Protein–RNA interactions for Protein: P13765

HLA-DOB, HLA class II histocompatibility antigen, DO beta chain, humanhuman

Predictions only

Length 273 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOBP13765 PSG6-202ENST00000292125 1391 ntAPPRIS P3 TSL 1 (best) BASIC4.33□□□□□ -1.72
HLA-DOBP13765 C9orf135-AS1-201ENST00000439418 1375 ntTSL 2 BASIC4.33□□□□□ -1.72
HLA-DOBP13765 ZNF652P1-201ENST00000442420 1309 ntBASIC4.33□□□□□ -1.72
HLA-DOBP13765 DDX18P5-201ENST00000534547 1306 ntBASIC4.33□□□□□ -1.72
HLA-DOBP13765 AC008549.2-201ENST00000333482 706 ntBASIC4.33□□□□□ -1.72
HLA-DOBP13765 RNU6-1339P-201ENST00000363574 91 ntBASIC4.33□□□□□ -1.72
HLA-DOBP13765 MIR525-201ENST00000384978 85 ntBASIC4.33□□□□□ -1.72
HLA-DOBP13765 TRGV11-201ENST00000390340 463 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
HLA-DOBP13765 AC004543.1-201ENST00000418764 369 ntTSL 5 BASIC4.33□□□□□ -1.72
HLA-DOBP13765 AC027644.1-201ENST00000419595 298 ntBASIC4.33□□□□□ -1.72
HLA-DOBP13765 AL078590.2-202ENST00000422736 568 ntTSL 3 BASIC4.33□□□□□ -1.72
HLA-DOBP13765 ZDHHC20P2-201ENST00000424108 429 ntBASIC4.33□□□□□ -1.72
HLA-DOBP13765 EIF4HP2-201ENST00000424380 563 ntBASIC4.33□□□□□ -1.72
HLA-DOBP13765 AC087857.1-201ENST00000425894 467 ntTSL 3 BASIC4.33□□□□□ -1.72
HLA-DOBP13765 LINC00458-202ENST00000427299 1030 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
HLA-DOBP13765 AL034405.1-201ENST00000432062 526 ntTSL 2 BASIC4.33□□□□□ -1.72
HLA-DOBP13765 CEACAMP7-201ENST00000444105 496 ntBASIC4.33□□□□□ -1.72
HLA-DOBP13765 MYO5BP2-201ENST00000449815 1277 ntBASIC4.33□□□□□ -1.72
HLA-DOBP13765 EIF4EBP2P1-201ENST00000450009 343 ntBASIC4.33□□□□□ -1.72
HLA-DOBP13765 RHEBP2-201ENST00000450289 600 ntBASIC4.33□□□□□ -1.72
HLA-DOBP13765 AL035446.1-201ENST00000455011 453 ntTSL 5 BASIC4.33□□□□□ -1.72
HLA-DOBP13765 DAP3-209ENST00000465375 729 ntTSL 2 BASIC4.33□□□□□ -1.72
HLA-DOBP13765 AC091959.2-201ENST00000477363 321 ntBASIC4.33□□□□□ -1.72
HLA-DOBP13765 MTND2P14-201ENST00000482139 351 ntBASIC4.33□□□□□ -1.72
HLA-DOBP13765 LINC02027-201ENST00000482617 596 ntTSL 5 BASIC4.33□□□□□ -1.72
HLA-DOBP13765 RN7SL558P-201ENST00000497468 299 ntBASIC4.33□□□□□ -1.72
HLA-DOBP13765 LINC02466-202ENST00000509105 653 ntTSL 3 BASIC4.33□□□□□ -1.72
HLA-DOBP13765 AC106894.1-201ENST00000511735 451 ntTSL 5 BASIC4.33□□□□□ -1.72
HLA-DOBP13765 AC097535.1-201ENST00000515263 332 ntTSL 3 BASIC4.33□□□□□ -1.72
HLA-DOBP13765 Y_RNA.719-201ENST00000517156 106 ntBASIC4.33□□□□□ -1.72
HLA-DOBP13765 RNU6-709P-201ENST00000517257 104 ntBASIC4.33□□□□□ -1.72
HLA-DOBP13765 AC105180.1-201ENST00000523317 426 ntTSL 3 BASIC4.33□□□□□ -1.72
