Protein–RNA interactions for Protein: Q8WV48

CCDC107, Coiled-coil domain-containing protein 107, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC107Q8WV48 ERGIC2-201ENST00000360150 5014 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
CCDC107Q8WV48 DLD-204ENST00000437604 1859 ntTSL 2 BASIC4.21□□□□□ -1.74
CCDC107Q8WV48 SDCBP-213ENST00000630925 2076 ntTSL 5 BASIC4.21□□□□□ -1.74
CCDC107Q8WV48 MYB-226ENST00000528774 2277 ntAPPRIS ALT1 TSL 1 (best) BASIC4.21□□□□□ -1.74
CCDC107Q8WV48 TES-202ENST00000393481 2763 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
CCDC107Q8WV48 TENM1-201ENST00000371130 12875 ntAPPRIS P3 TSL 1 (best) BASIC4.21□□□□□ -1.74
CCDC107Q8WV48 ZNF534-204ENST00000433050 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC4.21□□□□□ -1.74
CCDC107Q8WV48 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
CCDC107Q8WV48 TPRG1-201ENST00000345063 5479 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
CCDC107Q8WV48 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
CCDC107Q8WV48 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC4.2□□□□□ -1.74
CCDC107Q8WV48 IL21-201ENST00000264497 629 ntAPPRIS P3 TSL 1 (best) BASIC4.2□□□□□ -1.74
CCDC107Q8WV48 SNRPE-201ENST00000367208 355 ntTSL 2 BASIC4.2□□□□□ -1.74
CCDC107Q8WV48 RNU6-224P-201ENST00000384055 107 ntBASIC4.2□□□□□ -1.74
CCDC107Q8WV48 RNU6-549P-201ENST00000384433 107 ntBASIC4.2□□□□□ -1.74
CCDC107Q8WV48 MIR143-201ENST00000385300 106 ntBASIC4.2□□□□□ -1.74
CCDC107Q8WV48 NUDT19P3-201ENST00000404698 555 ntBASIC4.2□□□□□ -1.74
CCDC107Q8WV48 RN7SKP114-201ENST00000410327 279 ntBASIC4.2□□□□□ -1.74
CCDC107Q8WV48 GSTM3P2-201ENST00000412746 530 ntBASIC4.2□□□□□ -1.74
CCDC107Q8WV48 MORF4L2-205ENST00000423833 717 ntTSL 5 BASIC4.2□□□□□ -1.74
CCDC107Q8WV48 NANOGP5-201ENST00000424456 877 ntBASIC4.2□□□□□ -1.74
CCDC107Q8WV48 AL009174.1-201ENST00000426577 416 ntBASIC4.2□□□□□ -1.74
CCDC107Q8WV48 RPL7P4-203ENST00000430239 730 ntBASIC4.2□□□□□ -1.74
CCDC107Q8WV48 AF127577.2-201ENST00000436429 824 ntTSL 3 BASIC4.2□□□□□ -1.74
CCDC107Q8WV48 AC072062.1-204ENST00000437897 1132 ntTSL 5 BASIC4.2□□□□□ -1.74
CCDC107Q8WV48 AC015971.1-202ENST00000439077 514 ntTSL 3 BASIC4.2□□□□□ -1.74
CCDC107Q8WV48 ACTR3P2-201ENST00000439585 1257 ntBASIC4.2□□□□□ -1.74
CCDC107Q8WV48 AL391987.1-201ENST00000441025 200 ntBASIC4.2□□□□□ -1.74
CCDC107Q8WV48 AC096644.1-201ENST00000446169 390 ntTSL 3 BASIC4.2□□□□□ -1.74
CCDC107Q8WV48 Z99127.1-201ENST00000452442 670 ntTSL 5 BASIC4.2□□□□□ -1.74
CCDC107Q8WV48 AL691482.1-201ENST00000453255 87 ntBASIC4.2□□□□□ -1.74
CCDC107Q8WV48 ATP5A1P7-201ENST00000453978 1279 ntBASIC4.2□□□□□ -1.74
CCDC107Q8WV48 RN7SL817P-201ENST00000480777 288 ntBASIC4.2□□□□□ -1.74
