Protein–RNA interactions for Protein: Q93096

PTP4A1, Protein tyrosine phosphatase type IVA 1, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1Q93096 AL159990.2-201ENST00000436491 337 ntTSL 3 BASIC4.36□□□□□ -1.71
PTP4A1Q93096 Z93403.1-202ENST00000440002 713 ntTSL 3 BASIC4.36□□□□□ -1.71
PTP4A1Q93096 AC099654.1-201ENST00000442649 407 ntTSL 3 BASIC4.36□□□□□ -1.71
PTP4A1Q93096 EEF1B2P5-201ENST00000444820 548 ntBASIC4.36□□□□□ -1.71
PTP4A1Q93096 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC4.36□□□□□ -1.71
PTP4A1Q93096 MTND1P33-201ENST00000446251 917 ntBASIC4.36□□□□□ -1.71
PTP4A1Q93096 TMEM246-AS1-204ENST00000450109 538 ntTSL 3 BASIC4.36□□□□□ -1.71
PTP4A1Q93096 CEACAMP6-201ENST00000452007 574 ntBASIC4.36□□□□□ -1.71
PTP4A1Q93096 AL359715.2-201ENST00000452402 682 ntTSL 2 BASIC4.36□□□□□ -1.71
PTP4A1Q93096 AC092832.2-201ENST00000456621 389 ntTSL 2 BASIC4.36□□□□□ -1.71
PTP4A1Q93096 snoU13.7-201ENST00000459220 104 ntBASIC4.36□□□□□ -1.71
PTP4A1Q93096 RPL37P6-202ENST00000464216 403 ntBASIC4.36□□□□□ -1.71
PTP4A1Q93096 AC004884.2-201ENST00000476569 546 ntTSL 4 BASIC4.36□□□□□ -1.71
PTP4A1Q93096 MORC1-AS1-201ENST00000480826 564 ntTSL 2 BASIC4.36□□□□□ -1.71
PTP4A1Q93096 RN7SL97P-201ENST00000486780 299 ntBASIC4.36□□□□□ -1.71
PTP4A1Q93096 AC109462.1-201ENST00000491087 368 ntBASIC4.36□□□□□ -1.71
PTP4A1Q93096 OR5H3P-201ENST00000502817 919 ntBASIC4.36□□□□□ -1.71
PTP4A1Q93096 HOMER1-204ENST00000508576 815 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
PTP4A1Q93096 COX6B1P5-201ENST00000509843 249 ntBASIC4.36□□□□□ -1.71
PTP4A1Q93096 RNU6-488P-201ENST00000515918 99 ntBASIC4.36□□□□□ -1.71
PTP4A1Q93096 RNA5SP392-201ENST00000516905 112 ntBASIC4.36□□□□□ -1.71
PTP4A1Q93096 LONRF1-203ENST00000525024 841 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
PTP4A1Q93096 AC124293.1-201ENST00000530034 493 ntBASIC4.36□□□□□ -1.71
PTP4A1Q93096 AP003557.1-201ENST00000531715 585 ntTSL 3 BASIC4.36□□□□□ -1.71
PTP4A1Q93096 OR7E128P-201ENST00000532736 1024 ntBASIC4.36□□□□□ -1.71
PTP4A1Q93096 OR8L1P-201ENST00000534005 955 ntBASIC4.36□□□□□ -1.71
PTP4A1Q93096 AC092490.3-201ENST00000545370 572 ntBASIC4.36□□□□□ -1.71
PTP4A1Q93096 DNAL1-205ENST00000554339 548 ntTSL 5 BASIC4.36□□□□□ -1.71
PTP4A1Q93096 LINC01859-201ENST00000565584 1024 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
PTP4A1Q93096 AC017100.2-201ENST00000584628 355 ntBASIC4.36□□□□□ -1.71
PTP4A1Q93096 AC006116.3-201ENST00000592968 361 ntBASIC4.36□□□□□ -1.71
PTP4A1Q93096 Z98949.1-211ENST00000596813 773 ntTSL 5 BASIC4.36□□□□□ -1.71
PTP4A1Q93096 AC091979.2-201ENST00000607514 214 ntBASIC4.36□□□□□ -1.71
