Protein–RNA interactions for Protein: P39086

GRIK1, Glutamate receptor ionotropic, kainate 1, humanhuman

Predictions only

Length 918 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GRIK1P39086 LINC00400-201ENST00000425609 547 ntTSL 3 BASIC6.37□□□□□ -1.39
GRIK1P39086 SPINK8-201ENST00000434006 444 ntAPPRIS P1 TSL 3 BASIC6.37□□□□□ -1.39
GRIK1P39086 TUBB4BP6-201ENST00000437576 479 ntBASIC6.37□□□□□ -1.39
GRIK1P39086 AL807757.1-201ENST00000437846 424 ntTSL 3 BASIC6.37□□□□□ -1.39
GRIK1P39086 CCDC17-203ENST00000445048 443 ntAPPRIS ALT2 TSL 1 (best) BASIC6.37□□□□□ -1.39
GRIK1P39086 AC087501.1-201ENST00000445617 715 ntTSL 5 BASIC6.37□□□□□ -1.39
GRIK1P39086 RAD23BP3-201ENST00000454157 1152 ntBASIC6.37□□□□□ -1.39
GRIK1P39086 SNORD42A-201ENST00000459584 64 ntBASIC6.37□□□□□ -1.39
GRIK1P39086 RPS4XP12-201ENST00000461747 709 ntBASIC6.37□□□□□ -1.39
GRIK1P39086 AC117386.1-201ENST00000474444 606 ntTSL 4 BASIC6.37□□□□□ -1.39
GRIK1P39086 RPS7P6-201ENST00000485777 579 ntBASIC6.37□□□□□ -1.39
GRIK1P39086 Metazoa_SRP.158-201ENST00000487171 294 ntBASIC6.37□□□□□ -1.39
GRIK1P39086 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC6.37□□□□□ -1.39
GRIK1P39086 HMGB1P44-201ENST00000508597 572 ntBASIC6.37□□□□□ -1.39
GRIK1P39086 AC105914.1-201ENST00000511798 226 ntBASIC6.37□□□□□ -1.39
GRIK1P39086 AC114781.3-201ENST00000512083 142 ntBASIC6.37□□□□□ -1.39
GRIK1P39086 SCARNA18.1-201ENST00000516330 83 ntBASIC6.37□□□□□ -1.39
GRIK1P39086 RNA5SP271-201ENST00000516700 88 ntBASIC6.37□□□□□ -1.39
GRIK1P39086 IGHVIII-47-1-201ENST00000518187 331 ntBASIC6.37□□□□□ -1.39
GRIK1P39086 TPM3P3-201ENST00000521343 354 ntBASIC6.37□□□□□ -1.39
GRIK1P39086 AP000424.2-201ENST00000523784 233 ntTSL 3 BASIC6.37□□□□□ -1.39
GRIK1P39086 AC013714.1-201ENST00000524707 747 ntTSL 3 BASIC6.37□□□□□ -1.39
GRIK1P39086 AC022075.3-201ENST00000539009 649 ntTSL 3 BASIC6.37□□□□□ -1.39
GRIK1P39086 AC068305.2-201ENST00000550567 1205 ntBASIC6.37□□□□□ -1.39
GRIK1P39086 AC087477.3-201ENST00000559214 552 ntTSL 4 BASIC6.37□□□□□ -1.39
GRIK1P39086 AC127502.1-204ENST00000564861 618 ntTSL 3 BASIC6.37□□□□□ -1.39
GRIK1P39086 AC008109.1-201ENST00000583163 826 ntTSL 2 BASIC6.37□□□□□ -1.39
GRIK1P39086 AC009220.3-201ENST00000604318 586 ntBASIC6.37□□□□□ -1.39
GRIK1P39086 AL139286.1-201ENST00000604465 483 ntBASIC6.37□□□□□ -1.39
GRIK1P39086 AP000238.1-201ENST00000608759 426 ntBASIC6.37□□□□□ -1.39
GRIK1P39086 AL590282.1-201ENST00000610379 1136 ntBASIC6.37□□□□□ -1.39
GRIK1P39086 MIR6809-201ENST00000612189 116 ntBASIC6.37□□□□□ -1.39
GRIK1P39086 MIR6793-201ENST00000612376 63 ntBASIC6.37□□□□□ -1.39
