Protein–RNA interactions for Protein: O95096

NKX2-2, Homeobox protein Nkx-2.2, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-2O95096 AC074386.1-201ENST00000476560 767 ntBASIC4.52□□□□□ -1.69
NKX2-2O95096 RPL7AP6-201ENST00000477943 801 ntBASIC4.52□□□□□ -1.69
NKX2-2O95096 RPL23AP44-201ENST00000482216 473 ntBASIC4.52□□□□□ -1.69
NKX2-2O95096 AC126121.1-201ENST00000482313 553 ntBASIC4.52□□□□□ -1.69
NKX2-2O95096 MTCO3P35-201ENST00000485582 781 ntBASIC4.52□□□□□ -1.69
NKX2-2O95096 AC016885.1-201ENST00000517796 532 ntTSL 4 BASIC4.52□□□□□ -1.69
NKX2-2O95096 AC099520.1-208ENST00000518276 472 ntTSL 3 BASIC4.52□□□□□ -1.69
NKX2-2O95096 AC018541.1-202ENST00000518687 584 ntTSL 4 BASIC4.52□□□□□ -1.69
NKX2-2O95096 AC117834.1-202ENST00000521203 561 ntTSL 4 BASIC4.52□□□□□ -1.69
NKX2-2O95096 HIGD1AP6-201ENST00000521833 279 ntBASIC4.52□□□□□ -1.69
NKX2-2O95096 AF279873.1-201ENST00000523393 313 ntBASIC4.52□□□□□ -1.69
NKX2-2O95096 AC023442.2-201ENST00000526455 270 ntTSL 3 BASIC4.52□□□□□ -1.69
NKX2-2O95096 OR4A2P-201ENST00000527276 913 ntBASIC4.52□□□□□ -1.69
NKX2-2O95096 RGS5-219ENST00000528019 512 ntTSL 4 BASIC4.52□□□□□ -1.69
NKX2-2O95096 PIH1D2-206ENST00000528775 1025 ntTSL 5 BASIC4.52□□□□□ -1.69
NKX2-2O95096 RRAS2-205ENST00000529237 1278 ntTSL 2 BASIC4.52□□□□□ -1.69
NKX2-2O95096 IFNG-AS1-201ENST00000536914 494 ntTSL 5 BASIC4.52□□□□□ -1.69
NKX2-2O95096 AC092747.2-201ENST00000545069 983 ntBASIC4.52□□□□□ -1.69
NKX2-2O95096 LINC02329-201ENST00000554753 511 ntTSL 5 BASIC4.52□□□□□ -1.69
NKX2-2O95096 AC026462.4-202ENST00000564331 532 ntTSL 3 BASIC4.52□□□□□ -1.69
NKX2-2O95096 AC003009.1-201ENST00000571611 686 ntTSL 3 BASIC4.52□□□□□ -1.69
NKX2-2O95096 AC068112.1-201ENST00000580057 346 ntTSL 3 BASIC4.52□□□□□ -1.69
NKX2-2O95096 NF1P5-201ENST00000588287 448 ntBASIC4.52□□□□□ -1.69
NKX2-2O95096 AC005757.1-201ENST00000591432 472 ntTSL 4 BASIC4.52□□□□□ -1.69
NKX2-2O95096 AC004862.1-203ENST00000598433 1020 ntTSL 5 BASIC4.52□□□□□ -1.69
NKX2-2O95096 AC068790.7-201ENST00000602347 528 ntBASIC4.52□□□□□ -1.69
NKX2-2O95096 AC091488.1-201ENST00000604239 660 ntBASIC4.52□□□□□ -1.69
NKX2-2O95096 AC005392.3-201ENST00000607109 459 ntTSL 2 BASIC4.52□□□□□ -1.69
NKX2-2O95096 AC091905.4-201ENST00000623432 202 ntBASIC4.52□□□□□ -1.69
NKX2-2O95096 C8orf89-202ENST00000624510 658 ntAPPRIS P2 TSL 3 BASIC4.52□□□□□ -1.69
NKX2-2O95096 OR6C3-203ENST00000641740 1093 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
NKX2-2O95096 LINC02211-204ENST00000642024 1070 ntBASIC4.52□□□□□ -1.69
NKX2-2O95096 FAM35A-201ENST00000298784 3402 ntAPPRIS P1 TSL 2 BASIC4.52□□□□□ -1.69
NKX2-2O95096 AC099654.2-201ENST00000433031 1980 ntBASIC4.52□□□□□ -1.69
