Protein–RNA interactions for Protein: Q9Y5P3

RAI2, Retinoic acid-induced protein 2, humanhuman

Predictions only

Length 530 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAI2Q9Y5P3 NOVA1-AS1-203ENST00000552101 468 ntTSL 3 BASIC4.9□□□□□ -1.63
RAI2Q9Y5P3 AC007424.1-205ENST00000552615 579 ntTSL 4 BASIC4.9□□□□□ -1.63
RAI2Q9Y5P3 AC090888.2-201ENST00000559765 1144 ntBASIC4.9□□□□□ -1.63
RAI2Q9Y5P3 AC009101.2-201ENST00000564293 456 ntTSL 3 BASIC4.9□□□□□ -1.63
RAI2Q9Y5P3 AC034105.4-201ENST00000568304 277 ntBASIC4.9□□□□□ -1.63
RAI2Q9Y5P3 AC016839.1-201ENST00000578162 867 ntBASIC4.9□□□□□ -1.63
RAI2Q9Y5P3 AC091042.1-201ENST00000579213 173 ntBASIC4.9□□□□□ -1.63
RAI2Q9Y5P3 MIR7515HG-226ENST00000588330 1055 ntTSL 5 BASIC4.9□□□□□ -1.63
RAI2Q9Y5P3 AC242426.3-203ENST00000606757 712 ntTSL 3 BASIC4.9□□□□□ -1.63
RAI2Q9Y5P3 AL158062.1-201ENST00000619632 745 ntBASIC4.9□□□□□ -1.63
RAI2Q9Y5P3 AC011330.2-201ENST00000621680 635 ntBASIC4.9□□□□□ -1.63
RAI2Q9Y5P3 DLG2-AS1_1.1-201ENST00000622319 213 ntBASIC4.9□□□□□ -1.63
RAI2Q9Y5P3 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.63
RAI2Q9Y5P3 MTERF1-203ENST00000419292 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC4.9□□□□□ -1.63
RAI2Q9Y5P3 LINC01222-201ENST00000427439 1785 ntTSL 2 BASIC4.9□□□□□ -1.63
RAI2Q9Y5P3 USP26-203ENST00000511190 3665 ntAPPRIS P1 TSL 2 BASIC4.9□□□□□ -1.63
RAI2Q9Y5P3 AC234781.1-202ENST00000412436 1329 ntTSL 5 BASIC4.9□□□□□ -1.63
RAI2Q9Y5P3 AL122126.1-201ENST00000546905 1318 ntBASIC4.9□□□□□ -1.63
RAI2Q9Y5P3 ZNF33A-201ENST00000307441 6196 ntAPPRIS ALT2 TSL 4 BASIC4.9□□□□□ -1.63
RAI2Q9Y5P3 CDC23-202ENST00000394886 3155 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
RAI2Q9Y5P3 MTCO1P18-201ENST00000455518 1419 ntBASIC4.89□□□□□ -1.63
RAI2Q9Y5P3 CNTN5-201ENST00000279463 5925 ntTSL 5 BASIC4.89□□□□□ -1.63
RAI2Q9Y5P3 LIPJ-201ENST00000371939 1484 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
RAI2Q9Y5P3 AC011503.2-201ENST00000594230 1500 ntBASIC4.89□□□□□ -1.63
RAI2Q9Y5P3 OR5AN1-201ENST00000313940 1037 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
RAI2Q9Y5P3 GSTA1-201ENST00000334575 1019 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
RAI2Q9Y5P3 RNA5SP515-201ENST00000364570 118 ntBASIC4.89□□□□□ -1.63
RAI2Q9Y5P3 POU2F1-202ENST00000367862 14038 ntAPPRIS ALT2 TSL 1 (best) BASIC4.89□□□□□ -1.63
