Protein–RNA interactions for Protein: O75150

RNF40, E3 ubiquitin-protein ligase BRE1B, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40O75150 BNIP3P25-201ENST00000596023 559 ntBASIC7.54□□□□□ -1.2
RNF40O75150 AC121334.2-201ENST00000605387 271 ntBASIC7.54□□□□□ -1.2
RNF40O75150 OR10AB1P-201ENST00000609613 938 ntBASIC7.54□□□□□ -1.2
RNF40O75150 AL121612.2-201ENST00000612261 482 ntBASIC7.54□□□□□ -1.2
RNF40O75150 AC023509.5-201ENST00000617434 807 ntBASIC7.54□□□□□ -1.2
RNF40O75150 AC244196.1-201ENST00000620569 409 ntAPPRIS P1 BASIC7.54□□□□□ -1.2
RNF40O75150 AC002115.2-201ENST00000640449 603 ntAPPRIS P1 TSL 5 BASIC7.54□□□□□ -1.2
RNF40O75150 SP110-201ENST00000258381 2426 ntAPPRIS P4 TSL 2 BASIC7.54□□□□□ -1.2
RNF40O75150 VNN3-202ENST00000367927 1717 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
RNF40O75150 HOMEZ-203ENST00000561013 3337 ntAPPRIS ALT2 TSL 2 BASIC7.54□□□□□ -1.2
RNF40O75150 JAML-206ENST00000526620 1383 ntAPPRIS ALT2 TSL 2 BASIC7.54□□□□□ -1.2
RNF40O75150 CCDC18-AS1-205ENST00000421202 2973 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
RNF40O75150 ARPP21-201ENST00000187397 3433 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
RNF40O75150 AL355306.2-202ENST00000634380 2281 ntTSL 5 BASIC7.54□□□□□ -1.2
RNF40O75150 NCOR1-205ENST00000395857 9501 ntTSL 5 BASIC7.54□□□□□ -1.2
RNF40O75150 LINGO2-202ENST00000379992 3044 ntAPPRIS P1 TSL 5 BASIC7.54□□□□□ -1.2
RNF40O75150 SGO1-AS1-205ENST00000634837 1677 ntTSL 5 BASIC7.54□□□□□ -1.2
RNF40O75150 CDKAL1-202ENST00000378610 3115 ntAPPRIS P1 TSL 2 BASIC7.54□□□□□ -1.2
RNF40O75150 RAG1-201ENST00000299440 6564 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
RNF40O75150 ST6GALNAC3-201ENST00000328299 6861 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
RNF40O75150 FOXM1-202ENST00000359843 3315 ntAPPRIS P4 TSL 1 (best) BASIC7.53□□□□□ -1.2
RNF40O75150 CFAP57-208ENST00000610710 4162 ntTSL 5 BASIC7.53□□□□□ -1.2
RNF40O75150 OAS2-201ENST00000342315 3613 ntAPPRIS P3 TSL 1 (best) BASIC7.53□□□□□ -1.2
RNF40O75150 RBPJP6-201ENST00000411556 1431 ntBASIC7.53□□□□□ -1.2
RNF40O75150 DDX10P2-201ENST00000417796 2614 ntBASIC7.53□□□□□ -1.2
RNF40O75150 UAP1-203ENST00000367925 2069 ntAPPRIS ALT1 TSL 5 BASIC7.53□□□□□ -1.2
RNF40O75150 ZNF585B-205ENST00000532828 6210 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
RNF40O75150 HERC4-211ENST00000492996 3385 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
RNF40O75150 GBA3-206ENST00000610628 2154 ntAPPRIS ALT2 TSL 5 BASIC7.53□□□□□ -1.2
RNF40O75150 PRND-201ENST00000305817 3980 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
RNF40O75150 ANO4-201ENST00000392977 3509 ntAPPRIS ALT2 TSL 2 BASIC7.53□□□□□ -1.2
RNF40O75150 LRRC37B-220ENST00000584368 2773 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
RNF40O75150 OR5A1-201ENST00000302030 1051 ntAPPRIS P1 BASIC7.53□□□□□ -1.2
RNF40O75150 RN7SKP184-201ENST00000362348 333 ntBASIC7.53□□□□□ -1.2
RNF40O75150 RNU4-48P-201ENST00000365559 182 ntBASIC7.53□□□□□ -1.2
RNF40O75150 CASP10-206ENST00000374650 1126 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
RNF40O75150 Y_RNA.512-201ENST00000384518 102 ntBASIC7.53□□□□□ -1.2
RNF40O75150 RNU6-952P-201ENST00000391164 108 ntBASIC7.53□□□□□ -1.2
RNF40O75150 SNRPD3-202ENST00000402849 567 ntTSL 2 BASIC7.53□□□□□ -1.2
RNF40O75150 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC7.53□□□□□ -1.2
RNF40O75150 AL589794.1-201ENST00000424971 390 ntBASIC7.53□□□□□ -1.2
RNF40O75150 AL161722.2-201ENST00000434731 981 ntBASIC7.53□□□□□ -1.2
RNF40O75150 AC244505.2-201ENST00000435089 759 ntBASIC7.53□□□□□ -1.2
RNF40O75150 AC079781.1-201ENST00000441505 394 ntBASIC7.53□□□□□ -1.2
RNF40O75150 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC7.53□□□□□ -1.2
RNF40O75150 AC114488.2-222ENST00000445166 362 ntTSL 3 BASIC7.53□□□□□ -1.2
RNF40O75150 AC004980.3-201ENST00000447046 365 ntBASIC7.53□□□□□ -1.2
RNF40O75150 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC7.53□□□□□ -1.2
