Protein–RNA interactions for Protein: P12830

CDH1, Cadherin-1, humanhuman

Predictions only

Length 882 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1P12830 RPL35AP28-201ENST00000459730 331 ntBASIC4.56□□□□□ -1.68
CDH1P12830 LINC02428-201ENST00000508099 527 ntTSL 5 BASIC4.56□□□□□ -1.68
CDH1P12830 OR7H2P-201ENST00000513483 306 ntBASIC4.56□□□□□ -1.68
CDH1P12830 AC024132.3-201ENST00000513616 649 ntTSL 5 BASIC4.56□□□□□ -1.68
CDH1P12830 LINC02353-201ENST00000515181 849 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
CDH1P12830 HIGD1AP18-201ENST00000520730 278 ntBASIC4.56□□□□□ -1.68
CDH1P12830 AP001978.1-201ENST00000526851 834 ntTSL 2 BASIC4.56□□□□□ -1.68
CDH1P12830 AC104002.2-201ENST00000553919 318 ntTSL 5 BASIC4.56□□□□□ -1.68
CDH1P12830 MTND3P12-201ENST00000559068 328 ntBASIC4.56□□□□□ -1.68
CDH1P12830 FAM96A-206ENST00000559950 561 ntTSL 2 BASIC4.56□□□□□ -1.68
CDH1P12830 AC012170.3-201ENST00000560159 297 ntTSL 2 BASIC4.56□□□□□ -1.68
CDH1P12830 AC027455.1-201ENST00000574104 594 ntBASIC4.56□□□□□ -1.68
CDH1P12830 MIR4737-201ENST00000583979 81 ntBASIC4.56□□□□□ -1.68
CDH1P12830 AC022022.2-201ENST00000602989 360 ntBASIC4.56□□□□□ -1.68
CDH1P12830 AC024940.4-201ENST00000605507 246 ntBASIC4.56□□□□□ -1.68
CDH1P12830 AL008729.2-201ENST00000606393 473 ntBASIC4.56□□□□□ -1.68
CDH1P12830 AC011374.2-201ENST00000607135 526 ntBASIC4.56□□□□□ -1.68
CDH1P12830 AC091979.2-201ENST00000607514 214 ntBASIC4.56□□□□□ -1.68
CDH1P12830 AC009237.17-201ENST00000618111 748 ntBASIC4.56□□□□□ -1.68
CDH1P12830 AP004607.9-201ENST00000618202 316 ntBASIC4.56□□□□□ -1.68
CDH1P12830 AC006386.1-201ENST00000619436 415 ntBASIC4.56□□□□□ -1.68
CDH1P12830 Z99129.2-201ENST00000619967 314 ntBASIC4.56□□□□□ -1.68
CDH1P12830 SDAD1P1-202ENST00000524156 2051 ntBASIC4.56□□□□□ -1.68
CDH1P12830 PIK3CB-214ENST00000544716 3181 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
CDH1P12830 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
CDH1P12830 DEPDC1-202ENST00000456315 5331 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
CDH1P12830 IL1R1-204ENST00000409929 1858 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
CDH1P12830 MFSD8-220ENST00000641243 1422 ntBASIC4.55□□□□□ -1.68
CDH1P12830 OSBPL11-201ENST00000296220 4191 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
CDH1P12830 AL031320.2-201ENST00000591892 2079 ntTSL 5 BASIC4.55□□□□□ -1.68
CDH1P12830 CNGA1-209ENST00000544810 2722 ntAPPRIS ALT2 TSL 5 BASIC4.55□□□□□ -1.68
CDH1P12830 C1orf112-202ENST00000359326 4002 ntAPPRIS P3 TSL 1 (best) BASIC4.55□□□□□ -1.68
