Protein–RNA interactions for Protein: Q9NX36

DNAJC28, DnaJ homolog subfamily C member 28, humanhuman

Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNAJC28Q9NX36 AC015522.1-201ENST00000523678 640 ntTSL 3 BASIC5.52□□□□□ -1.53
DNAJC28Q9NX36 AC103855.1-201ENST00000525926 564 ntTSL 2 BASIC5.52□□□□□ -1.53
DNAJC28Q9NX36 REXO2-218ENST00000544827 880 ntTSL 3 BASIC5.52□□□□□ -1.53
DNAJC28Q9NX36 AC024909.2-201ENST00000553035 286 ntBASIC5.52□□□□□ -1.53
DNAJC28Q9NX36 NR2F2-AS1-208ENST00000560395 441 ntTSL 5 BASIC5.52□□□□□ -1.53
DNAJC28Q9NX36 AC012404.1-201ENST00000560876 476 ntTSL 3 BASIC5.52□□□□□ -1.53
DNAJC28Q9NX36 AC113418.1-201ENST00000569928 517 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
DNAJC28Q9NX36 AC135050.5-201ENST00000576336 543 ntTSL 4 BASIC5.52□□□□□ -1.53
DNAJC28Q9NX36 AC016839.1-201ENST00000578162 867 ntBASIC5.52□□□□□ -1.53
DNAJC28Q9NX36 AP005120.1-201ENST00000579321 352 ntTSL 3 BASIC5.52□□□□□ -1.53
DNAJC28Q9NX36 AP000811.1-201ENST00000603803 651 ntBASIC5.52□□□□□ -1.53
DNAJC28Q9NX36 AC018714.1-201ENST00000605028 208 ntBASIC5.52□□□□□ -1.53
DNAJC28Q9NX36 AC112220.3-201ENST00000605502 502 ntBASIC5.52□□□□□ -1.53
DNAJC28Q9NX36 AC015804.1-201ENST00000622935 435 ntBASIC5.52□□□□□ -1.53
DNAJC28Q9NX36 SLC8A1-AS1-239ENST00000631142 623 ntTSL 5 BASIC5.52□□□□□ -1.53
DNAJC28Q9NX36 MKKS-204ENST00000639674 192 ntBASIC5.52□□□□□ -1.53
DNAJC28Q9NX36 PHTF2-207ENST00000424760 1977 ntTSL 2 BASIC5.52□□□□□ -1.53
DNAJC28Q9NX36 AL022311.1-201ENST00000623726 19416 ntBASIC5.52□□□□□ -1.53
DNAJC28Q9NX36 AC020633.1-201ENST00000468439 2247 ntBASIC5.52□□□□□ -1.53
DNAJC28Q9NX36 EFCAB3-201ENST00000305286 1542 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
DNAJC28Q9NX36 ZNF569-203ENST00000392150 1918 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
DNAJC28Q9NX36 VIM-AS1-201ENST00000437232 1351 ntTSL 2 BASIC5.52□□□□□ -1.53
DNAJC28Q9NX36 CPNE4-214ENST00000617767 3556 ntTSL 2 BASIC5.52□□□□□ -1.53
DNAJC28Q9NX36 AL360270.2-201ENST00000562952 5985 ntBASIC5.52□□□□□ -1.53
DNAJC28Q9NX36 AC092162.3-201ENST00000624511 1624 ntBASIC5.52□□□□□ -1.53
DNAJC28Q9NX36 PDE7A-201ENST00000379419 2425 ntAPPRIS P3 TSL 2 BASIC5.52□□□□□ -1.53
DNAJC28Q9NX36 KBTBD8-201ENST00000417314 4680 ntAPPRIS P1 TSL 2 BASIC5.51□□□□□ -1.53
DNAJC28Q9NX36 PHTF2-208ENST00000450574 2516 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
DNAJC28Q9NX36 DCN-202ENST00000393155 2133 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
DNAJC28Q9NX36 GVINP1-202ENST00000531871 7271 ntBASIC5.51□□□□□ -1.53
DNAJC28Q9NX36 PPP1R9A-206ENST00000433360 5369 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
DNAJC28Q9NX36 DLG1-210ENST00000422288 2854 ntTSL 5 BASIC5.51□□□□□ -1.53
