Protein–RNA interactions for Protein: P04004

VTN, Vitronectin, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTNP04004 OR14C36-201ENST00000317861 939 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
VTNP04004 OR8G1-201ENST00000341493 936 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
VTNP04004 OR6C74-201ENST00000343870 1105 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
VTNP04004 RNU1-20P-201ENST00000363314 162 ntBASIC4.68□□□□□ -1.66
VTNP04004 RNA5SP130-201ENST00000364431 114 ntBASIC4.68□□□□□ -1.66
VTNP04004 RNA5SP283-201ENST00000365604 119 ntBASIC4.68□□□□□ -1.66
VTNP04004 CXorf66-201ENST00000370540 1281 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
VTNP04004 DPRX-201ENST00000376650 648 ntAPPRIS P1 TSL 3 BASIC4.68□□□□□ -1.66
VTNP04004 AL078604.1-201ENST00000404609 466 ntBASIC4.68□□□□□ -1.66
VTNP04004 OR8G2P-201ENST00000412796 908 ntBASIC4.68□□□□□ -1.66
VTNP04004 AMMECR1LP1-201ENST00000415152 841 ntBASIC4.68□□□□□ -1.66
VTNP04004 EIF1P3-201ENST00000423841 334 ntBASIC4.68□□□□□ -1.66
VTNP04004 AC012519.1-201ENST00000424588 610 ntBASIC4.68□□□□□ -1.66
VTNP04004 AL606490.7-201ENST00000433136 191 ntBASIC4.68□□□□□ -1.66
VTNP04004 AC122718.1-201ENST00000439448 744 ntBASIC4.68□□□□□ -1.66
VTNP04004 AC006326.1-201ENST00000445465 787 ntBASIC4.68□□□□□ -1.66
VTNP04004 HSFY6P-201ENST00000445573 403 ntBASIC4.68□□□□□ -1.66
VTNP04004 AL445433.1-201ENST00000457507 257 ntBASIC4.68□□□□□ -1.66
VTNP04004 AL591473.1-201ENST00000464297 313 ntBASIC4.68□□□□□ -1.66
VTNP04004 FAM133DP-201ENST00000464802 691 ntBASIC4.68□□□□□ -1.66
VTNP04004 AF213884.1-201ENST00000488102 463 ntBASIC4.68□□□□□ -1.66
VTNP04004 LINC02005-201ENST00000498832 782 ntTSL 3 BASIC4.68□□□□□ -1.66
VTNP04004 HMGB1P3-201ENST00000502802 616 ntBASIC4.68□□□□□ -1.66
VTNP04004 LINC01612-201ENST00000504509 469 ntTSL 3 BASIC4.68□□□□□ -1.66
VTNP04004 PGBD4P4-201ENST00000509673 613 ntBASIC4.68□□□□□ -1.66
VTNP04004 LINC02505-203ENST00000515128 756 ntTSL 5 BASIC4.68□□□□□ -1.66
VTNP04004 AC018442.3-201ENST00000523025 183 ntBASIC4.68□□□□□ -1.66
VTNP04004 AC019227.1-201ENST00000526902 510 ntBASIC4.68□□□□□ -1.66
VTNP04004 NAV2-AS3-201ENST00000534036 598 ntTSL 3 BASIC4.68□□□□□ -1.66
VTNP04004 OSBPL9P3-201ENST00000534523 595 ntBASIC4.68□□□□□ -1.66
VTNP04004 EQTN-204ENST00000537675 879 ntAPPRIS ALT2 TSL 1 (best) BASIC4.68□□□□□ -1.66
VTNP04004 NOP56P3-201ENST00000549457 385 ntBASIC4.68□□□□□ -1.66
VTNP04004 LINC02326-201ENST00000552028 540 ntTSL 3 BASIC4.68□□□□□ -1.66
VTNP04004 LINC02301-201ENST00000553760 773 ntTSL 3 BASIC4.68□□□□□ -1.66
VTNP04004 AC106785.1-201ENST00000565935 262 ntBASIC4.68□□□□□ -1.66
VTNP04004 AC090125.1-201ENST00000581541 493 ntTSL 3 BASIC4.68□□□□□ -1.66
VTNP04004 AP005262.1-201ENST00000582646 997 ntBASIC4.68□□□□□ -1.66
VTNP04004 AC144521.1-201ENST00000607148 956 ntBASIC4.68□□□□□ -1.66
VTNP04004 AL096803.3-201ENST00000609032 532 ntBASIC4.68□□□□□ -1.66
VTNP04004 AL356274.1-201ENST00000617064 410 ntBASIC4.68□□□□□ -1.66
VTNP04004 AL161637.1-201ENST00000622380 412 ntBASIC4.68□□□□□ -1.66
VTNP04004 AC092159.4-201ENST00000624944 550 ntBASIC4.68□□□□□ -1.66
VTNP04004 LRP6-201ENST00000261349 10020 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
VTNP04004 ZNF12-203ENST00000404360 4474 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
VTNP04004 LINC01689-201ENST00000416218 2007 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
VTNP04004 EEF1A1P42-201ENST00000613436 1331 ntBASIC4.68□□□□□ -1.66
VTNP04004 C6orf10-210ENST00000617061 1904 ntAPPRIS ALT2 TSL 5 BASIC4.68□□□□□ -1.66
VTNP04004 PTPN13-201ENST00000316707 7546 ntAPPRIS ALT2 TSL 1 (best) BASIC4.67□□□□□ -1.66
VTNP04004 SCN2A-201ENST00000283256 8660 ntAPPRIS P5 TSL 1 (best) BASIC4.67□□□□□ -1.66
VTNP04004 HMBOX1-202ENST00000355231 1694 ntTSL 5 BASIC4.67□□□□□ -1.66
