Protein–RNA interactions for Protein: P12110

COL6A2, Collagen alpha-2(VI) chain, humanhuman

Predictions only

Length 1,019 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2P12110 INO80-AS1-201ENST00000558967 312 ntTSL 5 BASIC5.66□□□□□ -1.5
COL6A2P12110 NPM1P47-201ENST00000560843 856 ntBASIC5.66□□□□□ -1.5
COL6A2P12110 ARPP19-205ENST00000563566 568 ntTSL 4 BASIC5.66□□□□□ -1.5
COL6A2P12110 AC096996.1-201ENST00000563813 325 ntBASIC5.66□□□□□ -1.5
COL6A2P12110 AC087501.3-201ENST00000576477 513 ntTSL 5 BASIC5.66□□□□□ -1.5
COL6A2P12110 AC002546.2-201ENST00000585537 584 ntTSL 3 BASIC5.66□□□□□ -1.5
COL6A2P12110 AP001029.2-202ENST00000588197 739 ntTSL 3 BASIC5.66□□□□□ -1.5
COL6A2P12110 ELOCP28-201ENST00000590044 317 ntBASIC5.66□□□□□ -1.5
COL6A2P12110 AC138035.1-202ENST00000604669 683 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
COL6A2P12110 AL139124.1-201ENST00000609123 421 ntBASIC5.66□□□□□ -1.5
COL6A2P12110 HOTAIRM1_2.1-201ENST00000616712 215 ntBASIC5.66□□□□□ -1.5
COL6A2P12110 AC243756.2-201ENST00000618406 463 ntBASIC5.66□□□□□ -1.5
COL6A2P12110 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC5.66□□□□□ -1.5
COL6A2P12110 LINC01955-201ENST00000626392 792 ntTSL 5 BASIC5.66□□□□□ -1.5
COL6A2P12110 ADGRF5-201ENST00000265417 5668 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
COL6A2P12110 RAP1GDS1-202ENST00000339360 2092 ntAPPRIS ALT1 TSL 1 (best) BASIC5.66□□□□□ -1.5
COL6A2P12110 RYR3-209ENST00000634418 15078 ntAPPRIS ALT2 TSL 5 BASIC5.66□□□□□ -1.5
COL6A2P12110 RLIMP2-201ENST00000427891 1563 ntBASIC5.66□□□□□ -1.5
COL6A2P12110 AF287957.1-201ENST00000607368 1595 ntBASIC5.66□□□□□ -1.5
COL6A2P12110 RFFL-202ENST00000394597 4227 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
COL6A2P12110 CTAGE5-219ENST00000640607 4239 ntAPPRIS P5 TSL 1 (best) BASIC5.66□□□□□ -1.5
COL6A2P12110 MOCS2-203ENST00000450852 1337 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
COL6A2P12110 PIAS2-204ENST00000585916 11075 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
COL6A2P12110 RPGRIP1L-212ENST00000621565 6038 ntAPPRIS ALT1 TSL 1 (best) BASIC5.66□□□□□ -1.5
COL6A2P12110 RBM41-201ENST00000372479 1662 ntAPPRIS P3 TSL 1 (best) BASIC5.66□□□□□ -1.5
COL6A2P12110 CYP1D1P-201ENST00000416662 1433 ntBASIC5.65□□□□□ -1.5
COL6A2P12110 SLC4A10-202ENST00000375514 5710 ntAPPRIS ALT1 TSL 2 BASIC5.65□□□□□ -1.5
COL6A2P12110 AC119744.1-201ENST00000454746 1715 ntBASIC5.65□□□□□ -1.5
COL6A2P12110 ZMAT1-201ENST00000372782 3185 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
COL6A2P12110 ATF2-212ENST00000426833 4132 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