RNF40O75150 RPL38P3-201ENST00000484463 213 ntBASIC7.53□□□□□ -1.2
RNF40O75150 AC104109.1-201ENST00000498563 436 ntBASIC7.53□□□□□ -1.2
RNF40O75150 AC092349.1-201ENST00000504903 310 ntBASIC7.53□□□□□ -1.2
RNF40O75150 B3GNTL1P1-201ENST00000509174 289 ntBASIC7.53□□□□□ -1.2
RNF40O75150 RRM2B-206ENST00000519317 420 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
RNF40O75150 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
RNF40O75150 THUMPD3-AS1-215ENST00000521609 793 ntTSL 5 BASIC7.53□□□□□ -1.2
RNF40O75150 COX6CP8-201ENST00000522620 226 ntBASIC7.53□□□□□ -1.2
RNF40O75150 AP000880.1-202ENST00000526487 588 ntTSL 3 BASIC7.53□□□□□ -1.2
RNF40O75150 AP000857.1-201ENST00000532151 543 ntBASIC7.53□□□□□ -1.2
RNF40O75150 OR7E161P-201ENST00000533722 967 ntBASIC7.53□□□□□ -1.2
RNF40O75150 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC7.53□□□□□ -1.2
RNF40O75150 AC023157.2-201ENST00000540596 141 ntBASIC7.53□□□□□ -1.2
RNF40O75150 AC103739.1-201ENST00000558389 474 ntTSL 3 BASIC7.53□□□□□ -1.2
RNF40O75150 ULK4P1-202ENST00000565174 503 ntBASIC7.53□□□□□ -1.2
RNF40O75150 MIR4424-201ENST00000585257 86 ntBASIC7.53□□□□□ -1.2
RNF40O75150 AC104695.3-201ENST00000604052 296 ntBASIC7.53□□□□□ -1.2
RNF40O75150 AC092960.1-201ENST00000604762 351 ntBASIC7.53□□□□□ -1.2
RNF40O75150 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC7.53□□□□□ -1.2
RNF40O75150 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC7.53□□□□□ -1.2
RNF40O75150 DMD-211ENST00000378707 7410 ntTSL 5 BASIC7.53□□□□□ -1.2
RNF40O75150 ZFP62-207ENST00000512132 4010 ntTSL 2 BASIC7.53□□□□□ -1.2
RNF40O75150 SLC17A4-202ENST00000397076 2331 ntTSL 2 BASIC7.53□□□□□ -1.2
RNF40O75150 OR5M2P-202ENST00000641241 4242 ntBASIC7.53□□□□□ -1.2
RNF40O75150 ACTR3BP5-201ENST00000448440 1479 ntBASIC7.53□□□□□ -1.2
RNF40O75150 PEAK1-202ENST00000558305 4644 ntTSL 4 BASIC7.53□□□□□ -1.2
RNF40O75150 SYNE2-216ENST00000555002 11532 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
RNF40O75150 AP4E1-203ENST00000560508 6653 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
RNF40O75150 PYHIN1-203ENST00000368140 2083 ntAPPRIS P4 TSL 1 (best) BASIC7.53□□□□□ -1.2
RNF40O75150 DEPDC1B-201ENST00000265036 2499 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
RNF40O75150 B3GALT5-203ENST00000380620 13170 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
RNF40O75150 CA1-222ENST00000523953 2785 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
RNF40O75150 C1orf27-202ENST00000367470 3754 ntTSL 5 BASIC7.53□□□□□ -1.2
RNF40O75150 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC7.52□□□□□ -1.2
RNF40O75150 OR7A10-202ENST00000641129 1847 ntAPPRIS P1 BASIC7.52□□□□□ -1.2
RNF40O75150 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC7.52□□□□□ -1.2
RNF40O75150 ABLIM1-202ENST00000369252 7690 ntTSL 5 BASIC7.52□□□□□ -1.21
RNF40O75150 ZNF658B-201ENST00000602828 3408 ntBASIC7.52□□□□□ -1.21
RNF40O75150 GRIK2-205ENST00000369138 4921 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
RNF40O75150 PROX1-AS1-202ENST00000433082 5266 ntTSL 5 BASIC7.52□□□□□ -1.21
RNF40O75150 AC110597.1-201ENST00000562669 3176 ntBASIC7.52□□□□□ -1.21
RNF40O75150 NFIA-204ENST00000371187 2683 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
RNF40O75150 FDFT1-222ENST00000538689 2289 ntTSL 2 BASIC7.52□□□□□ -1.21
RNF40O75150 AC093909.5-201ENST00000621839 1799 ntBASIC7.52□□□□□ -1.21
RNF40O75150 NLRP3P1-201ENST00000622303 1785 ntBASIC7.52□□□□□ -1.21
RNF40O75150 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC7.52□□□□□ -1.21
RNF40O75150 AC130360.2-201ENST00000533477 1556 ntBASIC7.52□□□□□ -1.21
RNF40O75150 MT1A-201ENST00000290705 396 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
RNF40O75150 RNU6-266P-201ENST00000364225 107 ntBASIC7.52□□□□□ -1.21
RNF40O75150 RNU4-66P-201ENST00000365199 138 ntBASIC7.52□□□□□ -1.21
RNF40O75150 AL109755.1-201ENST00000401791 649 ntBASIC7.52□□□□□ -1.21
RNF40O75150 AL096800.1-201ENST00000405326 893 ntBASIC7.52□□□□□ -1.21
Retrieved 100 of 98,524 protein–RNA pairs in 79.7 ms