DNAJC28Q9NX36 PTPRD-213ENST00000537002 8224 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
DNAJC28Q9NX36 ERP27-201ENST00000266397 2096 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
DNAJC28Q9NX36 AC134882.1-201ENST00000603738 1676 ntBASIC5.51□□□□□ -1.53
DNAJC28Q9NX36 SYCP1-201ENST00000369518 3452 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
DNAJC28Q9NX36 RAD17-220ENST00000616683 3057 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
DNAJC28Q9NX36 TAS2R8-201ENST00000240615 1243 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
DNAJC28Q9NX36 SNORA70-201ENST00000384436 135 ntBASIC5.51□□□□□ -1.53
DNAJC28Q9NX36 Y_RNA.560-201ENST00000384689 102 ntBASIC5.51□□□□□ -1.53
DNAJC28Q9NX36 MIR551A-201ENST00000385042 96 ntBASIC5.51□□□□□ -1.53
DNAJC28Q9NX36 MIR223-201ENST00000385204 110 ntBASIC5.51□□□□□ -1.53
DNAJC28Q9NX36 AL031577.2-201ENST00000404133 280 ntBASIC5.51□□□□□ -1.53
DNAJC28Q9NX36 AL590609.3-201ENST00000411815 210 ntTSL 3 BASIC5.51□□□□□ -1.53
DNAJC28Q9NX36 AL031674.1-202ENST00000413070 465 ntTSL 3 BASIC5.51□□□□□ -1.53
DNAJC28Q9NX36 AC093157.2-201ENST00000414686 671 ntTSL 5 BASIC5.51□□□□□ -1.53
DNAJC28Q9NX36 LINC01934-201ENST00000414750 391 ntTSL 3 BASIC5.51□□□□□ -1.53
DNAJC28Q9NX36 LINC01427-201ENST00000420928 504 ntTSL 3 BASIC5.51□□□□□ -1.53
DNAJC28Q9NX36 RIMKLBP2-201ENST00000424737 654 ntBASIC5.51□□□□□ -1.53
DNAJC28Q9NX36 RPP40P1-201ENST00000426762 456 ntBASIC5.51□□□□□ -1.53
DNAJC28Q9NX36 RPL31P54-201ENST00000429803 370 ntBASIC5.51□□□□□ -1.53
DNAJC28Q9NX36 RPS26P40-201ENST00000435209 294 ntBASIC5.51□□□□□ -1.53
DNAJC28Q9NX36 AC129850.1-201ENST00000436203 508 ntBASIC5.51□□□□□ -1.53
DNAJC28Q9NX36 LINC00484-204ENST00000439438 454 ntTSL 3 BASIC5.51□□□□□ -1.53
DNAJC28Q9NX36 RAB11AP1-201ENST00000442978 646 ntBASIC5.51□□□□□ -1.53
DNAJC28Q9NX36 AL591363.1-201ENST00000450091 483 ntBASIC5.51□□□□□ -1.53
DNAJC28Q9NX36 DNAJB5P1-201ENST00000454004 806 ntBASIC5.51□□□□□ -1.53
DNAJC28Q9NX36 RPL7P1-201ENST00000468161 747 ntBASIC5.51□□□□□ -1.53
DNAJC28Q9NX36 RPL7P9-201ENST00000468715 747 ntBASIC5.51□□□□□ -1.53
DNAJC28Q9NX36 UBA52P3-201ENST00000491303 382 ntBASIC5.51□□□□□ -1.53
DNAJC28Q9NX36 AC080014.1-201ENST00000496877 1201 ntBASIC5.51□□□□□ -1.53
DNAJC28Q9NX36 AC008517.1-201ENST00000502383 585 ntTSL 4 BASIC5.51□□□□□ -1.53
DNAJC28Q9NX36 AC024558.1-201ENST00000505008 528 ntBASIC5.51□□□□□ -1.53
DNAJC28Q9NX36 AC112198.1-201ENST00000505369 1220 ntBASIC5.51□□□□□ -1.53
DNAJC28Q9NX36 AC108866.1-202ENST00000511064 573 ntTSL 4 BASIC5.51□□□□□ -1.53
DNAJC28Q9NX36 HMGB3P13-201ENST00000511263 607 ntBASIC5.51□□□□□ -1.53
DNAJC28Q9NX36 AC108471.2-204ENST00000526807 784 ntTSL 5 BASIC5.51□□□□□ -1.53