NKX2-2O95096 CFHR3-205ENST00000471440 1965 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
NKX2-2O95096 SSR1-202ENST00000397511 3248 ntTSL 5 BASIC4.52□□□□□ -1.69
NKX2-2O95096 FAM111A-201ENST00000361723 3592 ntAPPRIS P1 TSL 2 BASIC4.52□□□□□ -1.69
NKX2-2O95096 CCDC54-201ENST00000261058 1444 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
NKX2-2O95096 ZBTB21-201ENST00000310826 7449 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
NKX2-2O95096 CASC1-204ENST00000395990 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC4.52□□□□□ -1.69
NKX2-2O95096 PDE4B-201ENST00000329654 3998 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
NKX2-2O95096 AC000374.1-201ENST00000434698 1745 ntBASIC4.52□□□□□ -1.69
NKX2-2O95096 IPCEF1-203ENST00000422970 3267 ntAPPRIS ALT2 TSL 1 (best) BASIC4.52□□□□□ -1.69
NKX2-2O95096 TAS2R20-201ENST00000538986 1381 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
NKX2-2O95096 RAD17-220ENST00000616683 3057 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
NKX2-2O95096 AC006484.1-201ENST00000435086 1884 ntBASIC4.52□□□□□ -1.69
NKX2-2O95096 SLC38A11-204ENST00000409662 1542 ntAPPRIS P2 TSL 1 (best) BASIC4.51□□□□□ -1.69
NKX2-2O95096 SCN3A-203ENST00000409101 6599 ntAPPRIS ALT1 TSL 1 (best) BASIC4.51□□□□□ -1.69
NKX2-2O95096 TET2-202ENST00000305737 9233 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
NKX2-2O95096 PRUNE2-204ENST00000376718 12584 ntAPPRIS P3 TSL 5 BASIC4.51□□□□□ -1.69
NKX2-2O95096 LANCL1-204ENST00000441020 4503 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
NKX2-2O95096 AL022393.1-201ENST00000625142 1677 ntBASIC4.51□□□□□ -1.69
NKX2-2O95096 DHX9P1-201ENST00000436565 3076 ntBASIC4.51□□□□□ -1.69
NKX2-2O95096 AP001267.1-201ENST00000531742 2074 ntTSL 2 BASIC4.51□□□□□ -1.69
NKX2-2O95096 COA1-201ENST00000223336 927 ntAPPRIS P3 TSL 2 BASIC4.51□□□□□ -1.69
NKX2-2O95096 STATH-201ENST00000246895 598 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
NKX2-2O95096 IKZF3-202ENST00000346243 1296 ntTSL 5 BASIC4.51□□□□□ -1.69
NKX2-2O95096 RNU6-707P-201ENST00000364647 95 ntBASIC4.51□□□□□ -1.69
NKX2-2O95096 POU2F1-202ENST00000367862 14038 ntAPPRIS ALT2 TSL 1 (best) BASIC4.51□□□□□ -1.69
NKX2-2O95096 SAMD13-202ENST00000370669 856 ntAPPRIS P1 TSL 3 BASIC4.51□□□□□ -1.69
NKX2-2O95096 AC087276.2-201ENST00000394183 183 ntTSL 5 BASIC4.51□□□□□ -1.69
NKX2-2O95096 AC005522.1-201ENST00000395416 346 ntBASIC4.51□□□□□ -1.69
NKX2-2O95096 DEFB113-201ENST00000398718 249 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
NKX2-2O95096 SPTLC1P2-201ENST00000407089 121 ntBASIC4.51□□□□□ -1.69
NKX2-2O95096 RNU6-272P-201ENST00000411028 104 ntBASIC4.51□□□□□ -1.69
