Protein–RNA interactions for Protein: Q9UPM6

LHX6, LIM/homeobox protein Lhx6, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX6Q9UPM6 AL353151.1-201ENST00000402406 604 ntBASIC7.29□□□□□ -1.24
LHX6Q9UPM6 BMS1P22-201ENST00000414726 313 ntBASIC7.29□□□□□ -1.24
LHX6Q9UPM6 RPL23AP22-201ENST00000437556 453 ntBASIC7.29□□□□□ -1.24
LHX6Q9UPM6 GHRL-210ENST00000449238 440 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
LHX6Q9UPM6 CMAHP-203ENST00000458373 1101 ntTSL 5 BASIC7.29□□□□□ -1.24
LHX6Q9UPM6 AC021382.1-201ENST00000483523 359 ntBASIC7.29□□□□□ -1.24
LHX6Q9UPM6 AC069499.1-201ENST00000489433 509 ntBASIC7.29□□□□□ -1.24
LHX6Q9UPM6 RPL7P23-201ENST00000493874 747 ntBASIC7.29□□□□□ -1.24
LHX6Q9UPM6 AC025524.2-202ENST00000523042 535 ntTSL 4 BASIC7.29□□□□□ -1.24
LHX6Q9UPM6 MRPL40P1-201ENST00000542687 604 ntBASIC7.29□□□□□ -1.24
LHX6Q9UPM6 LRP1-AS-201ENST00000554476 325 ntTSL 3 BASIC7.29□□□□□ -1.24
LHX6Q9UPM6 AC048383.1-201ENST00000558226 527 ntTSL 4 BASIC7.29□□□□□ -1.24
LHX6Q9UPM6 AC090607.2-201ENST00000560331 695 ntBASIC7.29□□□□□ -1.24
LHX6Q9UPM6 DNM1P31-201ENST00000564149 696 ntBASIC7.29□□□□□ -1.24
LHX6Q9UPM6 AC138035.1-203ENST00000604354 1066 ntTSL 2 BASIC7.29□□□□□ -1.24
LHX6Q9UPM6 AC009570.1-201ENST00000609599 745 ntBASIC7.29□□□□□ -1.24
LHX6Q9UPM6 UQCRC2-213ENST00000630839 535 ntTSL 4 BASIC7.29□□□□□ -1.24
LHX6Q9UPM6 GOLT1B-210ENST00000631252 223 ntTSL 3 BASIC7.29□□□□□ -1.24
LHX6Q9UPM6 U6.106-201ENST00000636360 105 ntBASIC7.29□□□□□ -1.24
LHX6Q9UPM6 FRYL-210ENST00000507711 5277 ntTSL 2 BASIC7.29□□□□□ -1.24
LHX6Q9UPM6 MEIOB-205ENST00000470044 1857 ntTSL 2 BASIC7.29□□□□□ -1.24
LHX6Q9UPM6 ALG2-202ENST00000319033 1627 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
LHX6Q9UPM6 SLC9A6-214ENST00000637581 4872 ntTSL 5 BASIC7.29□□□□□ -1.24
LHX6Q9UPM6 EIF4E3-204ENST00000425534 9949 ntAPPRIS P1 TSL 2 BASIC7.29□□□□□ -1.24
LHX6Q9UPM6 AC022784.6-204ENST00000520390 3442 ntTSL 2 BASIC7.29□□□□□ -1.24
LHX6Q9UPM6 AC011447.6-201ENST00000623510 2598 ntBASIC7.29□□□□□ -1.24
LHX6Q9UPM6 STC1-201ENST00000290271 3883 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
LHX6Q9UPM6 ADCY10P1-203ENST00000567255 4569 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
LHX6Q9UPM6 TRIM51HP-202ENST00000530412 1823 ntBASIC7.29□□□□□ -1.24
LHX6Q9UPM6 POLR1B-204ENST00000417433 3836 ntTSL 2 BASIC7.29□□□□□ -1.24
LHX6Q9UPM6 GPR156-201ENST00000315843 4193 ntAPPRIS P3 TSL 1 (best) BASIC7.29□□□□□ -1.24
LHX6Q9UPM6 CTNND1-230ENST00000532245 5655 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
LHX6Q9UPM6 RBFOX2-205ENST00000405409 6932 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
