Protein–RNA interactions for Protein: Q8NET4

RTL9, Retrotransposon Gag-like protein 9, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL9Q8NET4 RPL23AP89-201ENST00000439324 255 ntBASIC5.03□□□□□ -1.6
RTL9Q8NET4 RPS11P1-201ENST00000451072 473 ntBASIC5.03□□□□□ -1.6
RTL9Q8NET4 AC026726.1-201ENST00000512859 601 ntBASIC5.03□□□□□ -1.6
RTL9Q8NET4 RNU7-143P-201ENST00000516781 65 ntBASIC5.03□□□□□ -1.6
RTL9Q8NET4 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC5.03□□□□□ -1.6
RTL9Q8NET4 AL592436.1-201ENST00000605135 558 ntBASIC5.03□□□□□ -1.6
RTL9Q8NET4 AL354798.1-201ENST00000622505 329 ntBASIC5.03□□□□□ -1.6
RTL9Q8NET4 AC239809.3-202ENST00000628902 686 ntTSL 5 BASIC5.03□□□□□ -1.6
RTL9Q8NET4 AC007389.5-201ENST00000629214 744 ntTSL 5 BASIC5.03□□□□□ -1.6
RTL9Q8NET4 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC5.03□□□□□ -1.6
RTL9Q8NET4 LINC02458-201ENST00000500381 2941 ntTSL 2 BASIC5.02□□□□□ -1.61
RTL9Q8NET4 PRLR-217ENST00000618457 11688 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
RTL9Q8NET4 ZPLD1-202ENST00000466937 1531 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
RTL9Q8NET4 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
RTL9Q8NET4 SAMSN1-201ENST00000285670 2185 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
RTL9Q8NET4 AC083843.3-201ENST00000623679 2186 ntBASIC5.02□□□□□ -1.61
RTL9Q8NET4 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC5.02□□□□□ -1.61
RTL9Q8NET4 GPBP1-205ENST00000511209 2243 ntAPPRIS ALT2 TSL 2 BASIC5.02□□□□□ -1.61
RTL9Q8NET4 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC5.02□□□□□ -1.61
RTL9Q8NET4 ZFAND6-223ENST00000616533 1653 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
RTL9Q8NET4 FOXP2-226ENST00000635638 2598 ntAPPRIS ALT1 TSL 5 BASIC5.02□□□□□ -1.61
RTL9Q8NET4 AC006042.3-201ENST00000454684 1469 ntBASIC5.02□□□□□ -1.61
RTL9Q8NET4 ING3-205ENST00000445699 1723 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
RTL9Q8NET4 RNU1-15P-201ENST00000353977 144 ntBASIC5.02□□□□□ -1.61
RTL9Q8NET4 HMGB3P19-201ENST00000403971 560 ntBASIC5.02□□□□□ -1.61
RTL9Q8NET4 VN1R8P-201ENST00000407739 893 ntBASIC5.02□□□□□ -1.61
RTL9Q8NET4 RPS23P10-201ENST00000416185 486 ntBASIC5.02□□□□□ -1.61
RTL9Q8NET4 CLEC4E-202ENST00000446457 701 ntTSL 3 BASIC5.02□□□□□ -1.61
RTL9Q8NET4 AC018731.1-201ENST00000447078 576 ntTSL 4 BASIC5.02□□□□□ -1.61
RTL9Q8NET4 AL157400.3-201ENST00000449882 1298 ntTSL 5 BASIC5.02□□□□□ -1.61
RTL9Q8NET4 AL591623.2-201ENST00000449978 222 ntBASIC5.02□□□□□ -1.61
RTL9Q8NET4 PRSS3P4-201ENST00000453323 162 ntBASIC5.02□□□□□ -1.61
RTL9Q8NET4 AP001267.3-202ENST00000525992 448 ntTSL 3 BASIC5.02□□□□□ -1.61
RTL9Q8NET4 AC091516.1-201ENST00000549191 703 ntBASIC5.02□□□□□ -1.61
RTL9Q8NET4 RN7SL339P-201ENST00000580597 296 ntBASIC5.02□□□□□ -1.61
RTL9Q8NET4 KMT2E-216ENST00000622386 1588 ntTSL 5 BASIC5.01□□□□□ -1.61
RTL9Q8NET4 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
RTL9Q8NET4 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
RTL9Q8NET4 C12orf45-204ENST00000552951 23529 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
RTL9Q8NET4 SLC10A2-201ENST00000245312 3779 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
RTL9Q8NET4 CNTN5-207ENST00000527185 4303 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
RTL9Q8NET4 AC024940.1-203ENST00000398963 4423 ntAPPRIS ALT2 TSL 5 BASIC5.01□□□□□ -1.61
RTL9Q8NET4 UBA6-AS1-203ENST00000500538 3352 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
RTL9Q8NET4 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
RTL9Q8NET4 BMS1P3-201ENST00000372011 932 ntBASIC5.01□□□□□ -1.61
RTL9Q8NET4 MIR200C-201ENST00000384980 68 ntBASIC5.01□□□□□ -1.61
RTL9Q8NET4 CYP1B1-AS1-202ENST00000427168 484 ntTSL 4 BASIC5.01□□□□□ -1.61
RTL9Q8NET4 AC068196.1-201ENST00000456895 833 ntTSL 3 BASIC5.01□□□□□ -1.61