COL6A2P12110 ATP1B4-201ENST00000218008 3868 ntAPPRIS ALT1 TSL 1 (best) BASIC5.65□□□□□ -1.5
COL6A2P12110 SAGE1-203ENST00000537770 1824 ntAPPRIS ALT2 TSL 5 BASIC5.65□□□□□ -1.5
COL6A2P12110 RANBP3L-204ENST00000515759 1532 ntTSL 2 BASIC5.65□□□□□ -1.5
COL6A2P12110 AL512646.1-201ENST00000269395 1077 ntBASIC5.65□□□□□ -1.5
COL6A2P12110 OR1L3-201ENST00000304820 1118 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
COL6A2P12110 AL353751.1-201ENST00000354541 495 ntTSL 3 BASIC5.65□□□□□ -1.5
COL6A2P12110 OR1A2-201ENST00000381951 930 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
COL6A2P12110 AC117402.1-202ENST00000383686 820 ntTSL 2 BASIC5.65□□□□□ -1.5
COL6A2P12110 TRBV23-1-201ENST00000390396 347 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
COL6A2P12110 TRAV8-7-201ENST00000390456 341 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
COL6A2P12110 AC005042.1-201ENST00000393397 800 ntBASIC5.65□□□□□ -1.5
COL6A2P12110 RN7SKP86-201ENST00000410454 332 ntBASIC5.65□□□□□ -1.5
COL6A2P12110 RN7SKP29-201ENST00000410957 272 ntBASIC5.65□□□□□ -1.5
COL6A2P12110 RNU2-6P-201ENST00000411404 190 ntBASIC5.65□□□□□ -1.5
COL6A2P12110 AC004014.1-201ENST00000413406 538 ntTSL 4 BASIC5.65□□□□□ -1.5
COL6A2P12110 AL024509.3-201ENST00000413898 745 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
COL6A2P12110 AL354766.2-201ENST00000414085 423 ntTSL 2 BASIC5.65□□□□□ -1.5
COL6A2P12110 BX284656.2-201ENST00000414483 498 ntTSL 2 BASIC5.65□□□□□ -1.5
COL6A2P12110 AL121878.1-201ENST00000418638 859 ntBASIC5.65□□□□□ -1.5
COL6A2P12110 AC093698.1-201ENST00000423843 571 ntBASIC5.65□□□□□ -1.5
COL6A2P12110 LINC01690-201ENST00000424837 576 ntTSL 2 BASIC5.65□□□□□ -1.5
COL6A2P12110 AL159174.1-202ENST00000425588 442 ntTSL 3 BASIC5.65□□□□□ -1.5
COL6A2P12110 ISCA1P1-201ENST00000426679 387 ntBASIC5.65□□□□□ -1.5
COL6A2P12110 ZEB2-AS1-203ENST00000428623 436 ntTSL 2 BASIC5.65□□□□□ -1.5
COL6A2P12110 AC074011.1-201ENST00000431376 581 ntTSL 4 BASIC5.65□□□□□ -1.5
COL6A2P12110 MTND3P21-201ENST00000433774 331 ntBASIC5.65□□□□□ -1.5
COL6A2P12110 SPINK8-201ENST00000434006 444 ntAPPRIS P1 TSL 3 BASIC5.65□□□□□ -1.5
COL6A2P12110 LINC02528-202ENST00000434437 535 ntTSL 2 BASIC5.65□□□□□ -1.5
COL6A2P12110 AC092162.2-201ENST00000438143 532 ntTSL 4 BASIC5.65□□□□□ -1.5
COL6A2P12110 PRR16-203ENST00000446965 1152 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
COL6A2P12110 AC118758.1-202ENST00000454719 225 ntBASIC5.65□□□□□ -1.5
COL6A2P12110 RPL18AP17-201ENST00000455326 198 ntBASIC5.65□□□□□ -1.5
COL6A2P12110 AC004692.2-201ENST00000457315 355 ntTSL 3 BASIC5.65□□□□□ -1.5
COL6A2P12110 OR9M1P-201ENST00000459641 921 ntBASIC5.65□□□□□ -1.5
