Protein–RNA interactions for Protein: A0A096LP49

CCDC187, Coiled-coil domain-containing protein 187, humanhuman

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187A0A096LP49 TSPAN8-202ENST00000393330 1516 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
CCDC187A0A096LP49 SCN2A-203ENST00000375437 8792 ntAPPRIS ALT1 TSL 5 BASIC4.97□□□□□ -1.61
CCDC187A0A096LP49 LMO3-209ENST00000447609 3365 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
CCDC187A0A096LP49 ARHGAP28-205ENST00000531294 2171 ntAPPRIS ALT2 TSL 5 BASIC4.97□□□□□ -1.61
CCDC187A0A096LP49 ORC4-215ENST00000536575 6328 ntTSL 2 BASIC4.97□□□□□ -1.61
CCDC187A0A096LP49 AC019072.1-201ENST00000604535 1551 ntBASIC4.97□□□□□ -1.61
CCDC187A0A096LP49 OR10A5-201ENST00000299454 1054 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
CCDC187A0A096LP49 OR1L1-201ENST00000309623 933 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
CCDC187A0A096LP49 OR5H2-202ENST00000356526 930 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
CCDC187A0A096LP49 OR1L1-202ENST00000373686 1083 ntBASIC4.97□□□□□ -1.61
CCDC187A0A096LP49 MANSC4-201ENST00000381273 1023 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
CCDC187A0A096LP49 RNU6-317P-201ENST00000384031 107 ntBASIC4.97□□□□□ -1.61
CCDC187A0A096LP49 RNA5SP187-201ENST00000384400 119 ntBASIC4.97□□□□□ -1.61
CCDC187A0A096LP49 SFR1P1-201ENST00000403720 688 ntBASIC4.97□□□□□ -1.61
CCDC187A0A096LP49 Y_RNA.599-201ENST00000410489 109 ntBASIC4.97□□□□□ -1.61
CCDC187A0A096LP49 RNU6-575P-201ENST00000411326 105 ntBASIC4.97□□□□□ -1.61
CCDC187A0A096LP49 IQCA1-AS1-201ENST00000413353 489 ntTSL 3 BASIC4.97□□□□□ -1.61
CCDC187A0A096LP49 AF240627.1-201ENST00000416002 879 ntTSL 3 BASIC4.97□□□□□ -1.61
CCDC187A0A096LP49 CHEK2P3-201ENST00000416118 248 ntBASIC4.97□□□□□ -1.61
CCDC187A0A096LP49 AL590139.1-201ENST00000416267 400 ntBASIC4.97□□□□□ -1.61
CCDC187A0A096LP49 LANCL1-AS1-201ENST00000416344 714 ntTSL 3 BASIC4.97□□□□□ -1.61
CCDC187A0A096LP49 AL390036.1-201ENST00000419428 734 ntTSL 5 BASIC4.97□□□□□ -1.61
CCDC187A0A096LP49 MFSD13B-201ENST00000420133 1290 ntBASIC4.97□□□□□ -1.61
CCDC187A0A096LP49 MTCO1P3-201ENST00000429327 192 ntBASIC4.97□□□□□ -1.61
CCDC187A0A096LP49 RPL21P110-201ENST00000433345 446 ntBASIC4.97□□□□□ -1.61
CCDC187A0A096LP49 LINC01078-201ENST00000434832 387 ntTSL 5 BASIC4.97□□□□□ -1.61
CCDC187A0A096LP49 AC009299.3-203ENST00000435692 1096 ntTSL 5 BASIC4.97□□□□□ -1.61
CCDC187A0A096LP49 AL136140.1-201ENST00000436113 473 ntTSL 3 BASIC4.97□□□□□ -1.61
CCDC187A0A096LP49 GTF2IP7-202ENST00000436677 309 ntBASIC4.97□□□□□ -1.61
CCDC187A0A096LP49 GSTA7P-201ENST00000438425 448 ntBASIC4.97□□□□□ -1.61
CCDC187A0A096LP49 LINC00376-201ENST00000439454 693 ntTSL 5 BASIC4.97□□□□□ -1.61
CCDC187A0A096LP49 AL138878.2-201ENST00000440581 1241 ntBASIC4.97□□□□□ -1.61