PTP4A1Q93096 AC015813.4-201ENST00000610469 179 ntBASIC4.36□□□□□ -1.71
PTP4A1Q93096 CRNDE-213ENST00000635991 546 ntTSL 5 BASIC4.36□□□□□ -1.71
PTP4A1Q93096 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
PTP4A1Q93096 ZFX-203ENST00000379177 7558 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
PTP4A1Q93096 ZRANB2-201ENST00000254821 2821 ntAPPRIS ALT2 TSL 1 (best) BASIC4.36□□□□□ -1.71
PTP4A1Q93096 CREM-206ENST00000354759 1589 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
PTP4A1Q93096 HAT1-201ENST00000264108 1626 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
PTP4A1Q93096 LGI1-228ENST00000637689 1802 ntTSL 5 BASIC4.35□□□□□ -1.71
PTP4A1Q93096 ZEB1-205ENST00000446923 6267 ntAPPRIS ALT2 TSL 5 BASIC4.35□□□□□ -1.71
PTP4A1Q93096 KCNU1-201ENST00000399881 3695 ntAPPRIS P1 TSL 2 BASIC4.35□□□□□ -1.71
PTP4A1Q93096 CLEC4A-201ENST00000229332 1281 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
PTP4A1Q93096 OR5F1-201ENST00000278409 945 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
PTP4A1Q93096 OR6C4-201ENST00000394256 1046 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
PTP4A1Q93096 RN7SKP273-201ENST00000411392 314 ntBASIC4.35□□□□□ -1.71
PTP4A1Q93096 AC073071.1-201ENST00000412410 388 ntTSL 3 BASIC4.35□□□□□ -1.71
PTP4A1Q93096 RPL21P108-201ENST00000413857 481 ntBASIC4.35□□□□□ -1.71
PTP4A1Q93096 IFNAR2-206ENST00000413881 710 ntTSL 5 BASIC4.35□□□□□ -1.71
PTP4A1Q93096 ARSD-AS1-201ENST00000414053 816 ntTSL 2 BASIC4.35□□□□□ -1.71
PTP4A1Q93096 UBE2V1P1-201ENST00000430836 445 ntBASIC4.35□□□□□ -1.71
PTP4A1Q93096 AC009226.1-201ENST00000432413 539 ntTSL 3 BASIC4.35□□□□□ -1.71
PTP4A1Q93096 AC004824.1-201ENST00000439577 311 ntTSL 5 BASIC4.35□□□□□ -1.71
PTP4A1Q93096 AC018467.1-203ENST00000440785 506 ntTSL 3 BASIC4.35□□□□□ -1.71
PTP4A1Q93096 RPL29P29-201ENST00000448725 423 ntBASIC4.35□□□□□ -1.71
PTP4A1Q93096 AC012355.1-201ENST00000450290 769 ntTSL 3 BASIC4.35□□□□□ -1.71
PTP4A1Q93096 AL121877.1-201ENST00000453704 622 ntBASIC4.35□□□□□ -1.71
PTP4A1Q93096 AC096543.1-201ENST00000455038 823 ntTSL 3 BASIC4.35□□□□□ -1.71
PTP4A1Q93096 AL049548.1-201ENST00000458194 385 ntTSL 2 BASIC4.35□□□□□ -1.71
PTP4A1Q93096 RNU6ATAC28P-201ENST00000459249 118 ntBASIC4.35□□□□□ -1.71
PTP4A1Q93096 CREM-226ENST00000469949 721 ntTSL 3 BASIC4.35□□□□□ -1.71
PTP4A1Q93096 AC015724.1-201ENST00000478577 156 ntBASIC4.35□□□□□ -1.71
PTP4A1Q93096 RN7SL558P-201ENST00000497468 299 ntBASIC4.35□□□□□ -1.71
PTP4A1Q93096 AC093763.2-201ENST00000505334 1223 ntBASIC4.35□□□□□ -1.71
PTP4A1Q93096 SNX5P1-201ENST00000505757 1041 ntBASIC4.35□□□□□ -1.71
PTP4A1Q93096 THAP6-209ENST00000507556 1134 ntTSL 2 BASIC4.35□□□□□ -1.71