NKX2-2O95096 AC007394.1-201ENST00000421941 531 ntBASIC4.51□□□□□ -1.69
NKX2-2O95096 EIF4HP2-201ENST00000424380 563 ntBASIC4.51□□□□□ -1.69
NKX2-2O95096 CKS1BP6-201ENST00000424932 240 ntBASIC4.51□□□□□ -1.69
NKX2-2O95096 OR2AH1P-201ENST00000425717 928 ntBASIC4.51□□□□□ -1.69
NKX2-2O95096 AL158073.1-201ENST00000426848 1104 ntBASIC4.51□□□□□ -1.69
NKX2-2O95096 ABCC13-201ENST00000429114 611 ntTSL 3 BASIC4.51□□□□□ -1.69
NKX2-2O95096 LINC01826-201ENST00000432894 584 ntTSL 4 BASIC4.51□□□□□ -1.69
NKX2-2O95096 AC009158.1-207ENST00000432973 394 ntTSL 5 BASIC4.51□□□□□ -1.69
NKX2-2O95096 NANOGP2-201ENST00000435391 727 ntBASIC4.51□□□□□ -1.69
NKX2-2O95096 GPC6-AS1-201ENST00000436329 698 ntTSL 5 BASIC4.51□□□□□ -1.69
NKX2-2O95096 AL445644.1-201ENST00000436524 751 ntTSL 2 BASIC4.51□□□□□ -1.69
NKX2-2O95096 LINC00376-201ENST00000439454 693 ntTSL 5 BASIC4.51□□□□□ -1.69
NKX2-2O95096 EEF1A1P39-201ENST00000440791 250 ntBASIC4.51□□□□□ -1.69
NKX2-2O95096 PRKACB-213ENST00000446538 1112 ntTSL 2 BASIC4.51□□□□□ -1.69
NKX2-2O95096 TMEM246-AS1-204ENST00000450109 538 ntTSL 3 BASIC4.51□□□□□ -1.69
NKX2-2O95096 AC004872.1-201ENST00000456062 469 ntTSL 3 BASIC4.51□□□□□ -1.69
NKX2-2O95096 AC018638.3-201ENST00000461273 132 ntBASIC4.51□□□□□ -1.69
NKX2-2O95096 RPL21P71-201ENST00000465598 459 ntBASIC4.51□□□□□ -1.69
NKX2-2O95096 AC090686.1-201ENST00000481577 749 ntBASIC4.51□□□□□ -1.69
NKX2-2O95096 AC069304.1-201ENST00000491593 704 ntBASIC4.51□□□□□ -1.69
NKX2-2O95096 RN7SL558P-201ENST00000497468 299 ntBASIC4.51□□□□□ -1.69
NKX2-2O95096 AL136537.1-202ENST00000501725 430 ntTSL 3 BASIC4.51□□□□□ -1.69
NKX2-2O95096 AC118282.1-201ENST00000506408 765 ntBASIC4.51□□□□□ -1.69
NKX2-2O95096 SEMA6A-AS2-201ENST00000508766 482 ntTSL 3 BASIC4.51□□□□□ -1.69
NKX2-2O95096 TCP11X3P-202ENST00000514289 1254 ntBASIC4.51□□□□□ -1.69
NKX2-2O95096 RNU6-709P-201ENST00000517257 104 ntBASIC4.51□□□□□ -1.69
NKX2-2O95096 AC068880.2-201ENST00000521016 362 ntTSL 5 BASIC4.51□□□□□ -1.69
NKX2-2O95096 AC090150.2-201ENST00000521869 815 ntTSL 3 BASIC4.51□□□□□ -1.69
NKX2-2O95096 AC104257.1-202ENST00000524275 884 ntTSL 3 BASIC4.51□□□□□ -1.69
NKX2-2O95096 VNN2-207ENST00000525289 900 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
NKX2-2O95096 NAV2-AS1-201ENST00000526642 660 ntTSL 3 BASIC4.51□□□□□ -1.69
NKX2-2O95096 AP003969.1-201ENST00000531846 400 ntTSL 2 BASIC4.51□□□□□ -1.69
NKX2-2O95096 AC073864.1-201ENST00000540161 562 ntTSL 4 BASIC4.51□□□□□ -1.69
NKX2-2O95096 AC244502.1-203ENST00000541008 576 ntTSL 4 BASIC4.51□□□□□ -1.69
NKX2-2O95096 AC011773.3-201ENST00000546501 589 ntTSL 3 BASIC4.51□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 107 ms