Protein–RNA interactions for Protein: Q8N3C7

CLIP4, CAP-Gly domain-containing linker protein 4, humanhuman

Predictions only

Length 705 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4Q8N3C7 AC092685.1-201ENST00000447960 1243 ntBASIC4.56□□□□□ -1.68
CLIP4Q8N3C7 ART2BP-201ENST00000453501 499 ntBASIC4.56□□□□□ -1.68
CLIP4Q8N3C7 AC010890.1-201ENST00000454699 469 ntTSL 4 BASIC4.56□□□□□ -1.68
CLIP4Q8N3C7 OR2AF1P-201ENST00000454899 889 ntBASIC4.56□□□□□ -1.68
CLIP4Q8N3C7 ATG12P2-201ENST00000456830 416 ntBASIC4.56□□□□□ -1.68
CLIP4Q8N3C7 LINC00709-201ENST00000458168 494 ntTSL 2 BASIC4.56□□□□□ -1.68
CLIP4Q8N3C7 B4GALT4-AS1-201ENST00000470790 544 ntTSL 5 BASIC4.56□□□□□ -1.68
CLIP4Q8N3C7 RN7SL222P-201ENST00000476452 299 ntBASIC4.56□□□□□ -1.68
CLIP4Q8N3C7 AC079910.1-201ENST00000477099 749 ntTSL 3 BASIC4.56□□□□□ -1.68
CLIP4Q8N3C7 BX284632.1-201ENST00000478218 541 ntBASIC4.56□□□□□ -1.68
CLIP4Q8N3C7 AC108748.1-201ENST00000487772 515 ntTSL 3 BASIC4.56□□□□□ -1.68
CLIP4Q8N3C7 LINC00971-203ENST00000491849 452 ntTSL 3 BASIC4.56□□□□□ -1.68
CLIP4Q8N3C7 RN7SL244P-201ENST00000493405 297 ntBASIC4.56□□□□□ -1.68
CLIP4Q8N3C7 EEF1A1P25-201ENST00000495704 1267 ntBASIC4.56□□□□□ -1.68
CLIP4Q8N3C7 HOMER1-204ENST00000508576 815 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
CLIP4Q8N3C7 AC119751.1-201ENST00000513357 765 ntBASIC4.56□□□□□ -1.68
CLIP4Q8N3C7 RNA5SP43-201ENST00000516559 110 ntBASIC4.56□□□□□ -1.68
CLIP4Q8N3C7 RN7SKP260-201ENST00000516907 149 ntBASIC4.56□□□□□ -1.68
CLIP4Q8N3C7 IGHVII-44-2-201ENST00000517728 250 ntBASIC4.56□□□□□ -1.68
CLIP4Q8N3C7 MTCO1P47-201ENST00000523889 1271 ntBASIC4.56□□□□□ -1.68
CLIP4Q8N3C7 EIF4A2P5-201ENST00000529914 499 ntBASIC4.56□□□□□ -1.68
CLIP4Q8N3C7 DEFB130C-202ENST00000530001 230 ntBASIC4.56□□□□□ -1.68
CLIP4Q8N3C7 AP003557.1-201ENST00000531715 585 ntTSL 3 BASIC4.56□□□□□ -1.68
CLIP4Q8N3C7 AC022511.1-201ENST00000544089 476 ntTSL 2 BASIC4.56□□□□□ -1.68
CLIP4Q8N3C7 G2E3-AS1-201ENST00000548631 579 ntTSL 3 BASIC4.56□□□□□ -1.68
CLIP4Q8N3C7 AL133372.3-201ENST00000553082 821 ntTSL 3 BASIC4.56□□□□□ -1.68
CLIP4Q8N3C7 NMNAT1P1-201ENST00000554095 876 ntBASIC4.56□□□□□ -1.68
CLIP4Q8N3C7 AC004825.1-201ENST00000555068 586 ntBASIC4.56□□□□□ -1.68
CLIP4Q8N3C7 PSMA4-206ENST00000558341 719 ntTSL 5 BASIC4.56□□□□□ -1.68
CLIP4Q8N3C7 AC015660.2-201ENST00000561362 323 ntTSL 3 BASIC4.56□□□□□ -1.68
CLIP4Q8N3C7 AL109741.3-201ENST00000561748 592 ntBASIC4.56□□□□□ -1.68
CLIP4Q8N3C7 AC092140.1-201ENST00000563090 549 ntTSL 3 BASIC4.56□□□□□ -1.68
CLIP4Q8N3C7 CYCSP40-201ENST00000575927 294 ntBASIC4.56□□□□□ -1.68