CDH1P12830 AC139713.2-209ENST00000509873 1303 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
CDH1P12830 OMG-201ENST00000247271 1947 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
CDH1P12830 EOGT-210ENST00000615922 1931 ntBASIC4.55□□□□□ -1.68
CDH1P12830 FAM107B-229ENST00000622567 3510 ntAPPRIS P1 TSL 2 BASIC4.55□□□□□ -1.68
CDH1P12830 OR4N5-201ENST00000333629 927 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
CDH1P12830 RN7SKP224-201ENST00000364140 325 ntBASIC4.55□□□□□ -1.68
CDH1P12830 RNU4-7P-201ENST00000364758 141 ntBASIC4.55□□□□□ -1.68
CDH1P12830 R3HCC1L-204ENST00000370586 941 ntTSL 3 BASIC4.55□□□□□ -1.68
CDH1P12830 IGKV5-2-201ENST00000390244 408 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
CDH1P12830 AL590762.2-201ENST00000395798 571 ntBASIC4.55□□□□□ -1.68
CDH1P12830 AL080315.1-201ENST00000406055 466 ntBASIC4.55□□□□□ -1.68
CDH1P12830 CACYBP-203ENST00000406752 243 ntTSL 5 BASIC4.55□□□□□ -1.68
CDH1P12830 RN7SKP100-201ENST00000411258 284 ntBASIC4.55□□□□□ -1.68
CDH1P12830 VDAC1P9-201ENST00000412766 841 ntBASIC4.55□□□□□ -1.68
CDH1P12830 AL591848.1-201ENST00000413092 322 ntBASIC4.55□□□□□ -1.68
CDH1P12830 LINC01359-201ENST00000415842 1157 ntTSL 2 BASIC4.55□□□□□ -1.68
CDH1P12830 DAB1-AS1-201ENST00000416598 1262 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
CDH1P12830 LINC01347-201ENST00000417964 355 ntBASIC4.55□□□□□ -1.68
CDH1P12830 OR2X1P-201ENST00000421144 687 ntBASIC4.55□□□□□ -1.68
CDH1P12830 RPL7P57-201ENST00000423238 740 ntBASIC4.55□□□□□ -1.68
CDH1P12830 BBIP1-203ENST00000423273 492 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
CDH1P12830 AL451042.1-201ENST00000426353 544 ntTSL 3 BASIC4.55□□□□□ -1.68
CDH1P12830 LINC01673-201ENST00000426418 468 ntTSL 3 BASIC4.55□□□□□ -1.68
CDH1P12830 AC092634.2-201ENST00000428146 1010 ntBASIC4.55□□□□□ -1.68
CDH1P12830 BBIP1-206ENST00000447005 727 ntAPPRIS P1 TSL 2 BASIC4.55□□□□□ -1.68
CDH1P12830 AC104651.2-201ENST00000447549 528 ntBASIC4.55□□□□□ -1.68
CDH1P12830 GTF2IP12-201ENST00000456547 356 ntBASIC4.55□□□□□ -1.68
CDH1P12830 AC092324.1-201ENST00000468671 324 ntBASIC4.55□□□□□ -1.68
CDH1P12830 MTCO3P35-201ENST00000485582 781 ntBASIC4.55□□□□□ -1.68
CDH1P12830 MTCYBP35-201ENST00000503630 1137 ntBASIC4.55□□□□□ -1.68
CDH1P12830 STMN1P2-201ENST00000508435 439 ntBASIC4.55□□□□□ -1.68
CDH1P12830 MEF2C-AS1-208ENST00000512585 741 ntTSL 5 BASIC4.55□□□□□ -1.68
CDH1P12830 RNU2-30P-201ENST00000516209 141 ntBASIC4.55□□□□□ -1.68
CDH1P12830 AC048387.1-201ENST00000518428 494 ntTSL 3 BASIC4.55□□□□□ -1.68
CDH1P12830 PCAT1-201ENST00000519319 734 ntTSL 2 BASIC4.55□□□□□ -1.68