COL6A2P12110 AC026353.1-201ENST00000470523 558 ntTSL 2 BASIC5.65□□□□□ -1.5
COL6A2P12110 AL122020.1-201ENST00000472287 459 ntBASIC5.65□□□□□ -1.5
COL6A2P12110 DUTP1-201ENST00000493631 470 ntBASIC5.65□□□□□ -1.5
COL6A2P12110 AC138853.1-201ENST00000503549 823 ntBASIC5.65□□□□□ -1.5
COL6A2P12110 AC116634.1-201ENST00000506926 447 ntTSL 5 BASIC5.65□□□□□ -1.5
COL6A2P12110 LINC02223-202ENST00000511596 578 ntTSL 5 BASIC5.65□□□□□ -1.5
COL6A2P12110 RPL7L1P13-201ENST00000511702 739 ntBASIC5.65□□□□□ -1.5
COL6A2P12110 MYLK-AS2-202ENST00000515464 754 ntTSL 2 BASIC5.65□□□□□ -1.5
COL6A2P12110 RNY4P37-201ENST00000516225 96 ntBASIC5.65□□□□□ -1.5
COL6A2P12110 SCARNA18.1-201ENST00000516330 83 ntBASIC5.65□□□□□ -1.5
COL6A2P12110 FTH1P11-201ENST00000517577 551 ntBASIC5.65□□□□□ -1.5
COL6A2P12110 CR383656.6-201ENST00000550518 394 ntBASIC5.65□□□□□ -1.5
COL6A2P12110 AC110023.1-201ENST00000554318 457 ntTSL 3 BASIC5.65□□□□□ -1.5
COL6A2P12110 AL359219.2-201ENST00000555184 348 ntBASIC5.65□□□□□ -1.5
COL6A2P12110 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC5.65□□□□□ -1.5
COL6A2P12110 AC009063.1-201ENST00000563342 702 ntBASIC5.65□□□□□ -1.5
COL6A2P12110 OR1E3-201ENST00000575608 948 ntBASIC5.65□□□□□ -1.5
COL6A2P12110 MIR4528-201ENST00000577763 90 ntBASIC5.65□□□□□ -1.5
COL6A2P12110 MIR3154-201ENST00000577829 84 ntBASIC5.65□□□□□ -1.5
COL6A2P12110 MIR4776-2-201ENST00000580204 80 ntBASIC5.65□□□□□ -1.5
COL6A2P12110 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC5.65□□□□□ -1.5
COL6A2P12110 AP001004.1-201ENST00000582468 324 ntBASIC5.65□□□□□ -1.5
COL6A2P12110 AC083760.1-201ENST00000589621 670 ntBASIC5.65□□□□□ -1.5
COL6A2P12110 AC010271.1-201ENST00000599050 558 ntTSL 4 BASIC5.65□□□□□ -1.5
COL6A2P12110 BNIP3P30-201ENST00000601184 574 ntBASIC5.65□□□□□ -1.5
COL6A2P12110 AC024075.3-201ENST00000601687 453 ntTSL 5 BASIC5.65□□□□□ -1.5
COL6A2P12110 AC006363.1-201ENST00000603806 463 ntBASIC5.65□□□□□ -1.5
COL6A2P12110 RNU6-88P-201ENST00000606801 100 ntBASIC5.65□□□□□ -1.5
COL6A2P12110 AC092266.1-201ENST00000610958 165 ntBASIC5.65□□□□□ -1.5
COL6A2P12110 MIR6721-201ENST00000617181 87 ntBASIC5.65□□□□□ -1.5
COL6A2P12110 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC5.65□□□□□ -1.5
COL6A2P12110 MIR6806-201ENST00000622141 64 ntBASIC5.65□□□□□ -1.5
COL6A2P12110 AP000648.2-201ENST00000624182 404 ntBASIC5.65□□□□□ -1.5
COL6A2P12110 AC120349.2-201ENST00000625002 298 ntBASIC5.65□□□□□ -1.5
COL6A2P12110 NEK3-211ENST00000629912 141 ntTSL 5 BASIC5.65□□□□□ -1.5
COL6A2P12110 AL592430.2-201ENST00000633779 486 ntTSL 5 BASIC5.65□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 140 ms