CLIP4Q8N3C7 MIR4489-201ENST00000578869 62 ntBASIC4.56□□□□□ -1.68
CLIP4Q8N3C7 MIR1269B-201ENST00000580405 75 ntBASIC4.56□□□□□ -1.68
CLIP4Q8N3C7 AC015688.2-201ENST00000584523 262 ntBASIC4.56□□□□□ -1.68
CLIP4Q8N3C7 AC022916.4-201ENST00000585646 475 ntTSL 3 BASIC4.56□□□□□ -1.68
CLIP4Q8N3C7 SLC14A2-AS1-201ENST00000585759 494 ntTSL 3 BASIC4.56□□□□□ -1.68
CLIP4Q8N3C7 ZNF682-204ENST00000593468 581 ntTSL 4 BASIC4.56□□□□□ -1.68
CLIP4Q8N3C7 AC100781.1-203ENST00000598549 399 ntTSL 5 BASIC4.56□□□□□ -1.68
CLIP4Q8N3C7 AC124856.1-201ENST00000600819 896 ntBASIC4.56□□□□□ -1.68
CLIP4Q8N3C7 AL020997.3-201ENST00000602843 359 ntBASIC4.56□□□□□ -1.68
CLIP4Q8N3C7 AC011374.2-201ENST00000607135 526 ntBASIC4.56□□□□□ -1.68
CLIP4Q8N3C7 AC245008.1-201ENST00000608123 476 ntBASIC4.56□□□□□ -1.68
CLIP4Q8N3C7 AC024257.5-201ENST00000612739 531 ntBASIC4.56□□□□□ -1.68
CLIP4Q8N3C7 AL627230.1-201ENST00000613077 211 ntBASIC4.56□□□□□ -1.68
CLIP4Q8N3C7 AL049794.2-201ENST00000616301 365 ntBASIC4.56□□□□□ -1.68
CLIP4Q8N3C7 AC009090.3-201ENST00000616553 565 ntBASIC4.56□□□□□ -1.68
CLIP4Q8N3C7 AL591926.8-201ENST00000616876 211 ntBASIC4.56□□□□□ -1.68
CLIP4Q8N3C7 TADA2A-212ENST00000620367 1043 ntTSL 5 BASIC4.56□□□□□ -1.68
CLIP4Q8N3C7 LINC00284-211ENST00000620454 534 ntTSL 4 BASIC4.56□□□□□ -1.68
CLIP4Q8N3C7 ST6GALNAC3-203ENST00000621530 617 ntTSL 5 BASIC4.56□□□□□ -1.68
CLIP4Q8N3C7 AC079298.3-203ENST00000623269 555 ntTSL 3 BASIC4.56□□□□□ -1.68
CLIP4Q8N3C7 CU634019.2-201ENST00000625184 593 ntTSL 3 BASIC4.56□□□□□ -1.68
CLIP4Q8N3C7 AL355480.1-201ENST00000629041 99 ntBASIC4.56□□□□□ -1.68
CLIP4Q8N3C7 AL355306.2-208ENST00000634868 1251 ntTSL 5 BASIC4.56□□□□□ -1.68
CLIP4Q8N3C7 AC068620.4-201ENST00000636730 1182 ntBASIC4.56□□□□□ -1.68
CLIP4Q8N3C7 MIR4302-201ENST00000638058 60 ntBASIC4.56□□□□□ -1.68
CLIP4Q8N3C7 STON1-GTF2A1L-203ENST00000402114 3790 ntTSL 2 BASIC4.56□□□□□ -1.68
CLIP4Q8N3C7 FOXP2-220ENST00000634411 4065 ntTSL 5 BASIC4.56□□□□□ -1.68
CLIP4Q8N3C7 AC097461.1-201ENST00000568928 2821 ntBASIC4.56□□□□□ -1.68
CLIP4Q8N3C7 PREPL-205ENST00000409411 4725 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
CLIP4Q8N3C7 TM4SF1-202ENST00000472441 3115 ntTSL 2 BASIC4.56□□□□□ -1.68
CLIP4Q8N3C7 OMG-201ENST00000247271 1947 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
CLIP4Q8N3C7 LINC01192-202ENST00000470546 1519 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
CLIP4Q8N3C7 IQGAP2-203ENST00000396234 3376 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
CLIP4Q8N3C7 PUS7L-203ENST00000431332 1873 ntTSL 2 BASIC4.56□□□□□ -1.68
