Protein–RNA interactions for Protein: P31276

HOXC13, Homeobox protein Hox-C13, humanhuman

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC13P31276 LINC00907-208ENST00000593051 1092 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
HOXC13P31276 FAM27B-201ENST00000610601 213 ntBASIC4.92□□□□□ -1.62
HOXC13P31276 CC2D2B-209ENST00000618242 980 ntTSL 5 BASIC4.92□□□□□ -1.62
HOXC13P31276 AC048344.4-201ENST00000619744 527 ntBASIC4.92□□□□□ -1.62
HOXC13P31276 AC011944.2-201ENST00000624440 683 ntBASIC4.92□□□□□ -1.62
HOXC13P31276 KSR2-202ENST00000425217 17008 ntTSL 5 BASIC4.92□□□□□ -1.62
HOXC13P31276 DNAH8-201ENST00000327475 14360 ntAPPRIS P2 TSL 5 BASIC4.92□□□□□ -1.62
HOXC13P31276 ZNF28-204ENST00000457749 4556 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
HOXC13P31276 USP44-208ENST00000552440 1818 ntTSL 5 BASIC4.92□□□□□ -1.62
HOXC13P31276 NSD1-204ENST00000439151 12892 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
HOXC13P31276 AC138393.1-206ENST00000540997 1886 ntBASIC4.92□□□□□ -1.62
HOXC13P31276 ZBTB21-201ENST00000310826 7449 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
HOXC13P31276 OR6B1-202ENST00000641698 5153 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
HOXC13P31276 AL445623.2-201ENST00000640307 4805 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
HOXC13P31276 SSR1-202ENST00000397511 3248 ntTSL 5 BASIC4.91□□□□□ -1.62
HOXC13P31276 LINC01085-201ENST00000502759 1984 ntTSL 2 BASIC4.91□□□□□ -1.62
HOXC13P31276 RAP1GDS1-205ENST00000408927 3681 ntAPPRIS P3 TSL 2 BASIC4.91□□□□□ -1.62
HOXC13P31276 HSP90AA5P-201ENST00000438353 2192 ntBASIC4.91□□□□□ -1.62
HOXC13P31276 CUL3-216ENST00000617432 1426 ntTSL 5 BASIC4.91□□□□□ -1.62
HOXC13P31276 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
HOXC13P31276 RLIM-201ENST00000332687 8317 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
HOXC13P31276 ANXA1-202ENST00000376911 2209 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
HOXC13P31276 NME5-201ENST00000265191 1198 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
HOXC13P31276 OR4K15-201ENST00000305051 1216 ntBASIC4.91□□□□□ -1.62
HOXC13P31276 U3.15-201ENST00000365398 212 ntBASIC4.91□□□□□ -1.62
HOXC13P31276 MIR142-201ENST00000384835 87 ntBASIC4.91□□□□□ -1.62
HOXC13P31276 HMGB1P13-201ENST00000406019 642 ntBASIC4.91□□□□□ -1.62
HOXC13P31276 TATDN1P1-201ENST00000414123 891 ntBASIC4.91□□□□□ -1.62
HOXC13P31276 AF240627.1-201ENST00000416002 879 ntTSL 3 BASIC4.91□□□□□ -1.62
HOXC13P31276 E2F6P2-201ENST00000420708 748 ntBASIC4.91□□□□□ -1.62
HOXC13P31276 DPYD-AS2-201ENST00000422259 788 ntTSL 3 BASIC4.91□□□□□ -1.62