GRIK1P39086 AL592295.2-201ENST00000612578 206 ntBASIC6.37□□□□□ -1.39
GRIK1P39086 MIR6862-1-201ENST00000613016 70 ntBASIC6.37□□□□□ -1.39
GRIK1P39086 AL442067.1-201ENST00000613261 223 ntBASIC6.37□□□□□ -1.39
GRIK1P39086 MIR6862-2-201ENST00000614755 70 ntBASIC6.37□□□□□ -1.39
GRIK1P39086 ZNF75A-210ENST00000617839 1225 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
GRIK1P39086 AC069209.1-201ENST00000619282 651 ntBASIC6.37□□□□□ -1.39
GRIK1P39086 SATB1-209ENST00000454909 3755 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
GRIK1P39086 CACNB4-234ENST00000636785 3787 ntTSL 5 BASIC6.37□□□□□ -1.39
GRIK1P39086 MECOM-209ENST00000472280 3593 ntTSL 5 BASIC6.37□□□□□ -1.39
GRIK1P39086 AP002004.1-201ENST00000532510 3530 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
GRIK1P39086 LINC00309-201ENST00000431020 3307 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
GRIK1P39086 AC009404.1-201ENST00000420330 3090 ntTSL 3 BASIC6.37□□□□□ -1.39
GRIK1P39086 SEM1-202ENST00000356686 2667 ntTSL 5 BASIC6.37□□□□□ -1.39
GRIK1P39086 NSF-206ENST00000575068 2667 ntTSL 2 BASIC6.37□□□□□ -1.39
GRIK1P39086 ZC3H7A-214ENST00000575984 2632 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
GRIK1P39086 LINC02119-201ENST00000508853 2573 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
GRIK1P39086 OR2A12-202ENST00000641592 4163 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
GRIK1P39086 WDCP-201ENST00000295148 3817 ntAPPRIS P3 TSL 2 BASIC6.37□□□□□ -1.39
GRIK1P39086 AC012254.3-201ENST00000591183 2117 ntBASIC6.37□□□□□ -1.39
GRIK1P39086 ZNF146-201ENST00000443387 3326 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
GRIK1P39086 ZNF177-202ENST00000589262 1920 ntAPPRIS ALT2 TSL 2 BASIC6.37□□□□□ -1.39
GRIK1P39086 MRC1-201ENST00000569591 5198 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
GRIK1P39086 CFAP221-203ENST00000413369 2801 ntAPPRIS P1 TSL 5 BASIC6.36□□□□□ -1.39
GRIK1P39086 ATXN2-202ENST00000389153 3854 ntAPPRIS ALT2 TSL 5 BASIC6.36□□□□□ -1.39
GRIK1P39086 AL591135.1-201ENST00000401578 5914 ntBASIC6.36□□□□□ -1.39
GRIK1P39086 PIGA-206ENST00000542278 3626 ntAPPRIS P1 TSL 5 BASIC6.36□□□□□ -1.39
GRIK1P39086 CLCN3-204ENST00000504131 5592 ntTSL 5 BASIC6.36□□□□□ -1.39
GRIK1P39086 PHF7-211ENST00000615126 1328 ntTSL 5 BASIC6.36□□□□□ -1.39
GRIK1P39086 TAS2R9-201ENST00000240691 1075 ntAPPRIS P1 BASIC6.36□□□□□ -1.39
GRIK1P39086 GPR52-201ENST00000367685 1088 ntAPPRIS P1 BASIC6.36□□□□□ -1.39
GRIK1P39086 OR2W1-201ENST00000377175 1028 ntAPPRIS P1 BASIC6.36□□□□□ -1.39
GRIK1P39086 KRTAP27-1-201ENST00000382835 682 ntAPPRIS P1 BASIC6.36□□□□□ -1.39
GRIK1P39086 SNORA40.3-201ENST00000390964 122 ntBASIC6.36□□□□□ -1.39