HLA-DOBP13765 OR5AZ1P-201ENST00000527448 943 ntBASIC4.33□□□□□ -1.72
HLA-DOBP13765 AC073172.2-201ENST00000527770 571 ntTSL 4 BASIC4.33□□□□□ -1.72
HLA-DOBP13765 HTN3-205ENST00000530128 775 ntAPPRIS P2 TSL 2 BASIC4.33□□□□□ -1.72
HLA-DOBP13765 AP001970.1-201ENST00000531681 701 ntTSL 3 BASIC4.33□□□□□ -1.72
HLA-DOBP13765 AP001775.2-201ENST00000531710 334 ntTSL 2 BASIC4.33□□□□□ -1.72
HLA-DOBP13765 SDHAF2-205ENST00000537782 559 ntTSL 4 BASIC4.33□□□□□ -1.72
HLA-DOBP13765 AC244502.1-203ENST00000541008 576 ntTSL 4 BASIC4.33□□□□□ -1.72
HLA-DOBP13765 AC091515.1-201ENST00000548110 679 ntBASIC4.33□□□□□ -1.72
HLA-DOBP13765 AC009094.1-201ENST00000564443 426 ntBASIC4.33□□□□□ -1.72
HLA-DOBP13765 AC093249.4-201ENST00000564755 259 ntBASIC4.33□□□□□ -1.72
HLA-DOBP13765 AGGF1P6-201ENST00000569213 976 ntBASIC4.33□□□□□ -1.72
HLA-DOBP13765 AC010761.5-201ENST00000579468 287 ntTSL 3 BASIC4.33□□□□□ -1.72
HLA-DOBP13765 AC107926.1-201ENST00000581673 621 ntTSL 3 BASIC4.33□□□□□ -1.72
HLA-DOBP13765 AC069366.1-201ENST00000583159 838 ntBASIC4.33□□□□□ -1.72
HLA-DOBP13765 AP001542.2-201ENST00000593141 364 ntBASIC4.33□□□□□ -1.72
HLA-DOBP13765 ZNF92P3-201ENST00000596594 954 ntBASIC4.33□□□□□ -1.72
HLA-DOBP13765 EIF1P6-201ENST00000600054 334 ntBASIC4.33□□□□□ -1.72
HLA-DOBP13765 AC091057.2-201ENST00000602594 792 ntBASIC4.33□□□□□ -1.72
HLA-DOBP13765 AC021749.1-201ENST00000604322 607 ntBASIC4.33□□□□□ -1.72
HLA-DOBP13765 AP001521.2-201ENST00000608772 546 ntBASIC4.33□□□□□ -1.72
HLA-DOBP13765 U6.48-201ENST00000618523 106 ntBASIC4.33□□□□□ -1.72
HLA-DOBP13765 AC012414.7-202ENST00000622705 1090 ntBASIC4.33□□□□□ -1.72
HLA-DOBP13765 AC018445.2-201ENST00000622987 260 ntBASIC4.33□□□□□ -1.72
HLA-DOBP13765 GABRG2-224ENST00000640574 3150 ntTSL 5 BASIC4.33□□□□□ -1.72
HLA-DOBP13765 GOLPH3L-201ENST00000271732 2999 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
HLA-DOBP13765 PCDH15-212ENST00000395442 2970 ntTSL 5 BASIC4.33□□□□□ -1.72
HLA-DOBP13765 GABRG2-214ENST00000639111 11735 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
HLA-DOBP13765 PSMA4-201ENST00000044462 4411 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
HLA-DOBP13765 AC068870.3-201ENST00000625077 2536 ntBASIC4.33□□□□□ -1.72
HLA-DOBP13765 ASAH2-204ENST00000447815 2311 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
HLA-DOBP13765 C3orf58-202ENST00000441925 3260 ntTSL 2 BASIC4.33□□□□□ -1.72
HLA-DOBP13765 PRUNE2-208ENST00000443509 12356 ntAPPRIS ALT2 TSL 5 BASIC4.32□□□□□ -1.72
HLA-DOBP13765 FAM135A-210ENST00000505868 5173 ntTSL 5 BASIC4.32□□□□□ -1.72
HLA-DOBP13765 LIMA1-214ENST00000552783 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC4.32□□□□□ -1.72