HOXC13P31276 AC009226.1-201ENST00000432413 539 ntTSL 3 BASIC4.91□□□□□ -1.62
HOXC13P31276 ELOCP11-201ENST00000436690 332 ntBASIC4.91□□□□□ -1.62
HOXC13P31276 TRIM60P9Y-201ENST00000438459 816 ntBASIC4.91□□□□□ -1.62
HOXC13P31276 AL353093.1-201ENST00000441292 436 ntBASIC4.91□□□□□ -1.62
HOXC13P31276 ELOCP16-201ENST00000444494 332 ntBASIC4.91□□□□□ -1.62
HOXC13P31276 TRIM60P11Y-201ENST00000445313 801 ntBASIC4.91□□□□□ -1.62
HOXC13P31276 AC239367.2-201ENST00000447309 705 ntBASIC4.91□□□□□ -1.62
HOXC13P31276 AC017099.1-201ENST00000448261 1028 ntBASIC4.91□□□□□ -1.62
HOXC13P31276 AL353718.1-201ENST00000451028 517 ntBASIC4.91□□□□□ -1.62
HOXC13P31276 LINC01206-203ENST00000476815 482 ntTSL 3 BASIC4.91□□□□□ -1.62
HOXC13P31276 FTH1P24-201ENST00000503502 462 ntBASIC4.91□□□□□ -1.62
HOXC13P31276 AC091868.1-201ENST00000508746 304 ntBASIC4.91□□□□□ -1.62
HOXC13P31276 RNA5SP303-201ENST00000516192 130 ntBASIC4.91□□□□□ -1.62
HOXC13P31276 MFAP5-205ENST00000535336 566 ntTSL 4 BASIC4.91□□□□□ -1.62
HOXC13P31276 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC4.91□□□□□ -1.62
HOXC13P31276 AC064805.2-201ENST00000582959 523 ntTSL 4 BASIC4.91□□□□□ -1.62
HOXC13P31276 AC005537.1-201ENST00000588324 1238 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
HOXC13P31276 AC067852.4-201ENST00000590314 478 ntBASIC4.91□□□□□ -1.62
HOXC13P31276 AC067959.1-201ENST00000604334 379 ntBASIC4.91□□□□□ -1.62
HOXC13P31276 KATNBL1P5-201ENST00000605015 517 ntBASIC4.91□□□□□ -1.62
HOXC13P31276 STARD13-AS-235ENST00000609335 855 ntTSL 5 BASIC4.91□□□□□ -1.62
HOXC13P31276 AC006338.2-201ENST00000616864 791 ntBASIC4.91□□□□□ -1.62
HOXC13P31276 OR4K15-202ENST00000641512 1216 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
HOXC13P31276 AC018529.3-201ENST00000624212 2254 ntBASIC4.91□□□□□ -1.62
HOXC13P31276 OR8H2-203ENST00000641311 3092 ntAPPRIS P2 BASIC4.91□□□□□ -1.62
HOXC13P31276 RDH10-AS1-201ENST00000514599 3261 ntTSL 2 BASIC4.91□□□□□ -1.62
HOXC13P31276 R3HDM1-201ENST00000264160 4648 ntAPPRIS P3 TSL 1 (best) BASIC4.91□□□□□ -1.62
HOXC13P31276 PIGN-245ENST00000640252 7924 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
HOXC13P31276 KAT6B-201ENST00000287239 8287 ntAPPRIS P3 TSL 1 (best) BASIC4.9□□□□□ -1.62
HOXC13P31276 SCN11A-203ENST00000456224 5262 ntAPPRIS ALT2 TSL 5 BASIC4.9□□□□□ -1.62
HOXC13P31276 SYCP1-210ENST00000618516 3109 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
HOXC13P31276 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
HOXC13P31276 PCDH9-201ENST00000377861 28227 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
HOXC13P31276 AL049737.1-201ENST00000413920 1403 ntBASIC4.9□□□□□ -1.62