GRIK1P39086 AL354733.1-204ENST00000412069 424 ntTSL 5 BASIC6.36□□□□□ -1.39
GRIK1P39086 AC009310.1-201ENST00000414414 451 ntBASIC6.36□□□□□ -1.39
GRIK1P39086 RPL26P29-201ENST00000415623 438 ntBASIC6.36□□□□□ -1.39
GRIK1P39086 LINC01347-201ENST00000417964 355 ntBASIC6.36□□□□□ -1.39
GRIK1P39086 USP9YP27-201ENST00000418455 438 ntBASIC6.36□□□□□ -1.39
GRIK1P39086 AC019050.1-201ENST00000418508 492 ntBASIC6.36□□□□□ -1.39
GRIK1P39086 AC234781.4-201ENST00000419384 244 ntBASIC6.36□□□□□ -1.39
GRIK1P39086 AC092647.1-201ENST00000420654 287 ntBASIC6.36□□□□□ -1.39
GRIK1P39086 TMEM246-AS1-202ENST00000425734 466 ntTSL 2 BASIC6.36□□□□□ -1.39
GRIK1P39086 RPL23AP4-201ENST00000427757 463 ntBASIC6.36□□□□□ -1.39
GRIK1P39086 AC079922.1-201ENST00000443291 359 ntBASIC6.36□□□□□ -1.39
GRIK1P39086 DIAPH2-AS1-202ENST00000445414 606 ntTSL 2 BASIC6.36□□□□□ -1.39
GRIK1P39086 AL139275.1-201ENST00000447315 824 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
GRIK1P39086 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC6.36□□□□□ -1.39
GRIK1P39086 RN7SL269P-201ENST00000467795 305 ntBASIC6.36□□□□□ -1.39
GRIK1P39086 AC021205.1-201ENST00000468797 348 ntBASIC6.36□□□□□ -1.39
GRIK1P39086 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC6.36□□□□□ -1.39
GRIK1P39086 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC6.36□□□□□ -1.39
GRIK1P39086 AC112196.1-201ENST00000515092 832 ntTSL 3 BASIC6.36□□□□□ -1.39
GRIK1P39086 LINCR-0001-202ENST00000518098 524 ntTSL 4 BASIC6.36□□□□□ -1.39
GRIK1P39086 AC013644.1-202ENST00000523166 499 ntTSL 2 BASIC6.36□□□□□ -1.39
GRIK1P39086 AP005597.4-201ENST00000526762 229 ntBASIC6.36□□□□□ -1.39
GRIK1P39086 AL356215.1-201ENST00000528366 1102 ntTSL 2 BASIC6.36□□□□□ -1.39
GRIK1P39086 PDCD5P1-201ENST00000543528 309 ntBASIC6.36□□□□□ -1.39
GRIK1P39086 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC6.36□□□□□ -1.39
GRIK1P39086 BLOC1S6-209ENST00000565409 616 ntTSL 4 BASIC6.36□□□□□ -1.39
GRIK1P39086 AC107954.1-201ENST00000565906 727 ntBASIC6.36□□□□□ -1.39
GRIK1P39086 AC004448.4-204ENST00000585389 743 ntTSL 5 BASIC6.36□□□□□ -1.39
GRIK1P39086 Z98949.1-204ENST00000595102 731 ntTSL 5 BASIC6.36□□□□□ -1.39
GRIK1P39086 AC008395.1-201ENST00000601752 607 ntTSL 5 BASIC6.36□□□□□ -1.39
GRIK1P39086 AC016747.2-201ENST00000605902 364 ntTSL 2 BASIC6.36□□□□□ -1.39
GRIK1P39086 AP001506.1-201ENST00000615444 211 ntBASIC6.36□□□□□ -1.39
GRIK1P39086 SUPT3H-206ENST00000637763 498 ntTSL 3 BASIC6.36□□□□□ -1.39
GRIK1P39086 ZNF571-202ENST00000358744 2049 ntAPPRIS P1 TSL 2 BASIC6.36□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 12.3 ms