Protein–RNA interactions for Protein: O95243

MBD4, Methyl-CpG-binding domain protein 4, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4O95243 LINC00622-201ENST00000562811 1570 ntBASIC5.41□□□□□ -1.54
MBD4O95243 PCDH11X-204ENST00000373088 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC5.41□□□□□ -1.54
MBD4O95243 ST7-212ENST00000422922 1887 ntTSL 5 BASIC5.41□□□□□ -1.54
MBD4O95243 CCSER2-210ENST00000543283 5888 ntTSL 2 BASIC5.41□□□□□ -1.54
MBD4O95243 AC092162.3-201ENST00000624511 1624 ntBASIC5.41□□□□□ -1.54
MBD4O95243 OMG-201ENST00000247271 1947 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
MBD4O95243 ZFAND6-223ENST00000616533 1653 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.54
MBD4O95243 EMSY-204ENST00000524490 4015 ntTSL 2 BASIC5.4□□□□□ -1.54
MBD4O95243 AC025031.4-201ENST00000621248 3271 ntBASIC5.4□□□□□ -1.54
MBD4O95243 HACD4-202ENST00000495827 8267 ntAPPRIS P1 TSL 2 BASIC5.4□□□□□ -1.54
MBD4O95243 LZTFL1-216ENST00000539217 4113 ntTSL 2 BASIC5.4□□□□□ -1.54
MBD4O95243 EPHA7-202ENST00000369303 6588 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
MBD4O95243 ENPP3-201ENST00000357639 3162 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
MBD4O95243 AL592494.2-201ENST00000425455 1548 ntBASIC5.4□□□□□ -1.54
MBD4O95243 UTS2B-201ENST00000340524 2395 ntAPPRIS P1 TSL 2 BASIC5.4□□□□□ -1.54
MBD4O95243 KLRF1-201ENST00000279545 1091 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
MBD4O95243 FAM3C2-201ENST00000312214 681 ntBASIC5.4□□□□□ -1.54
MBD4O95243 IL1RAPL2-201ENST00000344799 1290 ntTSL 5 BASIC5.4□□□□□ -1.54
MBD4O95243 RNA5SP27-201ENST00000363839 119 ntBASIC5.4□□□□□ -1.54
MBD4O95243 RNU1-130P-201ENST00000363930 160 ntBASIC5.4□□□□□ -1.54
MBD4O95243 RN7SKP224-201ENST00000364140 325 ntBASIC5.4□□□□□ -1.54
MBD4O95243 RNU6-481P-201ENST00000384194 107 ntBASIC5.4□□□□□ -1.54
MBD4O95243 AP002784.2-201ENST00000397300 549 ntBASIC5.4□□□□□ -1.54
MBD4O95243 SNRPFP1-201ENST00000414761 252 ntBASIC5.4□□□□□ -1.54
MBD4O95243 RPS20P1-201ENST00000434853 354 ntBASIC5.4□□□□□ -1.54
MBD4O95243 PTMAP3-201ENST00000447474 330 ntBASIC5.4□□□□□ -1.54
MBD4O95243 AL353148.1-203ENST00000452286 665 ntTSL 3 BASIC5.4□□□□□ -1.54
MBD4O95243 AL035407.2-201ENST00000454090 378 ntBASIC5.4□□□□□ -1.54
MBD4O95243 AC015908.1-201ENST00000478739 476 ntBASIC5.4□□□□□ -1.54
MBD4O95243 LINC00616-203ENST00000512536 568 ntTSL 4 BASIC5.4□□□□□ -1.54
MBD4O95243 SKP1-208ENST00000521216 899 ntAPPRIS ALT1 TSL 5 BASIC5.4□□□□□ -1.54
MBD4O95243 AP000827.1-201ENST00000527814 258 ntBASIC5.4□□□□□ -1.54
MBD4O95243 AC009643.1-201ENST00000532030 391 ntBASIC5.4□□□□□ -1.54
MBD4O95243 AC092112.1-201ENST00000538329 640 ntTSL 3 BASIC5.4□□□□□ -1.54
MBD4O95243 AP003717.3-201ENST00000544832 1180 ntBASIC5.4□□□□□ -1.54
MBD4O95243 AL355075.3-201ENST00000554678 492 ntTSL 5 BASIC5.4□□□□□ -1.54
MBD4O95243 CSNK1A1P1-202ENST00000563423 981 ntBASIC5.4□□□□□ -1.54
MBD4O95243 AC090618.1-201ENST00000571972 585 ntTSL 2 BASIC5.4□□□□□ -1.54
MBD4O95243 MTND4LP24-201ENST00000572277 291 ntBASIC5.4□□□□□ -1.54
MBD4O95243 RN7SL435P-201ENST00000584418 282 ntBASIC5.4□□□□□ -1.54
MBD4O95243 AC110743.1-201ENST00000584870 478 ntBASIC5.4□□□□□ -1.54
MBD4O95243 AC115085.1-201ENST00000588924 229 ntBASIC5.4□□□□□ -1.54
MBD4O95243 AC125494.3-201ENST00000602759 455 ntBASIC5.4□□□□□ -1.54
MBD4O95243 AC023762.1-201ENST00000603280 584 ntBASIC5.4□□□□□ -1.54
MBD4O95243 AL356218.2-201ENST00000605264 187 ntBASIC5.4□□□□□ -1.54
MBD4O95243 5_8S_rRNA.1-201ENST00000614365 152 ntBASIC5.4□□□□□ -1.54
MBD4O95243 AC018926.1-201ENST00000616335 435 ntBASIC5.4□□□□□ -1.54
MBD4O95243 KLRF1-208ENST00000617889 1241 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
MBD4O95243 AC073569.3-201ENST00000619055 682 ntBASIC5.4□□□□□ -1.54
MBD4O95243 MIR6810-201ENST00000622701 70 ntBASIC5.4□□□□□ -1.54