LHX6Q9UPM6 AL359220.1-202ENST00000500036 4499 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
LHX6Q9UPM6 ZMYND8-201ENST00000262975 4139 ntAPPRIS ALT2 TSL 1 (best) BASIC7.29□□□□□ -1.24
LHX6Q9UPM6 AMPD1-201ENST00000369538 2392 ntAPPRIS ALT2 TSL 2 BASIC7.28□□□□□ -1.24
LHX6Q9UPM6 G3BP2-203ENST00000395719 4217 ntAPPRIS P4 TSL 1 (best) BASIC7.28□□□□□ -1.24
LHX6Q9UPM6 ZNF33CP-201ENST00000432492 2030 ntBASIC7.28□□□□□ -1.24
LHX6Q9UPM6 MTTP-208ENST00000511045 3154 ntTSL 2 BASIC7.28□□□□□ -1.24
LHX6Q9UPM6 MRPL22-206ENST00000522038 3162 ntAPPRIS ALT1 TSL 5 BASIC7.28□□□□□ -1.24
LHX6Q9UPM6 LINC02208-201ENST00000506769 2803 ntTSL 5 BASIC7.28□□□□□ -1.24
LHX6Q9UPM6 NCKAP1L-201ENST00000293373 9016 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
LHX6Q9UPM6 BRCA1-208ENST00000468300 3273 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
LHX6Q9UPM6 AL589642.1-201ENST00000430787 2582 ntTSL 2 BASIC7.28□□□□□ -1.24
LHX6Q9UPM6 PPHLN1-207ENST00000432191 3377 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
LHX6Q9UPM6 MRPL22-201ENST00000265229 3035 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
LHX6Q9UPM6 ZNF189-202ENST00000339664 3021 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
LHX6Q9UPM6 KAT6A-201ENST00000265713 9153 ntAPPRIS P3 TSL 1 (best) BASIC7.28□□□□□ -1.24
LHX6Q9UPM6 PARP9-202ENST00000462315 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC7.28□□□□□ -1.24
LHX6Q9UPM6 HRH1-201ENST00000397056 4711 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
LHX6Q9UPM6 NPIPB5-207ENST00000451409 3660 ntAPPRIS ALT2 TSL 5 BASIC7.28□□□□□ -1.24
LHX6Q9UPM6 PHF2P2-202ENST00000444553 2865 ntBASIC7.28□□□□□ -1.24
LHX6Q9UPM6 ADAM3A-202ENST00000460383 2528 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
LHX6Q9UPM6 CASC19-204ENST00000641001 2055 ntBASIC7.28□□□□□ -1.24
LHX6Q9UPM6 COPG1-201ENST00000314797 3078 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
LHX6Q9UPM6 AL137058.3-201ENST00000624531 3099 ntBASIC7.28□□□□□ -1.24
LHX6Q9UPM6 PSMC2-201ENST00000292644 2637 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
LHX6Q9UPM6 OR6N1-203ENST00000641846 2640 ntAPPRIS P1 BASIC7.28□□□□□ -1.24
LHX6Q9UPM6 PALLD-206ENST00000505667 3637 ntAPPRIS ALT2 TSL 1 (best) BASIC7.28□□□□□ -1.24
LHX6Q9UPM6 NR2F1-AS1-208ENST00000606233 2264 ntTSL 2 BASIC7.28□□□□□ -1.24
LHX6Q9UPM6 CTNND1-207ENST00000426142 5800 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
LHX6Q9UPM6 Y_RNA.234-201ENST00000364409 97 ntBASIC7.28□□□□□ -1.24
LHX6Q9UPM6 TEX35-205ENST00000367643 802 ntAPPRIS ALT2 TSL 2 BASIC7.28□□□□□ -1.24
LHX6Q9UPM6 RNU6-44P-201ENST00000384045 107 ntBASIC7.28□□□□□ -1.24
