Protein–RNA interactions for Protein: P60608

ERVFC1-1, Endogenous retrovirus group FC1 member 1 Env polyprotein, humanhuman

Predictions only

Length 527 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERVFC1-1P60608 LIMA1-214ENST00000552783 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC4.13□□□□□ -1.75
ERVFC1-1P60608 THAP6-202ENST00000380837 3423 ntAPPRIS ALT2 TSL 1 (best) BASIC4.13□□□□□ -1.75
ERVFC1-1P60608 SLC9C1-201ENST00000305815 4172 ntAPPRIS P3 TSL 2 BASIC4.13□□□□□ -1.75
ERVFC1-1P60608 CLSPN-203ENST00000373220 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC4.13□□□□□ -1.75
ERVFC1-1P60608 ORC4-216ENST00000540442 6472 ntTSL 2 BASIC4.13□□□□□ -1.75
ERVFC1-1P60608 PHTF2-208ENST00000450574 2516 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
ERVFC1-1P60608 UGT2A2-201ENST00000604021 1544 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
ERVFC1-1P60608 TAS2R9-201ENST00000240691 1075 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
ERVFC1-1P60608 METTL21EP-201ENST00000298105 713 ntBASIC4.13□□□□□ -1.75
ERVFC1-1P60608 MAX-203ENST00000341653 330 ntTSL 2 BASIC4.13□□□□□ -1.75
ERVFC1-1P60608 RNU6-560P-201ENST00000364007 108 ntBASIC4.13□□□□□ -1.75
ERVFC1-1P60608 RN7SKP224-201ENST00000364140 325 ntBASIC4.13□□□□□ -1.75
ERVFC1-1P60608 SUGT1P2-201ENST00000379452 992 ntBASIC4.13□□□□□ -1.75
ERVFC1-1P60608 AC093719.1-202ENST00000392735 373 ntBASIC4.13□□□□□ -1.75
ERVFC1-1P60608 PTPN20-208ENST00000395727 790 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
ERVFC1-1P60608 LAP3P1-201ENST00000403648 294 ntBASIC4.13□□□□□ -1.75
ERVFC1-1P60608 HIST1H3PS1-201ENST00000404612 417 ntBASIC4.13□□□□□ -1.75
ERVFC1-1P60608 RN7SKP29-201ENST00000410957 272 ntBASIC4.13□□□□□ -1.75
ERVFC1-1P60608 LYST-AS1-201ENST00000412098 521 ntTSL 3 BASIC4.13□□□□□ -1.75
ERVFC1-1P60608 AC013404.1-201ENST00000413068 249 ntBASIC4.13□□□□□ -1.75
ERVFC1-1P60608 OFD1P11Y-201ENST00000418213 1177 ntBASIC4.13□□□□□ -1.75
ERVFC1-1P60608 DCN-203ENST00000420120 753 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
ERVFC1-1P60608 E2F6P2-201ENST00000420708 748 ntBASIC4.13□□□□□ -1.75
ERVFC1-1P60608 ODF2-AS1-201ENST00000420801 407 ntTSL 3 BASIC4.13□□□□□ -1.75
ERVFC1-1P60608 IPPKP1-201ENST00000422501 768 ntBASIC4.13□□□□□ -1.75
ERVFC1-1P60608 RPS29P14-201ENST00000431518 171 ntBASIC4.13□□□□□ -1.75
ERVFC1-1P60608 AL358972.1-201ENST00000434356 466 ntTSL 2 BASIC4.13□□□□□ -1.75
ERVFC1-1P60608 AC023481.1-201ENST00000435368 938 ntTSL 3 BASIC4.13□□□□□ -1.75
ERVFC1-1P60608 MTCYBP34-201ENST00000439552 670 ntBASIC4.13□□□□□ -1.75
ERVFC1-1P60608 AL365258.1-201ENST00000440885 247 ntTSL 3 BASIC4.13□□□□□ -1.75
ERVFC1-1P60608 MTND3P1-201ENST00000441336 220 ntBASIC4.13□□□□□ -1.75
ERVFC1-1P60608 RPL23AP76-201ENST00000441860 458 ntBASIC4.13□□□□□ -1.75