CCDC187A0A096LP49 FGF7P5-201ENST00000441829 291 ntBASIC4.97□□□□□ -1.61
CCDC187A0A096LP49 AL354794.1-201ENST00000442103 516 ntTSL 3 BASIC4.97□□□□□ -1.61
CCDC187A0A096LP49 RPL21P133-201ENST00000443666 476 ntBASIC4.97□□□□□ -1.61
CCDC187A0A096LP49 MTND1P1-201ENST00000445453 368 ntBASIC4.97□□□□□ -1.61
CCDC187A0A096LP49 AL133260.2-201ENST00000445833 396 ntTSL 3 BASIC4.97□□□□□ -1.61
CCDC187A0A096LP49 HMGB1P48-201ENST00000446155 598 ntBASIC4.97□□□□□ -1.61
CCDC187A0A096LP49 AC044781.1-201ENST00000446193 570 ntTSL 3 BASIC4.97□□□□□ -1.61
CCDC187A0A096LP49 ARL13A-202ENST00000450049 1102 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
CCDC187A0A096LP49 AC234781.3-201ENST00000452540 973 ntBASIC4.97□□□□□ -1.61
CCDC187A0A096LP49 NECAP1P2-201ENST00000455668 727 ntBASIC4.97□□□□□ -1.61
CCDC187A0A096LP49 AL160162.1-201ENST00000456715 442 ntTSL 3 BASIC4.97□□□□□ -1.61
CCDC187A0A096LP49 ATG12P2-201ENST00000456830 416 ntBASIC4.97□□□□□ -1.61
CCDC187A0A096LP49 AC011979.1-201ENST00000472300 483 ntBASIC4.97□□□□□ -1.61
CCDC187A0A096LP49 AL161747.1-201ENST00000480068 358 ntBASIC4.97□□□□□ -1.61
CCDC187A0A096LP49 GAPDHP39-201ENST00000481866 979 ntBASIC4.97□□□□□ -1.61
CCDC187A0A096LP49 AC140172.1-201ENST00000502928 141 ntBASIC4.97□□□□□ -1.61
CCDC187A0A096LP49 AC104071.1-201ENST00000505636 602 ntTSL 3 BASIC4.97□□□□□ -1.61
CCDC187A0A096LP49 FABP5P12-201ENST00000515543 389 ntBASIC4.97□□□□□ -1.61
CCDC187A0A096LP49 AC026719.2-201ENST00000515656 295 ntTSL 3 BASIC4.97□□□□□ -1.61
CCDC187A0A096LP49 SEPT10P1-201ENST00000517342 1162 ntBASIC4.97□□□□□ -1.61
CCDC187A0A096LP49 IGHVIII-38-1-201ENST00000521454 282 ntBASIC4.97□□□□□ -1.61
CCDC187A0A096LP49 AC021006.3-201ENST00000530771 192 ntBASIC4.97□□□□□ -1.61
CCDC187A0A096LP49 AC068643.2-201ENST00000547418 852 ntTSL 5 BASIC4.97□□□□□ -1.61
CCDC187A0A096LP49 AC013417.1-201ENST00000549896 271 ntTSL 5 BASIC4.97□□□□□ -1.61
CCDC187A0A096LP49 NBEAP1-201ENST00000554452 979 ntBASIC4.97□□□□□ -1.61
CCDC187A0A096LP49 AC009117.1-201ENST00000563948 554 ntBASIC4.97□□□□□ -1.61
CCDC187A0A096LP49 AC063944.1-210ENST00000593837 519 ntTSL 5 BASIC4.97□□□□□ -1.61
CCDC187A0A096LP49 AP005137.2-201ENST00000609238 400 ntBASIC4.97□□□□□ -1.61
CCDC187A0A096LP49 AL161616.1-201ENST00000611867 286 ntBASIC4.97□□□□□ -1.61
CCDC187A0A096LP49 AC090246.1-201ENST00000616499 426 ntBASIC4.97□□□□□ -1.61
CCDC187A0A096LP49 AC131159.1-201ENST00000621854 213 ntBASIC4.97□□□□□ -1.61
CCDC187A0A096LP49 AC135068.5-201ENST00000624197 983 ntBASIC4.97□□□□□ -1.61
CCDC187A0A096LP49 AP003400.3-201ENST00000624904 346 ntBASIC4.97□□□□□ -1.61
CCDC187A0A096LP49 NEK3-211ENST00000629912 141 ntTSL 5 BASIC4.97□□□□□ -1.61
CCDC187A0A096LP49 STX3-208ENST00000641815 3236 ntBASIC4.97□□□□□ -1.61
CCDC187A0A096LP49 ZNF248-201ENST00000357328 4795 ntAPPRIS P1 TSL 2 BASIC4.97□□□□□ -1.61