LHX6Q9UPM6 RNU6-921P-201ENST00000384361 107 ntBASIC7.28□□□□□ -1.24
LHX6Q9UPM6 IGHV2-26-201ENST00000390611 381 ntAPPRIS P1 BASIC7.28□□□□□ -1.24
LHX6Q9UPM6 SNORA16.2-201ENST00000390991 127 ntBASIC7.28□□□□□ -1.24
LHX6Q9UPM6 AL080315.1-201ENST00000406055 466 ntBASIC7.28□□□□□ -1.24
LHX6Q9UPM6 RNU6-394P-201ENST00000410735 107 ntBASIC7.28□□□□□ -1.24
LHX6Q9UPM6 AC068286.1-201ENST00000416173 467 ntTSL 4 BASIC7.28□□□□□ -1.24
LHX6Q9UPM6 AC140479.3-201ENST00000418944 1126 ntBASIC7.28□□□□□ -1.24
LHX6Q9UPM6 EIF4EP2-201ENST00000422816 654 ntBASIC7.28□□□□□ -1.24
LHX6Q9UPM6 AC019211.1-201ENST00000432993 754 ntTSL 3 BASIC7.28□□□□□ -1.24
LHX6Q9UPM6 CR769767.1-201ENST00000436337 346 ntBASIC7.28□□□□□ -1.24
LHX6Q9UPM6 AC106869.1-202ENST00000441997 604 ntTSL 4 BASIC7.28□□□□□ -1.24
LHX6Q9UPM6 MTND6P5-201ENST00000448266 512 ntBASIC7.28□□□□□ -1.24
LHX6Q9UPM6 RPL31P11-202ENST00000454082 372 ntBASIC7.28□□□□□ -1.24
LHX6Q9UPM6 TRBV5-4-201ENST00000454561 544 ntAPPRIS P1 BASIC7.28□□□□□ -1.24
LHX6Q9UPM6 RPSAP7-201ENST00000456871 885 ntBASIC7.28□□□□□ -1.24
LHX6Q9UPM6 snoU13.8-201ENST00000458890 104 ntBASIC7.28□□□□□ -1.24
LHX6Q9UPM6 OARD1-209ENST00000471367 401 ntTSL 2 BASIC7.28□□□□□ -1.24
LHX6Q9UPM6 RN7SL335P-201ENST00000482790 304 ntBASIC7.28□□□□□ -1.24
LHX6Q9UPM6 AC110792.1-201ENST00000491826 472 ntBASIC7.28□□□□□ -1.24
LHX6Q9UPM6 AC004069.1-201ENST00000504082 549 ntTSL 4 BASIC7.28□□□□□ -1.24
LHX6Q9UPM6 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC7.28□□□□□ -1.24
LHX6Q9UPM6 RNU6-911P-201ENST00000516523 104 ntBASIC7.28□□□□□ -1.24
LHX6Q9UPM6 Y_RNA.713-201ENST00000517013 96 ntBASIC7.28□□□□□ -1.24
LHX6Q9UPM6 AC090458.1-202ENST00000530387 462 ntTSL 5 BASIC7.28□□□□□ -1.24
LHX6Q9UPM6 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC7.28□□□□□ -1.24
LHX6Q9UPM6 AC009511.1-201ENST00000543527 191 ntTSL 5 BASIC7.28□□□□□ -1.24
LHX6Q9UPM6 AC010333.1-201ENST00000563116 563 ntTSL 4 BASIC7.28□□□□□ -1.24
LHX6Q9UPM6 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC7.28□□□□□ -1.24
LHX6Q9UPM6 MRPS5P4-201ENST00000592830 325 ntBASIC7.28□□□□□ -1.24
LHX6Q9UPM6 MIR663AHG-213ENST00000596767 837 ntTSL 5 BASIC7.28□□□□□ -1.24
LHX6Q9UPM6 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC7.28□□□□□ -1.24
LHX6Q9UPM6 AL138900.3-201ENST00000607010 629 ntTSL 2 BASIC7.28□□□□□ -1.24
LHX6Q9UPM6 Metazoa_SRP.35-201ENST00000611402 288 ntBASIC7.28□□□□□ -1.24
LHX6Q9UPM6 PPP3CB-AS1-213ENST00000620302 501 ntTSL 5 BASIC7.28□□□□□ -1.24
LHX6Q9UPM6 OPALIN-205ENST00000536387 3392 ntTSL 3 BASIC7.28□□□□□ -1.24
LHX6Q9UPM6 UTY-210ENST00000538878 6574 ntAPPRIS ALT2 TSL 1 (best) BASIC7.28□□□□□ -1.24
Retrieved 100 of 98,524 protein–RNA pairs in 135.9 ms