Protein–RNA interactions for Protein: P20908

COL5A1, Collagen alpha-1(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,838 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1P20908 CYP1B1-AS1-202ENST00000427168 484 ntTSL 4 BASIC3.93□□□□□ -1.78
COL5A1P20908 TAF1A-AS1-202ENST00000427540 750 ntTSL 2 BASIC3.93□□□□□ -1.78
COL5A1P20908 GEMIN8P3-201ENST00000445417 720 ntBASIC3.93□□□□□ -1.78
COL5A1P20908 PSMC1P13-201ENST00000458195 985 ntBASIC3.93□□□□□ -1.78
COL5A1P20908 RPL29P14-201ENST00000495837 428 ntBASIC3.93□□□□□ -1.78
COL5A1P20908 TRAPPC2P2-201ENST00000517589 409 ntBASIC3.93□□□□□ -1.78
COL5A1P20908 HSPE1P5-201ENST00000561489 272 ntBASIC3.93□□□□□ -1.78
COL5A1P20908 AC023932.1-201ENST00000582726 429 ntTSL 3 BASIC3.93□□□□□ -1.78
COL5A1P20908 THRA1/BTR-203ENST00000604191 571 ntTSL 4 BASIC3.93□□□□□ -1.78
COL5A1P20908 AC015722.2-201ENST00000622210 551 ntBASIC3.93□□□□□ -1.78
COL5A1P20908 DDX18P4-201ENST00000511690 1966 ntBASIC3.93□□□□□ -1.78
COL5A1P20908 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC3.93□□□□□ -1.78
COL5A1P20908 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC3.93□□□□□ -1.78
COL5A1P20908 KIAA1456-203ENST00000524591 9587 ntAPPRIS P1 TSL 5 BASIC3.93□□□□□ -1.78
COL5A1P20908 LRRC39-202ENST00000370137 1396 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
COL5A1P20908 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
COL5A1P20908 BCLAF1-207ENST00000527759 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC3.93□□□□□ -1.78
COL5A1P20908 FGD4-210ENST00000525053 2925 ntTSL 2 BASIC3.93□□□□□ -1.78
COL5A1P20908 AC024560.2-201ENST00000507981 1497 ntBASIC3.93□□□□□ -1.78
COL5A1P20908 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC3.93□□□□□ -1.78
COL5A1P20908 GABRA2-205ENST00000507069 1562 ntTSL 3 BASIC3.93□□□□□ -1.78
COL5A1P20908 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC3.93□□□□□ -1.78
COL5A1P20908 PTPRC-209ENST00000442510 5164 ntAPPRIS P4 TSL 1 (best) BASIC3.93□□□□□ -1.78
COL5A1P20908 PCDH15-209ENST00000395433 6942 ntTSL 5 BASIC3.93□□□□□ -1.78
COL5A1P20908 EIF2AK2-201ENST00000233057 10042 ntAPPRIS P1 TSL 2 BASIC3.93□□□□□ -1.78
COL5A1P20908 RABGAP1L-205ENST00000367687 1849 ntTSL 2 BASIC3.93□□□□□ -1.78
COL5A1P20908 AC093849.1-201ENST00000563631 2209 ntBASIC3.93□□□□□ -1.78
COL5A1P20908 PPBP-201ENST00000296028 715 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
COL5A1P20908 RNA5SP97-201ENST00000365006 84 ntBASIC3.93□□□□□ -1.78
COL5A1P20908 DPRX-201ENST00000376650 648 ntAPPRIS P1 TSL 3 BASIC3.93□□□□□ -1.78
COL5A1P20908 AP000907.1-201ENST00000428428 510 ntBASIC3.93□□□□□ -1.78
COL5A1P20908 LINC00348-201ENST00000428761 948 ntTSL 3 BASIC3.93□□□□□ -1.78
COL5A1P20908 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC3.93□□□□□ -1.78
COL5A1P20908 LINC00377-201ENST00000456588 657 ntTSL 5 BASIC3.93□□□□□ -1.78
COL5A1P20908 AL353633.1-201ENST00000458480 382 ntTSL 3 BASIC3.93□□□□□ -1.78
COL5A1P20908 GAPDHP36-201ENST00000480688 918 ntBASIC3.93□□□□□ -1.78
COL5A1P20908 RPS4XP15-201ENST00000489210 795 ntBASIC3.93□□□□□ -1.78
COL5A1P20908 NAT2-202ENST00000520116 716 ntTSL 3 BASIC3.93□□□□□ -1.78
COL5A1P20908 AL355076.2-201ENST00000555736 544 ntTSL 5 BASIC3.93□□□□□ -1.78
COL5A1P20908 AC010601.1-202ENST00000567304 547 ntTSL 4 BASIC3.93□□□□□ -1.78
COL5A1P20908 TNFAIP6-201ENST00000243347 1424 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
COL5A1P20908 RABGAP1L-206ENST00000367688 1425 ntTSL 2 BASIC3.93□□□□□ -1.78
COL5A1P20908 PWRN2-202ENST00000567246 4295 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
COL5A1P20908 DDHD2-202ENST00000517385 4113 ntTSL 2 BASIC3.92□□□□□ -1.78
COL5A1P20908 FAM91A3P-201ENST00000456826 2544 ntBASIC3.92□□□□□ -1.78
COL5A1P20908 ACADSB-201ENST00000358776 5859 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
COL5A1P20908 NADK2-203ENST00000397338 3614 ntTSL 2 BASIC3.92□□□□□ -1.78
COL5A1P20908 FAM230B-202ENST00000415704 396 ntTSL 3 BASIC3.92□□□□□ -1.78
COL5A1P20908 AL590006.1-201ENST00000417390 752 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
COL5A1P20908 AC079117.1-201ENST00000445178 1000 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