VTNP04004 RASAL2-203ENST00000462775 14453 ntAPPRIS ALT2 TSL 1 (best) BASIC4.67□□□□□ -1.66
VTNP04004 AC017002.4-201ENST00000604721 1525 ntBASIC4.67□□□□□ -1.66
VTNP04004 AC004803.1-201ENST00000503602 3207 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
VTNP04004 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
VTNP04004 OSGEPL1-201ENST00000264151 1885 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
VTNP04004 DDR2-202ENST00000367922 10160 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
VTNP04004 TCF4-281ENST00000636822 7640 ntTSL 5 BASIC4.67□□□□□ -1.66
VTNP04004 MT-TP-201ENST00000387461 68 ntBASIC4.67□□□□□ -1.66
VTNP04004 SNORD66.1-201ENST00000391230 76 ntBASIC4.67□□□□□ -1.66
VTNP04004 RPL31-206ENST00000409650 770 ntAPPRIS ALT1 TSL 2 BASIC4.67□□□□□ -1.66
VTNP04004 RN7SKP97-201ENST00000410966 333 ntBASIC4.67□□□□□ -1.66
VTNP04004 MYCBP2-AS1-201ENST00000422231 519 ntTSL 3 BASIC4.67□□□□□ -1.66
VTNP04004 POU6F2-AS1-201ENST00000433519 381 ntTSL 3 BASIC4.67□□□□□ -1.66
VTNP04004 AC093716.1-201ENST00000435923 377 ntBASIC4.67□□□□□ -1.66
VTNP04004 AL096855.1-202ENST00000444276 439 ntTSL 2 BASIC4.67□□□□□ -1.66
VTNP04004 RPS27AP15-201ENST00000447672 466 ntBASIC4.67□□□□□ -1.66
VTNP04004 AC010884.1-201ENST00000456519 642 ntTSL 3 BASIC4.67□□□□□ -1.66
VTNP04004 CABYRP1-201ENST00000465493 1045 ntBASIC4.67□□□□□ -1.66
VTNP04004 AC108022.1-201ENST00000493466 478 ntBASIC4.67□□□□□ -1.66
VTNP04004 AC016550.1-201ENST00000505348 785 ntBASIC4.67□□□□□ -1.66
VTNP04004 LINC02270-201ENST00000505386 610 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
VTNP04004 LINC01017-201ENST00000508823 768 ntTSL 3 BASIC4.67□□□□□ -1.66
VTNP04004 AC114284.1-201ENST00000511422 1114 ntTSL 2 BASIC4.67□□□□□ -1.66
VTNP04004 AC093770.1-201ENST00000511559 571 ntBASIC4.67□□□□□ -1.66
VTNP04004 RN7SKP46-201ENST00000515942 234 ntBASIC4.67□□□□□ -1.66
VTNP04004 RNU6-1102P-201ENST00000516149 96 ntBASIC4.67□□□□□ -1.66
VTNP04004 TATDN1-202ENST00000517678 815 ntTSL 3 BASIC4.67□□□□□ -1.66
VTNP04004 AC048387.1-201ENST00000518428 494 ntTSL 3 BASIC4.67□□□□□ -1.66
VTNP04004 TATDN1-206ENST00000519548 889 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
VTNP04004 VTA1P2-201ENST00000520205 911 ntBASIC4.67□□□□□ -1.66
VTNP04004 AC105233.3-201ENST00000531125 744 ntBASIC4.67□□□□□ -1.66
VTNP04004 LINC01495-201ENST00000532380 421 ntTSL 2 BASIC4.67□□□□□ -1.66
VTNP04004 AL590385.2-201ENST00000537821 553 ntTSL 5 BASIC4.67□□□□□ -1.66
VTNP04004 OR8R1P-201ENST00000543943 764 ntBASIC4.67□□□□□ -1.66
VTNP04004 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC4.67□□□□□ -1.66
VTNP04004 AC087888.1-201ENST00000550884 1254 ntBASIC4.67□□□□□ -1.66
VTNP04004 AL136298.1-201ENST00000557371 566 ntTSL 3 BASIC4.67□□□□□ -1.66
VTNP04004 LINC00254-201ENST00000563416 662 ntTSL 3 BASIC4.67□□□□□ -1.66
VTNP04004 AC006270.1-201ENST00000582889 478 ntTSL 3 BASIC4.67□□□□□ -1.66
VTNP04004 GXYLT1P5-202ENST00000618830 589 ntTSL 5 BASIC4.67□□□□□ -1.66
VTNP04004 AC107398.4-201ENST00000635489 765 ntTSL 2 BASIC4.67□□□□□ -1.66
VTNP04004 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC4.67□□□□□ -1.66
VTNP04004 AC139713.2-215ENST00000641428 5037 ntBASIC4.67□□□□□ -1.66
VTNP04004 AK9-204ENST00000424296 6326 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
VTNP04004 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
VTNP04004 AC010127.1-209ENST00000447809 2305 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
VTNP04004 ABCA13-204ENST00000435803 17184 ntAPPRIS P2 TSL 1 (best) BASIC4.67□□□□□ -1.66
VTNP04004 AGTR1-202ENST00000402260 2172 ntTSL 5 BASIC4.67□□□□□ -1.66
VTNP04004 CEP192-201ENST00000325971 7764 ntTSL 5 BASIC4.66□□□□□ -1.66
VTNP04004 MATR3-228ENST00000620916 3134 ntTSL 5 BASIC4.66□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 97.8 ms