HLA-DOBP13765 R3HDM1-201ENST00000264160 4648 ntAPPRIS P3 TSL 1 (best) BASIC4.32□□□□□ -1.72
HLA-DOBP13765 LANCL1-204ENST00000441020 4503 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
HLA-DOBP13765 IRAK1BP1-204ENST00000607739 1387 ntTSL 2 BASIC4.32□□□□□ -1.72
HLA-DOBP13765 MYB-239ENST00000534121 2238 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
HLA-DOBP13765 KIF3A-203ENST00000403231 2181 ntTSL 2 BASIC4.32□□□□□ -1.72
HLA-DOBP13765 MTERF1-203ENST00000419292 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC4.32□□□□□ -1.72
HLA-DOBP13765 TEX11-201ENST00000344304 2977 ntAPPRIS P3 TSL 5 BASIC4.32□□□□□ -1.72
HLA-DOBP13765 DEFB115-201ENST00000400552 267 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
HLA-DOBP13765 ELOCP9-201ENST00000418624 239 ntBASIC4.32□□□□□ -1.72
HLA-DOBP13765 E2F6P2-201ENST00000420708 748 ntBASIC4.32□□□□□ -1.72
HLA-DOBP13765 OR2AM1P-201ENST00000422137 422 ntBASIC4.32□□□□□ -1.72
HLA-DOBP13765 EDNRB-AS1-201ENST00000422405 601 ntTSL 5 BASIC4.32□□□□□ -1.72
HLA-DOBP13765 Z97206.2-201ENST00000423489 589 ntTSL 3 BASIC4.32□□□□□ -1.72
HLA-DOBP13765 LINC00502-201ENST00000423621 445 ntTSL 3 BASIC4.32□□□□□ -1.72
HLA-DOBP13765 CKS1BP6-201ENST00000424932 240 ntBASIC4.32□□□□□ -1.72
HLA-DOBP13765 DPH5-204ENST00000427040 609 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
HLA-DOBP13765 AC090505.2-201ENST00000427064 464 ntTSL 3 BASIC4.32□□□□□ -1.72
HLA-DOBP13765 RAC1P8-201ENST00000427086 527 ntBASIC4.32□□□□□ -1.72
HLA-DOBP13765 MGAT2P2-201ENST00000427194 797 ntBASIC4.32□□□□□ -1.72
HLA-DOBP13765 CDY14P-201ENST00000431260 1014 ntBASIC4.32□□□□□ -1.72
HLA-DOBP13765 AC007556.1-201ENST00000432133 307 ntTSL 2 BASIC4.32□□□□□ -1.72
HLA-DOBP13765 LINC01506-201ENST00000432148 495 ntTSL 2 BASIC4.32□□□□□ -1.72
HLA-DOBP13765 AC008568.1-203ENST00000433406 765 ntTSL 3 BASIC4.32□□□□□ -1.72
HLA-DOBP13765 CDY12P-201ENST00000440679 1015 ntBASIC4.32□□□□□ -1.72
HLA-DOBP13765 AL049552.1-201ENST00000444302 577 ntTSL 2 BASIC4.32□□□□□ -1.72
HLA-DOBP13765 SETD6P1-201ENST00000444575 317 ntBASIC4.32□□□□□ -1.72
HLA-DOBP13765 Z73495.1-201ENST00000444982 147 ntTSL 3 BASIC4.32□□□□□ -1.72
HLA-DOBP13765 CDY13P-201ENST00000445813 1015 ntBASIC4.32□□□□□ -1.72
HLA-DOBP13765 PRKACB-213ENST00000446538 1112 ntTSL 2 BASIC4.32□□□□□ -1.72
HLA-DOBP13765 OR6K5P-201ENST00000447050 945 ntBASIC4.32□□□□□ -1.72
HLA-DOBP13765 PTENP1-201ENST00000447117 1215 ntBASIC4.32□□□□□ -1.72
HLA-DOBP13765 AC005002.1-201ENST00000447458 540 ntBASIC4.32□□□□□ -1.72
HLA-DOBP13765 CDY23P-201ENST00000451661 1014 ntBASIC4.32□□□□□ -1.72
HLA-DOBP13765 NPM1P13-201ENST00000452663 865 ntBASIC4.32□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 107.6 ms