CCDC107Q8WV48 UBA52P7-201ENST00000486088 380 ntBASIC4.2□□□□□ -1.74
CCDC107Q8WV48 RPS27P23-201ENST00000487608 251 ntBASIC4.2□□□□□ -1.74
CCDC107Q8WV48 RPS4XP18-201ENST00000495480 763 ntBASIC4.2□□□□□ -1.74
CCDC107Q8WV48 HPRT1P2-201ENST00000505250 544 ntBASIC4.2□□□□□ -1.74
CCDC107Q8WV48 AC110760.1-201ENST00000513770 590 ntTSL 3 BASIC4.2□□□□□ -1.74
CCDC107Q8WV48 TMPRSS11BNL-205ENST00000514295 1262 ntBASIC4.2□□□□□ -1.74
CCDC107Q8WV48 snoZ278.1-201ENST00000517059 112 ntBASIC4.2□□□□□ -1.74
CCDC107Q8WV48 Y_RNA.719-201ENST00000517156 106 ntBASIC4.2□□□□□ -1.74
CCDC107Q8WV48 TATDN1-202ENST00000517678 815 ntTSL 3 BASIC4.2□□□□□ -1.74
CCDC107Q8WV48 MAL2-208ENST00000523307 556 ntTSL 4 BASIC4.2□□□□□ -1.74
CCDC107Q8WV48 LRRC6P1-201ENST00000532188 885 ntBASIC4.2□□□□□ -1.74
CCDC107Q8WV48 CYCSP28-201ENST00000534284 321 ntBASIC4.2□□□□□ -1.74
CCDC107Q8WV48 AC130404.1-201ENST00000539362 739 ntTSL 2 BASIC4.2□□□□□ -1.74
CCDC107Q8WV48 ZNF84-212ENST00000542874 540 ntTSL 5 BASIC4.2□□□□□ -1.74
CCDC107Q8WV48 TMEM191C-213ENST00000545656 574 ntAPPRIS ALT2 BASIC4.2□□□□□ -1.74
CCDC107Q8WV48 AL163973.2-201ENST00000548096 288 ntTSL 3 BASIC4.2□□□□□ -1.74
CCDC107Q8WV48 LINC02394-201ENST00000549140 543 ntTSL 4 BASIC4.2□□□□□ -1.74
CCDC107Q8WV48 GPATCH2L-203ENST00000553588 776 ntTSL 2 BASIC4.2□□□□□ -1.74
CCDC107Q8WV48 AL442163.2-201ENST00000553912 710 ntBASIC4.2□□□□□ -1.74
CCDC107Q8WV48 AC079075.2-201ENST00000557964 449 ntTSL 4 BASIC4.2□□□□□ -1.74
CCDC107Q8WV48 AC007599.2-201ENST00000573040 493 ntTSL 5 BASIC4.2□□□□□ -1.74
CCDC107Q8WV48 MIR7515HG-254ENST00000593269 943 ntTSL 5 BASIC4.2□□□□□ -1.74
CCDC107Q8WV48 AC069304.3-201ENST00000603938 1084 ntBASIC4.2□□□□□ -1.74
CCDC107Q8WV48 AC002487.1-201ENST00000604565 994 ntBASIC4.2□□□□□ -1.74
CCDC107Q8WV48 AC087783.2-201ENST00000605070 562 ntBASIC4.2□□□□□ -1.74
CCDC107Q8WV48 AP000238.1-201ENST00000608759 426 ntBASIC4.2□□□□□ -1.74
CCDC107Q8WV48 IL21-202ENST00000611104 707 ntAPPRIS ALT2 TSL 1 (best) BASIC4.2□□□□□ -1.74
CCDC107Q8WV48 AC090527.3-201ENST00000619041 548 ntBASIC4.2□□□□□ -1.74
CCDC107Q8WV48 AC015908.5-201ENST00000623289 343 ntBASIC4.2□□□□□ -1.74
CCDC107Q8WV48 AP003072.4-201ENST00000624580 310 ntBASIC4.2□□□□□ -1.74
CCDC107Q8WV48 VIPR1-AS1-223ENST00000627073 451 ntTSL 5 BASIC4.2□□□□□ -1.74
CCDC107Q8WV48 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
CCDC107Q8WV48 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC4.2□□□□□ -1.74
CCDC107Q8WV48 AC004803.1-201ENST00000503602 3207 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
CCDC107Q8WV48 CDC42SE2-201ENST00000360515 3591 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