PTP4A1Q93096 AC121161.1-201ENST00000510606 652 ntBASIC4.35□□□□□ -1.71
PTP4A1Q93096 PTGES3P3-201ENST00000511479 482 ntBASIC4.35□□□□□ -1.71
PTP4A1Q93096 RN7SKP277-201ENST00000516895 283 ntBASIC4.35□□□□□ -1.71
PTP4A1Q93096 RNU6-709P-201ENST00000517257 104 ntBASIC4.35□□□□□ -1.71
PTP4A1Q93096 SOD1P3-201ENST00000518682 454 ntBASIC4.35□□□□□ -1.71
PTP4A1Q93096 OR5M2P-201ENST00000529003 936 ntBASIC4.35□□□□□ -1.71
PTP4A1Q93096 AC009509.1-201ENST00000536317 1110 ntTSL 5 BASIC4.35□□□□□ -1.71
PTP4A1Q93096 OR11J2P-201ENST00000555298 907 ntBASIC4.35□□□□□ -1.71
PTP4A1Q93096 LINC02490-201ENST00000559915 601 ntTSL 3 BASIC4.35□□□□□ -1.71
PTP4A1Q93096 AC055855.3-201ENST00000564269 578 ntTSL 2 BASIC4.35□□□□□ -1.71
PTP4A1Q93096 AC113418.1-201ENST00000569928 517 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
PTP4A1Q93096 TVP23CP2-201ENST00000571473 623 ntBASIC4.35□□□□□ -1.71
PTP4A1Q93096 SNORA74C-1-201ENST00000580726 201 ntBASIC4.35□□□□□ -1.71
PTP4A1Q93096 AC005324.5-201ENST00000584540 571 ntTSL 5 BASIC4.35□□□□□ -1.71
PTP4A1Q93096 BNIP3P4-201ENST00000604946 565 ntBASIC4.35□□□□□ -1.71
PTP4A1Q93096 AC010424.2-201ENST00000607594 443 ntBASIC4.35□□□□□ -1.71
PTP4A1Q93096 AC112503.1-201ENST00000608436 391 ntBASIC4.35□□□□□ -1.71
PTP4A1Q93096 RDM1-215ENST00000612980 501 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
PTP4A1Q93096 ZNF75A-210ENST00000617839 1225 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
PTP4A1Q93096 AL022401.1-201ENST00000619498 108 ntBASIC4.35□□□□□ -1.71
PTP4A1Q93096 AC244472.1-201ENST00000620773 347 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
PTP4A1Q93096 AC012414.7-202ENST00000622705 1090 ntBASIC4.35□□□□□ -1.71
PTP4A1Q93096 LAMTOR5-AS1-233ENST00000625451 470 ntTSL 5 BASIC4.35□□□□□ -1.71
PTP4A1Q93096 LINC01739-205ENST00000641890 573 ntBASIC4.35□□□□□ -1.71
PTP4A1Q93096 SPEF2-216ENST00000637569 7350 ntAPPRIS ALT2 TSL 5 BASIC4.35□□□□□ -1.71
PTP4A1Q93096 KIF3A-203ENST00000403231 2181 ntTSL 2 BASIC4.35□□□□□ -1.71
PTP4A1Q93096 RPS6KA5-207ENST00000614987 26795 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
PTP4A1Q93096 OR11H5P-202ENST00000641612 1325 ntBASIC4.35□□□□□ -1.71
PTP4A1Q93096 IPO5-201ENST00000261574 6003 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
PTP4A1Q93096 MS4A1-202ENST00000389939 3372 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
PTP4A1Q93096 MTCO1P14-201ENST00000441695 1559 ntBASIC4.35□□□□□ -1.71
PTP4A1Q93096 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
PTP4A1Q93096 PCDH15-211ENST00000395440 3177 ntTSL 5 BASIC4.35□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 136.5 ms