) BASIC5.65□□□□□ -1.51
CPS1P31327 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.51
CPS1P31327 GPBP1-205ENST00000511209 2243 ntAPPRIS ALT2 TSL 2 BASIC5.64□□□□□ -1.51
CPS1P31327 RNA5SP97-201ENST00000365006 84 ntBASIC5.64□□□□□ -1.51
CPS1P31327 RN7SKP284-201ENST00000411002 343 ntBASIC5.64□□□□□ -1.51
CPS1P31327 ST7-AS2-203ENST00000434993 918 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
CPS1P31327 RPL21P23-201ENST00000446654 460 ntBASIC5.64□□□□□ -1.51
CPS1P31327 AL360091.1-201ENST00000447949 496 ntTSL 5 BASIC5.64□□□□□ -1.51
CPS1P31327 SUN3-208ENST00000453192 801 ntTSL 5 BASIC5.64□□□□□ -1.51
CPS1P31327 AC092691.2-201ENST00000461787 803 ntBASIC5.64□□□□□ -1.51
CPS1P31327 AC012158.1-204ENST00000483430 465 ntBASIC5.64□□□□□ -1.51
CPS1P31327 RPL32P34-201ENST00000486380 400 ntBASIC5.64□□□□□ -1.51
CPS1P31327 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC5.64□□□□□ -1.51
CPS1P31327 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
CPS1P31327 AC089983.1-201ENST00000549807 701 ntTSL 3 BASIC5.64□□□□□ -1.51
CPS1P31327 VPS13C-204ENST00000395898 11012 ntAPPRIS ALT2 TSL 1 (best) BASIC5.64□□□□□ -1.51
CPS1P31327 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC5.64□□□□□ -1.51
CPS1P31327 NCOA1-206ENST00000407230 4745 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
CPS1P31327 GHR-207ENST00000537449 4419 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
CPS1P31327 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC5.64□□□□□ -1.51
CPS1P31327 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
CPS1P31327 ZC3H7A-202ENST00000396516 3845 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
CPS1P31327 EOGT-210ENST00000615922 1931 ntBASIC5.64□□□□□ -1.51
CPS1P31327 PSG1-201ENST00000244296 2276 ntAPPRIS P3 TSL 1 (best) BASIC5.64□□□□□ -1.51
CPS1P31327 RIMS2-201ENST00000262231 3854 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
CPS1P31327 DYRK1A-202ENST00000339659 8654 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
CPS1P31327 TMPRSS11F-201ENST00000356291 2088 ntAPPRIS P1 TSL 2 BASIC5.64□□□□□ -1.51
CPS1P31327 SMC2-202ENST00000374787 4266 ntAPPRIS P1 TSL 2 BASIC5.64□□□□□ -1.51
CPS1P31327 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
CPS1P31327 RN7SL429P-201ENST00000479090 223 ntBASIC5.64□□□□□ -1.51
CPS1P31327 RN7SL489P-201ENST00000486185 223 ntBASIC5.64□□□□□ -1.51
CPS1P31327 RN7SL327P-201ENST00000488659 223 ntBASIC5.64□□□□□ -1.51
CPS1P31327 OR5B10P-201ENST00000532869 642 ntBASIC5.64□□□□□ -1.51
CPS1P31327 ZNF682-204ENST00000593468 581 ntTSL 4 BASIC5.64□□□□□ -1.51
CPS1P31327 AC097505.1-201ENST00000610199 565 ntBASIC5.64□□□□□ -1.51
CPS1P31327 RN7SL853P-201ENST00000617250 223 ntBASIC5.64□□□□□ -1.51
CPS1P31327 AC243312.2-201ENST00000623340 601 ntBASIC5.64□□□□□ -1.51
CPS1P31327 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC5.64□□□□□ -1.51
CPS1P31327 ASXL3-201ENST00000269197 11399 ntAPPRIS P2 TSL 5 BASIC5.63□□□□□ -1.51