CDH1P12830 AC099520.2-201ENST00000523745 567 ntTSL 3 BASIC4.55□□□□□ -1.68
CDH1P12830 CASP1-206ENST00000526568 1061 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
CDH1P12830 CASP1-216ENST00000534497 825 ntTSL 5 BASIC4.55□□□□□ -1.68
CDH1P12830 GABARAPL1-212ENST00000543602 653 ntTSL 5 BASIC4.55□□□□□ -1.68
CDH1P12830 AL133304.2-201ENST00000546376 886 ntTSL 2 BASIC4.55□□□□□ -1.68
CDH1P12830 AC068789.1-201ENST00000547942 577 ntTSL 2 BASIC4.55□□□□□ -1.68
CDH1P12830 UBE2FP2-201ENST00000566646 462 ntBASIC4.55□□□□□ -1.68
CDH1P12830 LINC01900-202ENST00000584898 603 ntTSL 5 BASIC4.55□□□□□ -1.68
CDH1P12830 AL121989.1-201ENST00000585888 746 ntTSL 3 BASIC4.55□□□□□ -1.68
CDH1P12830 VN1R87P-201ENST00000596706 487 ntBASIC4.55□□□□□ -1.68
CDH1P12830 AC004160.1-202ENST00000599917 578 ntTSL 5 BASIC4.55□□□□□ -1.68
CDH1P12830 Z82195.1-201ENST00000604558 398 ntBASIC4.55□□□□□ -1.68
CDH1P12830 AC079610.2-201ENST00000604818 690 ntBASIC4.55□□□□□ -1.68
CDH1P12830 AL391358.1-201ENST00000605342 190 ntBASIC4.55□□□□□ -1.68
CDH1P12830 LINC01440-205ENST00000608080 737 ntTSL 3 BASIC4.55□□□□□ -1.68
CDH1P12830 AL158196.1-201ENST00000616786 434 ntBASIC4.55□□□□□ -1.68
CDH1P12830 AC091953.3-201ENST00000623220 236 ntBASIC4.55□□□□□ -1.68
CDH1P12830 AC068057.2-201ENST00000624047 895 ntBASIC4.55□□□□□ -1.68
CDH1P12830 STAG2-203ENST00000371145 4393 ntAPPRIS ALT1 TSL 1 (best) BASIC4.55□□□□□ -1.68
CDH1P12830 RAP1B-201ENST00000250559 13438 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
CDH1P12830 RGS5-201ENST00000313961 5862 ntAPPRIS P3 TSL 1 (best) BASIC4.55□□□□□ -1.68
CDH1P12830 PTPN22-201ENST00000359785 3654 ntAPPRIS P2 TSL 1 (best) BASIC4.55□□□□□ -1.68
CDH1P12830 ZNF28-204ENST00000457749 4556 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
CDH1P12830 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC4.55□□□□□ -1.68
CDH1P12830 ADGRL3-202ENST00000504896 4816 ntTSL 5 BASIC4.55□□□□□ -1.68
CDH1P12830 KATNAL1-201ENST00000380615 7551 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
CDH1P12830 NFIB-211ENST00000606230 2311 ntTSL 5 BASIC4.55□□□□□ -1.68
CDH1P12830 XIRP2-207ENST00000628543 12182 ntTSL 5 BASIC4.55□□□□□ -1.68
CDH1P12830 STARD4-201ENST00000296632 4606 ntAPPRIS P1 TSL 2 BASIC4.55□□□□□ -1.68
CDH1P12830 PCDH15-211ENST00000395440 3177 ntTSL 5 BASIC4.55□□□□□ -1.68
CDH1P12830 DNAJC9-AS1-204ENST00000440197 2865 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
CDH1P12830 TMEM71-201ENST00000356838 1993 ntAPPRIS P3 TSL 1 (best) BASIC4.54□□□□□ -1.68
CDH1P12830 TMEM71-210ENST00000523829 1974 ntAPPRIS ALT2 TSL 5 BASIC4.54□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 89.9 ms