CCDC187A0A096LP49 NPSR1-AS1-202ENST00000419766 4821 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
CCDC187A0A096LP49 GHR-207ENST00000537449 4419 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
CCDC187A0A096LP49 NSD1-202ENST00000354179 12195 ntTSL 5 BASIC4.97□□□□□ -1.61
CCDC187A0A096LP49 ZNF143-201ENST00000299606 2562 ntTSL 5 BASIC4.97□□□□□ -1.61
CCDC187A0A096LP49 GTF2H1-204ENST00000524753 1510 ntTSL 3 BASIC4.97□□□□□ -1.61
CCDC187A0A096LP49 ZBTB44-210ENST00000530205 2179 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
CCDC187A0A096LP49 NUDCD1-202ENST00000427660 2098 ntTSL 1 (best) BASIC4.96□□□□□ -1.61
CCDC187A0A096LP49 ACSL5-202ENST00000354655 3351 ntAPPRIS P1 TSL 2 BASIC4.96□□□□□ -1.61
CCDC187A0A096LP49 DOPEY1-202ENST00000349129 8210 ntAPPRIS P3 TSL 1 (best) BASIC4.96□□□□□ -1.61
CCDC187A0A096LP49 AP005901.5-201ENST00000545779 1796 ntBASIC4.96□□□□□ -1.61
CCDC187A0A096LP49 FAM197Y3-202ENST00000427622 2325 ntTSL 5 BASIC4.96□□□□□ -1.61
CCDC187A0A096LP49 FAM197Y7-202ENST00000433321 2325 ntTSL 2 BASIC4.96□□□□□ -1.61
CCDC187A0A096LP49 FAM170B-AS1-203ENST00000442525 2000 ntTSL 2 BASIC4.96□□□□□ -1.62
CCDC187A0A096LP49 HTR1F-201ENST00000319595 3140 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
CCDC187A0A096LP49 MBNL1-203ENST00000324196 5225 ntTSL 5 BASIC4.96□□□□□ -1.62
CCDC187A0A096LP49 NCOA3-201ENST00000371997 6750 ntAPPRIS ALT2 TSL 1 (best) BASIC4.96□□□□□ -1.62
CCDC187A0A096LP49 PDCD1LG2-201ENST00000397747 2365 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
CCDC187A0A096LP49 VCAM1-202ENST00000347652 2812 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
CCDC187A0A096LP49 AC092681.1-201ENST00000297369 291 ntBASIC4.96□□□□□ -1.62
CCDC187A0A096LP49 MAX-203ENST00000341653 330 ntTSL 2 BASIC4.96□□□□□ -1.62
CCDC187A0A096LP49 OR5H2-201ENST00000355273 945 ntBASIC4.96□□□□□ -1.62
CCDC187A0A096LP49 RNU6-707P-201ENST00000364647 95 ntBASIC4.96□□□□□ -1.62
CCDC187A0A096LP49 RNVU1-6-201ENST00000364688 164 ntBASIC4.96□□□□□ -1.62
CCDC187A0A096LP49 RNA5SP90-201ENST00000364801 99 ntBASIC4.96□□□□□ -1.62
CCDC187A0A096LP49 C1orf54-202ENST00000369099 600 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
CCDC187A0A096LP49 DEFB136-201ENST00000382209 237 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
CCDC187A0A096LP49 Y_RNA.465-201ENST00000384293 102 ntBASIC4.96□□□□□ -1.62
CCDC187A0A096LP49 AC093719.1-202ENST00000392735 373 ntBASIC4.96□□□□□ -1.62
CCDC187A0A096LP49 AL138880.1-201ENST00000405824 642 ntBASIC4.96□□□□□ -1.62
CCDC187A0A096LP49 AL356131.1-201ENST00000405826 414 ntBASIC4.96□□□□□ -1.62
CCDC187A0A096LP49 RNU2-50P-201ENST00000410494 143 ntBASIC4.96□□□□□ -1.62
CCDC187A0A096LP49 AC008060.2-201ENST00000415333 468 ntTSL 3 BASIC4.96□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 76.6 ms