RTL9Q8NET4 RNU6-352P-201ENST00000516908 107 ntBASIC5.01□□□□□ -1.61
RTL9Q8NET4 AC013549.2-201ENST00000526953 489 ntTSL 3 BASIC5.01□□□□□ -1.61
RTL9Q8NET4 AC010601.1-202ENST00000567304 547 ntTSL 4 BASIC5.01□□□□□ -1.61
RTL9Q8NET4 MIR3944-201ENST00000581277 108 ntBASIC5.01□□□□□ -1.61
RTL9Q8NET4 AL161756.2-201ENST00000604597 246 ntBASIC5.01□□□□□ -1.61
RTL9Q8NET4 SNORA51-201ENST00000606420 132 ntBASIC5.01□□□□□ -1.61
RTL9Q8NET4 SMCR2_2.1-201ENST00000619783 161 ntBASIC5.01□□□□□ -1.61
RTL9Q8NET4 AL356121.2-201ENST00000624715 780 ntBASIC5.01□□□□□ -1.61
RTL9Q8NET4 FAM26D-205ENST00000628083 1117 ntTSL 2 BASIC5.01□□□□□ -1.61
RTL9Q8NET4 TTC39DP-201ENST00000416781 1688 ntBASIC5□□□□□ -1.61
RTL9Q8NET4 SLC44A5-202ENST00000370859 3896 ntAPPRIS ALT2 TSL 2 BASIC5□□□□□ -1.61
RTL9Q8NET4 OTOGL-202ENST00000458043 8083 ntAPPRIS P5 TSL 5 BASIC5□□□□□ -1.61
RTL9Q8NET4 HCFC2P1-201ENST00000392864 1592 ntBASIC5□□□□□ -1.61
RTL9Q8NET4 AL353608.1-201ENST00000419576 416 ntTSL 5 BASIC5□□□□□ -1.61
RTL9Q8NET4 LINC00415-201ENST00000439079 435 ntTSL 3 BASIC5□□□□□ -1.61
RTL9Q8NET4 PTMAP3-201ENST00000447474 330 ntBASIC5□□□□□ -1.61
RTL9Q8NET4 AC092691.2-201ENST00000461787 803 ntBASIC5□□□□□ -1.61
RTL9Q8NET4 RPS27L-205ENST00000462430 681 ntTSL 2 BASIC5□□□□□ -1.61
RTL9Q8NET4 ACTR3P3-201ENST00000480448 893 ntBASIC5□□□□□ -1.61
RTL9Q8NET4 AC009446.1-202ENST00000521131 473 ntTSL 3 BASIC5□□□□□ -1.61
RTL9Q8NET4 AC023442.3-203ENST00000530946 533 ntTSL 4 BASIC5□□□□□ -1.61
RTL9Q8NET4 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC5□□□□□ -1.61
RTL9Q8NET4 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC5□□□□□ -1.61
RTL9Q8NET4 EIF4A2P1-201ENST00000587313 1063 ntBASIC5□□□□□ -1.61
RTL9Q8NET4 AC012468.1-201ENST00000604888 430 ntBASIC5□□□□□ -1.61
RTL9Q8NET4 SATB1-AS1-263ENST00000630022 622 ntTSL 5 BASIC5□□□□□ -1.61
RTL9Q8NET4 DARS-AS1-230ENST00000631306 530 ntTSL 5 BASIC5□□□□□ -1.61
RTL9Q8NET4 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
RTL9Q8NET4 RXFP1-204ENST00000423548 3930 ntTSL 2 BASIC5□□□□□ -1.61
RTL9Q8NET4 OFD1P5Y-201ENST00000447585 2590 ntBASIC5□□□□□ -1.61
RTL9Q8NET4 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
RTL9Q8NET4 MTHFD2L-201ENST00000325278 2300 ntAPPRIS ALT2 TSL 5 BASIC4.99□□□□□ -1.61
RTL9Q8NET4 TCN1-201ENST00000257264 1582 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
RTL9Q8NET4 KATNAL1-201ENST00000380615 7551 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
RTL9Q8NET4 CNTN5-212ENST00000619298 5734 ntTSL 5 BASIC4.99□□□□□ -1.61
RTL9Q8NET4 STON1-GTF2A1L-203ENST00000402114 3790 ntTSL 2 BASIC4.99□□□□□ -1.61
RTL9Q8NET4 RNA5SP119-201ENST00000362715 117 ntBASIC4.99□□□□□ -1.61
RTL9Q8NET4 REV3L-IT1-201ENST00000411895 382 ntTSL 5 BASIC4.99□□□□□ -1.61
RTL9Q8NET4 LINC00161-201ENST00000412526 870 ntTSL 2 BASIC4.99□□□□□ -1.61
RTL9Q8NET4 AL357507.1-201ENST00000435946 669 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
RTL9Q8NET4 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC4.99□□□□□ -1.61
RTL9Q8NET4 AC022336.1-201ENST00000475510 337 ntBASIC4.99□□□□□ -1.61
RTL9Q8NET4 AC113346.1-201ENST00000510150 287 ntTSL 3 BASIC4.99□□□□□ -1.61
RTL9Q8NET4 NDUFA5P2-201ENST00000519723 344 ntBASIC4.99□□□□□ -1.61
RTL9Q8NET4 AC109635.6-201ENST00000525487 1113 ntBASIC4.99□□□□□ -1.61
RTL9Q8NET4 SNHG14-221ENST00000554726 1116 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
RTL9Q8NET4 AL359232.1-201ENST00000556361 442 ntTSL 3 BASIC4.99□□□□□ -1.61
RTL9Q8NET4 Z95327.2-201ENST00000414579 1873 ntBASIC4.99□□□□□ -1.61
RTL9Q8NET4 UGP2-203ENST00000445915 1955 ntTSL 2 BASIC4.99□□□□□ -1.61
RTL9Q8NET4 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC4.98□□□□□ -1.61
RTL9Q8NET4 EPHA3-202ENST00000452448 2546 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
RTL9Q8NET4 KYNU-201ENST00000264170 15316 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 86.7 ms