HOXC13P31276 MFSD8-220ENST00000641243 1422 ntBASIC4.9□□□□□ -1.62
HOXC13P31276 ARHGAP42P3-201ENST00000443989 2508 ntBASIC4.9□□□□□ -1.62
HOXC13P31276 GOLPH3L-201ENST00000271732 2999 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
HOXC13P31276 AL442639.1-201ENST00000625030 1899 ntBASIC4.9□□□□□ -1.62
HOXC13P31276 FAP-203ENST00000443424 2598 ntTSL 2 BASIC4.9□□□□□ -1.62
HOXC13P31276 AC000374.1-201ENST00000434698 1745 ntBASIC4.9□□□□□ -1.62
HOXC13P31276 STARD9-201ENST00000290607 15567 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.62
HOXC13P31276 SNORD113.2-201ENST00000364166 89 ntBASIC4.9□□□□□ -1.63
HOXC13P31276 SPINK9-201ENST00000377906 453 ntAPPRIS P2 TSL 1 (best) BASIC4.9□□□□□ -1.63
HOXC13P31276 MIR129-1-201ENST00000384972 72 ntBASIC4.9□□□□□ -1.63
HOXC13P31276 AP000580.1-201ENST00000404439 358 ntBASIC4.9□□□□□ -1.63
HOXC13P31276 AL731575.1-201ENST00000413564 418 ntTSL 2 BASIC4.9□□□□□ -1.63
HOXC13P31276 XKRYP4-201ENST00000414395 483 ntBASIC4.9□□□□□ -1.63
HOXC13P31276 MTND2P15-201ENST00000418575 892 ntBASIC4.9□□□□□ -1.63
HOXC13P31276 AL078581.1-201ENST00000419134 340 ntTSL 5 BASIC4.9□□□□□ -1.63
HOXC13P31276 MTND2P11-201ENST00000423638 648 ntBASIC4.9□□□□□ -1.63
HOXC13P31276 OR2AH1P-201ENST00000425717 928 ntBASIC4.9□□□□□ -1.63
HOXC13P31276 KCND3-IT1-201ENST00000439736 376 ntTSL 3 BASIC4.9□□□□□ -1.63
HOXC13P31276 XKRYP5-201ENST00000449659 483 ntBASIC4.9□□□□□ -1.63
HOXC13P31276 MTND2P30-201ENST00000456663 382 ntBASIC4.9□□□□□ -1.63
HOXC13P31276 MTND2P28-201ENST00000457540 1044 ntBASIC4.9□□□□□ -1.63
HOXC13P31276 TPT1P1-201ENST00000458495 518 ntBASIC4.9□□□□□ -1.63
HOXC13P31276 AC010618.1-201ENST00000469924 477 ntBASIC4.9□□□□□ -1.63
HOXC13P31276 AC068633.1-201ENST00000482142 787 ntTSL 5 BASIC4.9□□□□□ -1.63
HOXC13P31276 BTBD11-206ENST00000494235 811 ntTSL 2 BASIC4.9□□□□□ -1.63
HOXC13P31276 OR52Z1-201ENST00000510471 897 ntAPPRIS P1 BASIC4.9□□□□□ -1.63
HOXC13P31276 OR5H4P-201ENST00000510851 923 ntBASIC4.9□□□□□ -1.63
HOXC13P31276 AC009446.1-202ENST00000521131 473 ntTSL 3 BASIC4.9□□□□□ -1.63
HOXC13P31276 AP003400.1-201ENST00000528319 231 ntTSL 5 BASIC4.9□□□□□ -1.63
HOXC13P31276 OR8A2P-201ENST00000528631 952 ntBASIC4.9□□□□□ -1.63
HOXC13P31276 AC084824.1-201ENST00000550917 1005 ntBASIC4.9□□□□□ -1.63
HOXC13P31276 LINC02316-201ENST00000553346 768 ntTSL 3 BASIC4.9□□□□□ -1.63
HOXC13P31276 AC073878.2-201ENST00000565449 385 ntTSL 3 BASIC4.9□□□□□ -1.63
HOXC13P31276 AC023575.1-201ENST00000580510 358 ntBASIC4.9□□□□□ -1.63
HOXC13P31276 LINC01533-202ENST00000588694 632 ntTSL 2 BASIC4.9□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 138.3 ms