CCDC107Q8WV48 AC092162.3-201ENST00000624511 1624 ntBASIC4.2□□□□□ -1.74
CCDC107Q8WV48 SCN1A-210ENST00000635776 10107 ntTSL 5 BASIC4.2□□□□□ -1.74
CCDC107Q8WV48 ZNF645-201ENST00000323684 1519 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
CCDC107Q8WV48 RNF133-201ENST00000340112 1445 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
CCDC107Q8WV48 HGF-202ENST00000354224 1425 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
CCDC107Q8WV48 KLRC1-202ENST00000359151 1407 ntAPPRIS P4 TSL 1 (best) BASIC4.2□□□□□ -1.74
CCDC107Q8WV48 ALB-219ENST00000621085 1418 ntTSL 5 BASIC4.2□□□□□ -1.74
CCDC107Q8WV48 RIMS2-201ENST00000262231 3854 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
CCDC107Q8WV48 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
CCDC107Q8WV48 CLSPN-206ENST00000520551 4010 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
CCDC107Q8WV48 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
CCDC107Q8WV48 SPAG5-AS1-202ENST00000424210 1551 ntTSL 2 BASIC4.19□□□□□ -1.74
CCDC107Q8WV48 AC091046.3-201ENST00000631455 1574 ntBASIC4.19□□□□□ -1.74
CCDC107Q8WV48 AC104793.1-201ENST00000508189 2840 ntTSL 2 BASIC4.19□□□□□ -1.74
CCDC107Q8WV48 ADGRL3-216ENST00000514157 4789 ntTSL 5 BASIC4.19□□□□□ -1.74
CCDC107Q8WV48 UGT2A3-201ENST00000251566 2965 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
CCDC107Q8WV48 ZEB1-202ENST00000361642 5990 ntAPPRIS ALT2 TSL 1 (best) BASIC4.19□□□□□ -1.74
CCDC107Q8WV48 USP9YP4-201ENST00000424401 1745 ntBASIC4.19□□□□□ -1.74
CCDC107Q8WV48 CENPE-202ENST00000380026 8241 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
CCDC107Q8WV48 CLEC7A-202ENST00000304084 1130 ntAPPRIS ALT1 TSL 1 (best) BASIC4.19□□□□□ -1.74
CCDC107Q8WV48 OR4N5-201ENST00000333629 927 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
CCDC107Q8WV48 U3.2-201ENST00000362981 210 ntBASIC4.19□□□□□ -1.74
CCDC107Q8WV48 RN7SKP162-201ENST00000363605 345 ntBASIC4.19□□□□□ -1.74
CCDC107Q8WV48 RNA5SP28-201ENST00000363841 119 ntBASIC4.19□□□□□ -1.74
CCDC107Q8WV48 FABP7-202ENST00000368444 1026 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
CCDC107Q8WV48 CARD16-201ENST00000375704 613 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
CCDC107Q8WV48 Y_RNA.472-201ENST00000384322 102 ntBASIC4.19□□□□□ -1.74
CCDC107Q8WV48 U3.25-201ENST00000391209 220 ntBASIC4.19□□□□□ -1.74
CCDC107Q8WV48 U3.35-201ENST00000408405 208 ntBASIC4.19□□□□□ -1.74
CCDC107Q8WV48 RNU6-575P-201ENST00000411326 105 ntBASIC4.19□□□□□ -1.74
CCDC107Q8WV48 IFNAR2-206ENST00000413881 710 ntTSL 5 BASIC4.19□□□□□ -1.74
CCDC107Q8WV48 AC073136.2-201ENST00000417282 849 ntBASIC4.19□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 124.5 ms