MBD4O95243 AL589740.1-205ENST00000635561 565 ntTSL 5 BASIC5.4□□□□□ -1.54
MBD4O95243 U6.107-201ENST00000637108 79 ntBASIC5.4□□□□□ -1.54
MBD4O95243 ETV1-205ENST00000405192 4402 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
MBD4O95243 AC022031.1-201ENST00000585985 2593 ntBASIC5.4□□□□□ -1.55
MBD4O95243 SPOCK3-225ENST00000535728 2007 ntAPPRIS ALT2 TSL 5 BASIC5.4□□□□□ -1.55
MBD4O95243 RAP1B-201ENST00000250559 13438 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
MBD4O95243 PLCB1-210ENST00000612075 6576 ntTSL 5 BASIC5.39□□□□□ -1.55
MBD4O95243 NBPF10-201ENST00000583866 13042 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
MBD4O95243 PPP1R9A-207ENST00000433881 9928 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
MBD4O95243 OR56A3-205ENST00000641905 4595 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
MBD4O95243 Z95327.2-201ENST00000414579 1873 ntBASIC5.39□□□□□ -1.55
MBD4O95243 RPS6KA5-207ENST00000614987 26795 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
MBD4O95243 OR52N4-201ENST00000317254 1037 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
MBD4O95243 PPP1R42-201ENST00000324682 1084 ntAPPRIS P2 TSL 1 (best) BASIC5.39□□□□□ -1.55
MBD4O95243 AL512430.2-201ENST00000406786 339 ntBASIC5.39□□□□□ -1.55
MBD4O95243 RN7SKP247-201ENST00000411094 308 ntBASIC5.39□□□□□ -1.55
MBD4O95243 DPYD-AS2-201ENST00000422259 788 ntTSL 3 BASIC5.39□□□□□ -1.55
MBD4O95243 AL356387.2-201ENST00000422272 243 ntBASIC5.39□□□□□ -1.55
MBD4O95243 LINC00458-202ENST00000427299 1030 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
MBD4O95243 AC073069.1-201ENST00000428657 441 ntBASIC5.39□□□□□ -1.55
MBD4O95243 SCP2-206ENST00000430330 938 ntTSL 2 BASIC5.39□□□□□ -1.55
MBD4O95243 AL451140.1-201ENST00000430534 371 ntTSL 3 BASIC5.39□□□□□ -1.55
MBD4O95243 TRBV8-2-201ENST00000475637 270 ntBASIC5.39□□□□□ -1.55
MBD4O95243 RPL23AP37-201ENST00000479658 549 ntBASIC5.39□□□□□ -1.55
MBD4O95243 MME-AS1-201ENST00000484721 828 ntTSL 2 BASIC5.39□□□□□ -1.55
MBD4O95243 AC092902.1-201ENST00000486999 259 ntBASIC5.39□□□□□ -1.55
MBD4O95243 TPT1P3-201ENST00000492841 512 ntBASIC5.39□□□□□ -1.55
MBD4O95243 AC104629.1-201ENST00000494226 508 ntBASIC5.39□□□□□ -1.55
MBD4O95243 CEACAMP10-202ENST00000495431 496 ntBASIC5.39□□□□□ -1.55
MBD4O95243 PPM1AP1-201ENST00000502740 1135 ntBASIC5.39□□□□□ -1.55
MBD4O95243 DNAL1-206ENST00000554871 632 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
MBD4O95243 FOPNL-207ENST00000575073 530 ntTSL 2 BASIC5.39□□□□□ -1.55
MBD4O95243 AJ003147.1-201ENST00000576762 454 ntTSL 3 BASIC5.39□□□□□ -1.55
MBD4O95243 AP001160.4-201ENST00000596971 382 ntBASIC5.39□□□□□ -1.55
MBD4O95243 AC092070.1-201ENST00000600257 359 ntTSL 3 BASIC5.39□□□□□ -1.55
MBD4O95243 AC090181.2-201ENST00000602975 672 ntBASIC5.39□□□□□ -1.55
MBD4O95243 AC021851.1-201ENST00000608537 1082 ntBASIC5.39□□□□□ -1.55
MBD4O95243 VN1R9P-201ENST00000614184 867 ntBASIC5.39□□□□□ -1.55
MBD4O95243 MIR6758-201ENST00000620653 63 ntBASIC5.39□□□□□ -1.55
MBD4O95243 AC024595.1-201ENST00000623088 387 ntBASIC5.39□□□□□ -1.55
MBD4O95243 AC093875.1-201ENST00000623688 504 ntBASIC5.39□□□□□ -1.55
MBD4O95243 DARS-AS1-230ENST00000631306 530 ntTSL 5 BASIC5.39□□□□□ -1.55
MBD4O95243 OR1S2-202ENST00000641683 941 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
MBD4O95243 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC5.39□□□□□ -1.55
MBD4O95243 TNRC6B-206ENST00000454349 18279 ntAPPRIS ALT2 TSL 2 BASIC5.39□□□□□ -1.55
MBD4O95243 AL365214.2-201ENST00000433684 1365 ntTSL 2 BASIC5.39□□□□□ -1.55
MBD4O95243 SCEL-205ENST00000535157 3096 ntAPPRIS ALT2 TSL 2 BASIC5.39□□□□□ -1.55
MBD4O95243 MAP2-202ENST00000360351 9711 ntAPPRIS P2 TSL 5 BASIC5.39□□□□□ -1.55
MBD4O95243 AC100871.1-201ENST00000507871 1456 ntBASIC5.39□□□□□ -1.55
MBD4O95243 OR2L13-201ENST00000358120 1942 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 71.5 ms