ERVFC1-1P60608 AP000146.1-203ENST00000444178 309 ntTSL 3 BASIC4.13□□□□□ -1.75
ERVFC1-1P60608 AC034228.3-201ENST00000446275 562 ntTSL 3 BASIC4.13□□□□□ -1.75
ERVFC1-1P60608 AC005002.1-201ENST00000447458 540 ntBASIC4.13□□□□□ -1.75
ERVFC1-1P60608 AC099566.1-212ENST00000451675 799 ntTSL 3 BASIC4.13□□□□□ -1.75
ERVFC1-1P60608 AL355613.1-201ENST00000451856 480 ntTSL 2 BASIC4.13□□□□□ -1.75
ERVFC1-1P60608 MRPL42P4-201ENST00000453267 443 ntBASIC4.13□□□□□ -1.75
ERVFC1-1P60608 AL391704.1-202ENST00000453889 874 ntTSL 3 BASIC4.13□□□□□ -1.75
ERVFC1-1P60608 NDUFA12P1-201ENST00000455914 406 ntBASIC4.13□□□□□ -1.75
ERVFC1-1P60608 DCN-206ENST00000456569 228 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
ERVFC1-1P60608 AC011287.2-201ENST00000456809 842 ntTSL 5 BASIC4.13□□□□□ -1.75
ERVFC1-1P60608 RPS27AP2-201ENST00000457576 465 ntBASIC4.13□□□□□ -1.75
ERVFC1-1P60608 AC117386.1-201ENST00000474444 606 ntTSL 4 BASIC4.13□□□□□ -1.75
ERVFC1-1P60608 AC091959.2-201ENST00000477363 321 ntBASIC4.13□□□□□ -1.75
ERVFC1-1P60608 EGFLAM-AS3-201ENST00000505267 549 ntTSL 5 BASIC4.13□□□□□ -1.75
ERVFC1-1P60608 AC112198.1-201ENST00000505369 1220 ntBASIC4.13□□□□□ -1.75
ERVFC1-1P60608 AC025458.1-201ENST00000506046 166 ntBASIC4.13□□□□□ -1.75
ERVFC1-1P60608 AC010424.1-201ENST00000506336 297 ntBASIC4.13□□□□□ -1.75
ERVFC1-1P60608 DUTP7-201ENST00000507982 486 ntBASIC4.13□□□□□ -1.75
ERVFC1-1P60608 AC122710.1-201ENST00000510622 553 ntTSL 5 BASIC4.13□□□□□ -1.75
ERVFC1-1P60608 OR5H7P-201ENST00000514084 930 ntBASIC4.13□□□□□ -1.75
ERVFC1-1P60608 AC092436.2-201ENST00000515188 411 ntTSL 2 BASIC4.13□□□□□ -1.75
ERVFC1-1P60608 HAND2-AS1-233ENST00000515345 797 ntTSL 3 BASIC4.13□□□□□ -1.75
ERVFC1-1P60608 RN7SKP238-201ENST00000516483 249 ntBASIC4.13□□□□□ -1.75
ERVFC1-1P60608 RN7SKP35-201ENST00000517210 151 ntBASIC4.13□□□□□ -1.75
ERVFC1-1P60608 AC060775.1-201ENST00000518241 520 ntBASIC4.13□□□□□ -1.75
ERVFC1-1P60608 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC4.13□□□□□ -1.75
ERVFC1-1P60608 MAL2-207ENST00000522828 603 ntTSL 3 BASIC4.13□□□□□ -1.75
ERVFC1-1P60608 TAS2R46-201ENST00000533467 930 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
ERVFC1-1P60608 AP000619.3-201ENST00000535634 1127 ntBASIC4.13□□□□□ -1.75
ERVFC1-1P60608 AKIRIN1P1-201ENST00000547384 544 ntBASIC4.13□□□□□ -1.75
ERVFC1-1P60608 AC144548.2-201ENST00000550231 946 ntTSL 3 BASIC4.13□□□□□ -1.75
ERVFC1-1P60608 AC027104.1-201ENST00000563702 681 ntBASIC4.13□□□□□ -1.75
ERVFC1-1P60608 AC116553.2-201ENST00000564203 463 ntBASIC4.13□□□□□ -1.75
ERVFC1-1P60608 AC010546.1-201ENST00000569391 485 ntBASIC4.13□□□□□ -1.75
ERVFC1-1P60608 MIR3912-201ENST00000577566 105 ntBASIC4.13□□□□□ -1.75
ERVFC1-1P60608 AC100863.1-201ENST00000584843 560 ntTSL 4 BASIC4.13□□□□□ -1.75