CPS1P31327 AF127577.4-201ENST00000432230 5929 ntTSL 5 BASIC5.63□□□□□ -1.51
CPS1P31327 DGKH-206ENST00000536612 3957 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
CPS1P31327 EEF1A1-211ENST00000615060 3508 ntTSL 5 BASIC5.63□□□□□ -1.51
CPS1P31327 PNLIPRP3-201ENST00000369230 2354 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
CPS1P31327 AC020637.1-201ENST00000546977 1447 ntTSL 5 BASIC5.63□□□□□ -1.51
CPS1P31327 DCDC1-203ENST00000406071 4758 ntAPPRIS P2 TSL 5 BASIC5.63□□□□□ -1.51
CPS1P31327 MAPK10-320ENST00000641462 6696 ntBASIC5.63□□□□□ -1.51
CPS1P31327 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC5.63□□□□□ -1.51
CPS1P31327 NOX4-205ENST00000424319 4184 ntTSL 5 BASIC5.63□□□□□ -1.51
CPS1P31327 TC2N-203ENST00000435962 5146 ntAPPRIS P1 TSL 2 BASIC5.63□□□□□ -1.51
CPS1P31327 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC5.63□□□□□ -1.51
CPS1P31327 LINC01748-204ENST00000635048 5678 ntTSL 5 BASIC5.63□□□□□ -1.51
CPS1P31327 AL161631.1-201ENST00000417933 486 ntBASIC5.63□□□□□ -1.51
CPS1P31327 Z97055.1-201ENST00000419730 712 ntBASIC5.63□□□□□ -1.51
CPS1P31327 TCEA1P2-201ENST00000420496 906 ntBASIC5.63□□□□□ -1.51
CPS1P31327 AL139247.1-201ENST00000422768 325 ntBASIC5.63□□□□□ -1.51
CPS1P31327 RPS4XP10-201ENST00000465034 731 ntBASIC5.63□□□□□ -1.51
CPS1P31327 RPL5P23-201ENST00000496040 868 ntBASIC5.63□□□□□ -1.51
CPS1P31327 MORF4L2P1-201ENST00000503761 858 ntBASIC5.63□□□□□ -1.51
CPS1P31327 AC100773.1-201ENST00000505409 520 ntTSL 5 BASIC5.63□□□□□ -1.51
CPS1P31327 AC073172.2-201ENST00000527770 571 ntTSL 4 BASIC5.63□□□□□ -1.51
CPS1P31327 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC5.63□□□□□ -1.51
CPS1P31327 MIR5187-201ENST00000583479 76 ntBASIC5.63□□□□□ -1.51
CPS1P31327 AC107993.1-201ENST00000591343 684 ntBASIC5.63□□□□□ -1.51
CPS1P31327 AC064801.1-201ENST00000612025 407 ntBASIC5.63□□□□□ -1.51
CPS1P31327 AC073530.2-201ENST00000623987 261 ntBASIC5.63□□□□□ -1.51
CPS1P31327 TTN-AS1-267ENST00000628826 662 ntTSL 5 BASIC5.63□□□□□ -1.51
CPS1P31327 KCNH5-201ENST00000322893 11290 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
CPS1P31327 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
CPS1P31327 TMEM30A-202ENST00000370050 3775 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
CPS1P31327 LINC01689-201ENST00000416218 2007 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
CPS1P31327 SPOCK3-225ENST00000535728 2007 ntAPPRIS ALT2 TSL 5 BASIC5.62□□□□□ -1.51
CPS1P31327 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
CPS1P31327 CCNE2-202ENST00000396133 1361 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
CPS1P31327 PMCHL2-202ENST00000450213 1917 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
CPS1P31327 FAM24A-201ENST00000368894 596 ntAPPRIS P1 TSL 3 BASIC5.62□□□□□ -1.51
CPS1P31327 MIR490-201ENST00000384865 128 ntBASIC5.62□□□□□ -1.51
CPS1P31327 TRAV9-2-201ENST00000390441 394 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 136 ms