CLIP4Q8N3C7 STAMBPL1-202ENST00000371924 2208 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
CLIP4Q8N3C7 CNTRL-205ENST00000373850 5824 ntTSL 2 BASIC4.55□□□□□ -1.68
CLIP4Q8N3C7 AC068254.2-201ENST00000623938 3577 ntBASIC4.55□□□□□ -1.68
CLIP4Q8N3C7 AC009643.2-201ENST00000603543 1448 ntBASIC4.55□□□□□ -1.68
CLIP4Q8N3C7 PLCE1-202ENST00000371380 12024 ntAPPRIS P3 TSL 1 (best) BASIC4.55□□□□□ -1.68
CLIP4Q8N3C7 RNMT-209ENST00000592764 4108 ntTSL 2 BASIC4.55□□□□□ -1.68
CLIP4Q8N3C7 PDE10A-201ENST00000366882 8233 ntAPPRIS P3 TSL 5 BASIC4.55□□□□□ -1.68
CLIP4Q8N3C7 AL133243.3-201ENST00000617415 3004 ntBASIC4.55□□□□□ -1.68
CLIP4Q8N3C7 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
CLIP4Q8N3C7 CASP10-204ENST00000346817 3926 ntAPPRIS ALT2 TSL 5 BASIC4.55□□□□□ -1.68
CLIP4Q8N3C7 CNTRL-201ENST00000238341 7431 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
CLIP4Q8N3C7 TAS2R8-201ENST00000240615 1243 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
CLIP4Q8N3C7 PIH1D2-201ENST00000280350 1241 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
CLIP4Q8N3C7 RNA5SP435-201ENST00000364044 108 ntBASIC4.55□□□□□ -1.68
CLIP4Q8N3C7 RNA5SP455-201ENST00000365190 119 ntBASIC4.55□□□□□ -1.68
CLIP4Q8N3C7 OR14A2-201ENST00000366485 945 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
CLIP4Q8N3C7 RNU6-532P-201ENST00000384318 107 ntBASIC4.55□□□□□ -1.68
CLIP4Q8N3C7 MIR223-201ENST00000385204 110 ntBASIC4.55□□□□□ -1.68
CLIP4Q8N3C7 KRTAP3-2-201ENST00000391587 702 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
CLIP4Q8N3C7 HMGB3P7-201ENST00000400214 611 ntBASIC4.55□□□□□ -1.68
CLIP4Q8N3C7 TMBIM7P-201ENST00000418074 855 ntBASIC4.55□□□□□ -1.68
CLIP4Q8N3C7 AC090960.1-201ENST00000421072 306 ntBASIC4.55□□□□□ -1.68
CLIP4Q8N3C7 DDX39BP1-205ENST00000422507 192 ntBASIC4.55□□□□□ -1.68
CLIP4Q8N3C7 LINC02238-201ENST00000424953 557 ntTSL 5 BASIC4.55□□□□□ -1.68
CLIP4Q8N3C7 C1DP1-201ENST00000426049 402 ntBASIC4.55□□□□□ -1.68
CLIP4Q8N3C7 AL122010.1-201ENST00000429293 720 ntTSL 2 BASIC4.55□□□□□ -1.68
CLIP4Q8N3C7 AC009478.1-201ENST00000429816 562 ntTSL 3 BASIC4.55□□□□□ -1.68
CLIP4Q8N3C7 BACH1-IT3-201ENST00000429843 406 ntTSL 2 BASIC4.55□□□□□ -1.68
CLIP4Q8N3C7 PIH1D2-202ENST00000431456 1245 ntTSL 5 BASIC4.55□□□□□ -1.68
CLIP4Q8N3C7 AC009299.3-203ENST00000435692 1096 ntTSL 5 BASIC4.55□□□□□ -1.68
CLIP4Q8N3C7 OR5H14-201ENST00000437310 1080 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
CLIP4Q8N3C7 CLEC5A-202ENST00000438351 743 ntTSL 3 BASIC4.55□□□□□ -1.68
CLIP4Q8N3C7 CACYBPP1-201ENST00000438592 684 ntBASIC4.55□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 93.7 ms