ERVFC1-1P60608 LAMTOR5-AS1-203ENST00000585330 463 ntTSL 2 BASIC4.13□□□□□ -1.75
ERVFC1-1P60608 TTN-AS1-217ENST00000585625 945 ntTSL 5 BASIC4.13□□□□□ -1.75
ERVFC1-1P60608 AC008521.2-201ENST00000591021 259 ntBASIC4.13□□□□□ -1.75
ERVFC1-1P60608 GMFG-202ENST00000594700 397 ntTSL 2 BASIC4.13□□□□□ -1.75
ERVFC1-1P60608 AC097467.3-209ENST00000595760 615 ntTSL 5 BASIC4.13□□□□□ -1.75
ERVFC1-1P60608 AC012313.4-201ENST00000596296 495 ntTSL 3 BASIC4.13□□□□□ -1.75
ERVFC1-1P60608 VN1R82P-201ENST00000601481 356 ntBASIC4.13□□□□□ -1.75
ERVFC1-1P60608 AC078795.2-201ENST00000602835 1252 ntBASIC4.13□□□□□ -1.75
ERVFC1-1P60608 RNF138P2-201ENST00000603490 592 ntBASIC4.13□□□□□ -1.75
ERVFC1-1P60608 AL008729.1-201ENST00000606627 553 ntTSL 4 BASIC4.13□□□□□ -1.75
ERVFC1-1P60608 HNF1A-AS1-205ENST00000619441 343 ntTSL 3 BASIC4.13□□□□□ -1.75
ERVFC1-1P60608 AC092656.1-203ENST00000624134 423 ntBASIC4.13□□□□□ -1.75
ERVFC1-1P60608 MIR4278-201ENST00000636094 69 ntBASIC4.13□□□□□ -1.75
ERVFC1-1P60608 WISP3-211ENST00000639360 1026 ntTSL 5 BASIC4.13□□□□□ -1.75
ERVFC1-1P60608 SEC31A-209ENST00000500777 3610 ntTSL 5 BASIC4.13□□□□□ -1.75
ERVFC1-1P60608 GLCE-201ENST00000261858 5037 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
ERVFC1-1P60608 ERVW-1-201ENST00000493463 2925 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
ERVFC1-1P60608 DMXL2-203ENST00000543779 10400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.13□□□□□ -1.75
ERVFC1-1P60608 LINC01847-201ENST00000522627 5607 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
ERVFC1-1P60608 ARHGAP21-202ENST00000376410 3526 ntTSL 5 BASIC4.13□□□□□ -1.75
ERVFC1-1P60608 AFP-201ENST00000226359 1914 ntTSL 5 BASIC4.13□□□□□ -1.75
ERVFC1-1P60608 TNFAIP8-207ENST00000513374 1385 ntTSL 2 BASIC4.13□□□□□ -1.75
ERVFC1-1P60608 RGS5-201ENST00000313961 5862 ntAPPRIS P3 TSL 1 (best) BASIC4.13□□□□□ -1.75
ERVFC1-1P60608 KCNJ1-206ENST00000440599 2539 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
ERVFC1-1P60608 SAMSN1-206ENST00000619120 2028 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
ERVFC1-1P60608 AC010099.4-201ENST00000424515 1453 ntTSL 5 BASIC4.12□□□□□ -1.75
ERVFC1-1P60608 AP005901.5-201ENST00000545779 1796 ntBASIC4.12□□□□□ -1.75
ERVFC1-1P60608 STAG2-204ENST00000371157 5991 ntAPPRIS P3 TSL 1 (best) BASIC4.12□□□□□ -1.75
ERVFC1-1P60608 OR10Z1-202ENST00000641002 6323 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
ERVFC1-1P60608 RGS13-201ENST00000391995 1505 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
ERVFC1-1P60608 OPRM1-215ENST00000520708 1519 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
ERVFC1-1P60608 CCDC178-202ENST00000383096 3391 ntAPPRIS ALT2 TSL 5 BASIC4.12□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 119.5 ms