Protein–RNA interactions for Protein: P12107

COL11A1, Collagen alpha-1(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1P12107 C2CD6-204ENST00000450242 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.48□□□□□ -1.69
COL11A1P12107 RSF1-204ENST00000480887 5318 ntAPPRIS ALT2 TSL 1 (best) BASIC4.48□□□□□ -1.69
COL11A1P12107 MLH3-212ENST00000556740 4491 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
COL11A1P12107 PCDH15-206ENST00000373965 9237 ntAPPRIS ALT2 TSL 5 BASIC4.48□□□□□ -1.69
COL11A1P12107 SRRM1-203ENST00000447431 3691 ntAPPRIS ALT2 TSL 5 BASIC4.48□□□□□ -1.69
COL11A1P12107 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC4.48□□□□□ -1.69
COL11A1P12107 CTXN2-201ENST00000417307 2828 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
COL11A1P12107 FMO2-201ENST00000209929 3851 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
COL11A1P12107 AC032011.1-201ENST00000611703 1549 ntBASIC4.48□□□□□ -1.69
COL11A1P12107 SLC10A2-201ENST00000245312 3779 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
COL11A1P12107 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
COL11A1P12107 RNA5SP51-201ENST00000364750 119 ntBASIC4.48□□□□□ -1.69
COL11A1P12107 AL139039.2-201ENST00000407436 479 ntBASIC4.48□□□□□ -1.69
COL11A1P12107 HIGD1AP4-201ENST00000430194 280 ntBASIC4.48□□□□□ -1.69
COL11A1P12107 ARL4AP4-201ENST00000434170 518 ntBASIC4.48□□□□□ -1.69
COL11A1P12107 CD200R1-205ENST00000490004 778 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
COL11A1P12107 LINC00644-201ENST00000555156 295 ntTSL 2 BASIC4.48□□□□□ -1.69
COL11A1P12107 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC4.48□□□□□ -1.69
COL11A1P12107 AC127502.1-204ENST00000564861 618 ntTSL 3 BASIC4.48□□□□□ -1.69
COL11A1P12107 AC006363.1-201ENST00000603806 463 ntBASIC4.48□□□□□ -1.69
COL11A1P12107 AC107419.1-202ENST00000608735 1081 ntTSL 3 BASIC4.48□□□□□ -1.69
COL11A1P12107 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC4.48□□□□□ -1.69
COL11A1P12107 PPP1R9A-207ENST00000433881 9928 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
COL11A1P12107 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
COL11A1P12107 AC019197.1-201ENST00000638199 3611 ntTSL 5 BASIC4.48□□□□□ -1.69
COL11A1P12107 GRID2-208ENST00000611049 4844 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
COL11A1P12107 LINC02426-201ENST00000550506 1372 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
COL11A1P12107 RGS1-201ENST00000367459 1405 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
COL11A1P12107 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC4.47□□□□□ -1.69
COL11A1P12107 DEPDC1-202ENST00000456315 5331 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
COL11A1P12107 LPAR4-205ENST00000614823 2155 ntAPPRIS P1 TSL 4 BASIC4.47□□□□□ -1.69
COL11A1P12107 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
COL11A1P12107 SLAMF6-201ENST00000368055 730 ntTSL 2 BASIC4.47□□□□□ -1.69
COL11A1P12107 TCEA1P4-201ENST00000415066 844 ntBASIC4.47□□□□□ -1.69
COL11A1P12107 CYCSP53-201ENST00000455540 265 ntBASIC4.47□□□□□ -1.69
COL11A1P12107 AP003472.1-201ENST00000519844 644 ntTSL 3 BASIC4.47□□□□□ -1.69
COL11A1P12107 AC073530.1-201ENST00000535917 775 ntTSL 5 BASIC4.47□□□□□ -1.69
COL11A1P12107 AC007599.1-201ENST00000568688 1174 ntBASIC4.47□□□□□ -1.69
COL11A1P12107 LINC02520-201ENST00000570443 537 ntTSL 4 BASIC4.47□□□□□ -1.69
COL11A1P12107 PCA3_2.1-201ENST00000612507 409 ntBASIC4.47□□□□□ -1.69
COL11A1P12107 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
COL11A1P12107 RLIM-201ENST00000332687 8317 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
COL11A1P12107 LINC01189-201ENST00000428440 3321 ntTSL 2 BASIC4.47□□□□□ -1.69
COL11A1P12107 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
COL11A1P12107 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC4.47□□□□□ -1.69
COL11A1P12107 OR10A6-204ENST00000642108 6104 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
COL11A1P12107 SCN1A-210ENST00000635776 10107 ntTSL 5 BASIC4.47□□□□□ -1.69
COL11A1P12107 RPGRIP1L-201ENST00000262135 8195 ntAPPRIS P3 TSL 5 BASIC4.47□□□□□ -1.69
COL11A1P12107 FTX-210ENST00000603037 8347 ntTSL 5 BASIC4.47□□□□□ -1.69