COL5A1P20908 PPIAP15-201ENST00000479662 484 ntBASIC3.92□□□□□ -1.78
COL5A1P20908 RPL7P24-201ENST00000493052 752 ntBASIC3.92□□□□□ -1.78
COL5A1P20908 PRR16-204ENST00000505123 1298 ntTSL 3 BASIC3.92□□□□□ -1.78
COL5A1P20908 AC074250.1-201ENST00000511117 192 ntBASIC3.92□□□□□ -1.78
COL5A1P20908 AP003472.1-201ENST00000519844 644 ntTSL 3 BASIC3.92□□□□□ -1.78
COL5A1P20908 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC3.92□□□□□ -1.78
COL5A1P20908 AC025265.2-201ENST00000551905 478 ntTSL 3 BASIC3.92□□□□□ -1.78
COL5A1P20908 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC3.92□□□□□ -1.78
COL5A1P20908 AC005412.1-201ENST00000580812 1049 ntBASIC3.92□□□□□ -1.78
COL5A1P20908 LINC01470-205ENST00000584829 681 ntTSL 3 BASIC3.92□□□□□ -1.78
COL5A1P20908 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC3.92□□□□□ -1.78
COL5A1P20908 AL008729.1-201ENST00000606627 553 ntTSL 4 BASIC3.92□□□□□ -1.78
COL5A1P20908 CT45A10-202ENST00000617981 578 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
COL5A1P20908 CT45A7-202ENST00000620885 578 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
COL5A1P20908 FP236240.3-201ENST00000623061 327 ntBASIC3.92□□□□□ -1.78
COL5A1P20908 AP001002.2-201ENST00000625137 386 ntBASIC3.92□□□□□ -1.78
COL5A1P20908 MTHFD2L-201ENST00000325278 2300 ntAPPRIS ALT2 TSL 5 BASIC3.92□□□□□ -1.78
COL5A1P20908 STAMBPL1-202ENST00000371924 2208 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
COL5A1P20908 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC3.91□□□□□ -1.78
COL5A1P20908 TRAT1-201ENST00000295756 1919 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
COL5A1P20908 TCN1-201ENST00000257264 1582 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
COL5A1P20908 FP236241.1-201ENST00000623374 7632 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
COL5A1P20908 CU633967.1-211ENST00000624444 7628 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
COL5A1P20908 HEATR1-203ENST00000366582 8447 ntAPPRIS P1 TSL 5 BASIC3.91□□□□□ -1.78
COL5A1P20908 LINC00561-201ENST00000565815 2738 ntBASIC3.91□□□□□ -1.78
COL5A1P20908 PCDH11X-204ENST00000373088 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC3.91□□□□□ -1.78
COL5A1P20908 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
COL5A1P20908 RNA5SP399-201ENST00000364003 117 ntBASIC3.91□□□□□ -1.78
COL5A1P20908 CTNNAL1-203ENST00000374594 824 ntTSL 3 BASIC3.91□□□□□ -1.78
COL5A1P20908 MIR183-201ENST00000384958 110 ntBASIC3.91□□□□□ -1.78
COL5A1P20908 SNORD66.1-201ENST00000391230 76 ntBASIC3.91□□□□□ -1.78
COL5A1P20908 TTTY12-201ENST00000413466 979 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
COL5A1P20908 RPS4XP12-201ENST00000461747 709 ntBASIC3.91□□□□□ -1.78
COL5A1P20908 NECTIN3-AS1-202ENST00000467426 664 ntTSL 3 BASIC3.91□□□□□ -1.78
COL5A1P20908 KRT19P6-201ENST00000510983 209 ntBASIC3.91□□□□□ -1.78
COL5A1P20908 THUMPD3-AS1-210ENST00000519043 1115 ntTSL 3 BASIC3.91□□□□□ -1.78
COL5A1P20908 AP002812.2-201ENST00000525594 585 ntTSL 4 BASIC3.91□□□□□ -1.78
COL5A1P20908 AL354920.1-202ENST00000531661 1017 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
COL5A1P20908 AC013437.1-201ENST00000549878 414 ntTSL 3 BASIC3.91□□□□□ -1.78
COL5A1P20908 AC006272.2-201ENST00000594725 163 ntBASIC3.91□□□□□ -1.78
COL5A1P20908 AC097467.3-204ENST00000595229 827 ntTSL 5 BASIC3.91□□□□□ -1.78
COL5A1P20908 QTRT1P1-201ENST00000604344 1078 ntBASIC3.91□□□□□ -1.78
COL5A1P20908 AL356515.1-201ENST00000611081 415 ntTSL 3 BASIC3.91□□□□□ -1.78
COL5A1P20908 MIR3651-201ENST00000630427 90 ntBASIC3.91□□□□□ -1.78
COL5A1P20908 SRRM1-203ENST00000447431 3691 ntAPPRIS ALT2 TSL 5 BASIC3.91□□□□□ -1.78
COL5A1P20908 TPH1-201ENST00000250018 5325 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
COL5A1P20908 CRISP1-204ENST00000507853 1793 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
COL5A1P20908 PIK3C3-201ENST00000262039 9443 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
COL5A1P20908 CACNB4-243ENST00000637217 8188 ntTSL 5 BASIC3.91□□□□□ -1.78
COL5A1P20908 HDAC9-204ENST00000406451 9705 ntAPPRIS ALT1 TSL 1 (best) BASIC3.91□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 95.9 ms