DNAJC28Q9NX36 PMS2P3-207ENST00000529061 717 ntBASIC5.51□□□□□ -1.53
DNAJC28Q9NX36 AP001970.1-201ENST00000531681 701 ntTSL 3 BASIC5.51□□□□□ -1.53
DNAJC28Q9NX36 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
DNAJC28Q9NX36 AL049779.2-201ENST00000553847 315 ntBASIC5.51□□□□□ -1.53
DNAJC28Q9NX36 AC025580.2-202ENST00000558536 715 ntTSL 3 BASIC5.51□□□□□ -1.53
DNAJC28Q9NX36 AC015660.3-201ENST00000559569 198 ntTSL 3 BASIC5.51□□□□□ -1.53
DNAJC28Q9NX36 AC130371.1-204ENST00000576197 401 ntTSL 3 BASIC5.51□□□□□ -1.53
DNAJC28Q9NX36 MIR4311-201ENST00000580794 100 ntBASIC5.51□□□□□ -1.53
DNAJC28Q9NX36 AC090403.1-204ENST00000582893 572 ntTSL 4 BASIC5.51□□□□□ -1.53
DNAJC28Q9NX36 AC005702.2-201ENST00000591035 481 ntAPPRIS P1 TSL 3 BASIC5.51□□□□□ -1.53
DNAJC28Q9NX36 AC009237.13-201ENST00000603193 276 ntBASIC5.51□□□□□ -1.53
DNAJC28Q9NX36 AC099566.1-205ENST00000609411 657 ntTSL 5 BASIC5.51□□□□□ -1.53
DNAJC28Q9NX36 HULC.1-201ENST00000612720 240 ntBASIC5.51□□□□□ -1.53
DNAJC28Q9NX36 AL118522.2-201ENST00000616045 615 ntBASIC5.51□□□□□ -1.53
DNAJC28Q9NX36 Metazoa_SRP.181-201ENST00000616636 288 ntBASIC5.51□□□□□ -1.53
DNAJC28Q9NX36 AC079906.1-201ENST00000621214 815 ntTSL 3 BASIC5.51□□□□□ -1.53
DNAJC28Q9NX36 AL358154.1-201ENST00000627075 444 ntTSL 3 BASIC5.51□□□□□ -1.53
DNAJC28Q9NX36 AC099654.6-201ENST00000636487 512 ntBASIC5.51□□□□□ -1.53
DNAJC28Q9NX36 CASC19-222ENST00000641321 1173 ntBASIC5.51□□□□□ -1.53
DNAJC28Q9NX36 SAMMSON-227ENST00000642114 1199 ntBASIC5.51□□□□□ -1.53
DNAJC28Q9NX36 AC008505.1-201ENST00000637582 2025 ntTSL 5 BASIC5.51□□□□□ -1.53
DNAJC28Q9NX36 KCNJ1-206ENST00000440599 2539 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
DNAJC28Q9NX36 CXCL11-201ENST00000306621 1606 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
DNAJC28Q9NX36 AC099329.2-203ENST00000471537 3605 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
DNAJC28Q9NX36 TRIM51GP-201ENST00000534741 1350 ntBASIC5.51□□□□□ -1.53
DNAJC28Q9NX36 CPSF2-201ENST00000298875 13035 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
DNAJC28Q9NX36 TTC41P-203ENST00000548527 1475 ntTSL 5 BASIC5.51□□□□□ -1.53
DNAJC28Q9NX36 TMEM99-201ENST00000301665 2058 ntAPPRIS P2 TSL 2 BASIC5.51□□□□□ -1.53
DNAJC28Q9NX36 IPCEF1-203ENST00000422970 3267 ntAPPRIS ALT2 TSL 1 (best) BASIC5.5□□□□□ -1.53
DNAJC28Q9NX36 SLC12A6-216ENST00000560164 3744 ntTSL 2 BASIC5.5□□□□□ -1.53
DNAJC28Q9NX36 CR381670.1-201ENST00000624291 1693 ntBASIC5.5□□□□□ -1.53
DNAJC28Q9NX36 DSE-204ENST00000452085 10586 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
DNAJC28Q9NX36 FKBP7-204ENST00000424785 2834 ntAPPRIS P3 TSL 1 (best) BASIC5.5□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 77.3 ms