COL11A1P12107 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
COL11A1P12107 PCDH15-217ENST00000414778 9234 ntAPPRIS ALT2 TSL 5 BASIC4.47□□□□□ -1.69
COL11A1P12107 PCDH15-227ENST00000614895 9249 ntAPPRIS ALT2 TSL 5 BASIC4.47□□□□□ -1.69
COL11A1P12107 RPS6KA5-207ENST00000614987 26795 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
COL11A1P12107 SKP1-202ENST00000353411 9474 ntAPPRIS P4 TSL 1 (best) BASIC4.46□□□□□ -1.69
COL11A1P12107 Y_RNA.333-201ENST00000365274 102 ntBASIC4.46□□□□□ -1.69
COL11A1P12107 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC4.46□□□□□ -1.69
COL11A1P12107 TAS2R19-201ENST00000390673 1002 ntAPPRIS P1 BASIC4.46□□□□□ -1.69
COL11A1P12107 CDKN3-203ENST00000395577 637 ntTSL 5 BASIC4.46□□□□□ -1.69
COL11A1P12107 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC4.46□□□□□ -1.69
COL11A1P12107 AL449983.1-201ENST00000430640 414 ntTSL 2 BASIC4.46□□□□□ -1.69
COL11A1P12107 AL360089.1-201ENST00000442260 436 ntTSL 5 BASIC4.46□□□□□ -1.69
COL11A1P12107 AC104978.1-201ENST00000449387 391 ntBASIC4.46□□□□□ -1.69
COL11A1P12107 RPL23AP12-201ENST00000467573 473 ntBASIC4.46□□□□□ -1.69
COL11A1P12107 C1GALT1C1L-201ENST00000475092 1172 ntAPPRIS P1 BASIC4.46□□□□□ -1.69
COL11A1P12107 AC008011.1-201ENST00000545989 227 ntBASIC4.46□□□□□ -1.69
COL11A1P12107 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC4.46□□□□□ -1.69
COL11A1P12107 AC007066.2-202ENST00000566531 914 ntBASIC4.46□□□□□ -1.69
COL11A1P12107 AL137849.1-201ENST00000604767 169 ntBASIC4.46□□□□□ -1.69
COL11A1P12107 GHR-211ENST00000618088 4491 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.7
COL11A1P12107 DCN-201ENST00000052754 7156 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
COL11A1P12107 AC125336.1-201ENST00000508893 2827 ntBASIC4.46□□□□□ -1.7
COL11A1P12107 NOX4-205ENST00000424319 4184 ntTSL 5 BASIC4.46□□□□□ -1.7
COL11A1P12107 STARD9-201ENST00000290607 15567 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.7
COL11A1P12107 ZNF705E-201ENST00000525199 3442 ntAPPRIS P1 TSL 2 BASIC4.46□□□□□ -1.7
COL11A1P12107 ZNF568-214ENST00000616085 3542 ntTSL 5 BASIC4.46□□□□□ -1.7
COL11A1P12107 IL6-203ENST00000401651 539 ntTSL 2 BASIC4.46□□□□□ -1.7
COL11A1P12107 AC021035.1-201ENST00000421597 427 ntTSL 3 BASIC4.46□□□□□ -1.7
COL11A1P12107 LINC01445-201ENST00000426205 812 ntTSL 3 BASIC4.46□□□□□ -1.7
COL11A1P12107 AL031429.1-201ENST00000426775 749 ntTSL 2 BASIC4.46□□□□□ -1.7
COL11A1P12107 AL353681.1-201ENST00000435828 731 ntTSL 3 BASIC4.46□□□□□ -1.7
COL11A1P12107 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC4.46□□□□□ -1.7
COL11A1P12107 DARS-AS1-206ENST00000446492 488 ntTSL 3 BASIC4.46□□□□□ -1.7
COL11A1P12107 AC005008.1-201ENST00000456151 612 ntBASIC4.46□□□□□ -1.7
COL11A1P12107 LINC01192-207ENST00000492553 836 ntTSL 5 BASIC4.46□□□□□ -1.7
COL11A1P12107 UBE2CP3-201ENST00000502715 450 ntBASIC4.46□□□□□ -1.7
COL11A1P12107 TBCA-203ENST00000517679 545 ntTSL 3 BASIC4.46□□□□□ -1.7
COL11A1P12107 AC099805.1-203ENST00000518177 773 ntTSL 2 BASIC4.46□□□□□ -1.7
COL11A1P12107 SOD1P3-201ENST00000518682 454 ntBASIC4.46□□□□□ -1.7
COL11A1P12107 MFAP5-211ENST00000540087 492 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
COL11A1P12107 LINC00944-202ENST00000540684 888 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
COL11A1P12107 RN7SL339P-201ENST00000580597 296 ntBASIC4.46□□□□□ -1.7
COL11A1P12107 AC005899.4-201ENST00000581915 514 ntTSL 4 BASIC4.46□□□□□ -1.7
COL11A1P12107 TTN-AS1-243ENST00000591867 748 ntTSL 5 BASIC4.46□□□□□ -1.7
COL11A1P12107 AC063952.1-203ENST00000634410 658 ntBASIC4.46□□□□□ -1.7
COL11A1P12107 AC233968.1-201ENST00000611212 1300 ntBASIC4.46□□□□□ -1.7
COL11A1P12107 LINC00901-201ENST00000487512 1452 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
COL11A1P12107 CD69-201ENST00000228434 1676 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
COL11A1P12107 PDE1A-202ENST00000358139 2015 ntAPPRIS ALT2 TSL 2 BASIC4.46□□□□□ -1.7
COL11A1P12107 SLC7A11-201ENST00000280612 9645 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
COL11A1P12107 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC4.45□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 85.7 ms