RAI2Q9Y5P3 OR51I1-201ENST00000380211 945 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
RAI2Q9Y5P3 RNU4-31P-201ENST00000384211 141 ntBASIC4.89□□□□□ -1.63
RAI2Q9Y5P3 RPS3AP23-201ENST00000401762 784 ntBASIC4.89□□□□□ -1.63
RAI2Q9Y5P3 AL590806.1-201ENST00000415818 853 ntBASIC4.89□□□□□ -1.63
RAI2Q9Y5P3 LANCL1-AS1-202ENST00000420418 476 ntTSL 3 BASIC4.89□□□□□ -1.63
RAI2Q9Y5P3 USP9YP21-201ENST00000420603 432 ntBASIC4.89□□□□□ -1.63
RAI2Q9Y5P3 NAALADL2-AS2-201ENST00000424690 1038 ntTSL 5 BASIC4.89□□□□□ -1.63
RAI2Q9Y5P3 LINC00400-201ENST00000425609 547 ntTSL 3 BASIC4.89□□□□□ -1.63
RAI2Q9Y5P3 HSPE1P16-201ENST00000426640 348 ntBASIC4.89□□□□□ -1.63
RAI2Q9Y5P3 AC007559.1-201ENST00000428736 355 ntBASIC4.89□□□□□ -1.63
RAI2Q9Y5P3 ETF1P3-201ENST00000430422 1160 ntBASIC4.89□□□□□ -1.63
RAI2Q9Y5P3 AL139002.1-201ENST00000435281 902 ntTSL 5 BASIC4.89□□□□□ -1.63
RAI2Q9Y5P3 LINC01423-202ENST00000436845 423 ntTSL 2 BASIC4.89□□□□□ -1.63
RAI2Q9Y5P3 AP000146.1-202ENST00000441666 441 ntTSL 3 BASIC4.89□□□□□ -1.63
RAI2Q9Y5P3 AC114814.3-201ENST00000449362 663 ntTSL 2 BASIC4.89□□□□□ -1.63
RAI2Q9Y5P3 AC012355.1-201ENST00000450290 769 ntTSL 3 BASIC4.89□□□□□ -1.63
RAI2Q9Y5P3 TPTE2P6-203ENST00000450973 649 ntTSL 5 BASIC4.89□□□□□ -1.63
RAI2Q9Y5P3 AC010733.1-201ENST00000451515 401 ntBASIC4.89□□□□□ -1.63
RAI2Q9Y5P3 CCNB1IP1P3-201ENST00000454702 829 ntBASIC4.89□□□□□ -1.63
RAI2Q9Y5P3 RPL7P32-201ENST00000457119 744 ntBASIC4.89□□□□□ -1.63
RAI2Q9Y5P3 AC021205.1-201ENST00000468797 348 ntBASIC4.89□□□□□ -1.63
RAI2Q9Y5P3 MTCO3P35-201ENST00000485582 781 ntBASIC4.89□□□□□ -1.63
RAI2Q9Y5P3 CREM-238ENST00000488741 651 ntTSL 2 BASIC4.89□□□□□ -1.63
RAI2Q9Y5P3 CCDC39-AS1-201ENST00000495357 283 ntTSL 3 BASIC4.89□□□□□ -1.63
RAI2Q9Y5P3 RN7SL558P-201ENST00000497468 299 ntBASIC4.89□□□□□ -1.63
RAI2Q9Y5P3 AC079349.1-201ENST00000509096 589 ntTSL 2 BASIC4.89□□□□□ -1.63
RAI2Q9Y5P3 MEF2C-AS1-208ENST00000512585 741 ntTSL 5 BASIC4.89□□□□□ -1.63
RAI2Q9Y5P3 RNU6-1028P-201ENST00000517164 93 ntBASIC4.89□□□□□ -1.63
RAI2Q9Y5P3 LINC02143-201ENST00000519929 520 ntTSL 3 BASIC4.89□□□□□ -1.63
RAI2Q9Y5P3 AP001636.2-201ENST00000525517 696 ntBASIC4.89□□□□□ -1.63
RAI2Q9Y5P3 OR4A2P-201ENST00000527276 913 ntBASIC4.89□□□□□ -1.63
RAI2Q9Y5P3 LINC02553-201ENST00000529088 734 ntTSL 5 BASIC4.89□□□□□ -1.63
RAI2Q9Y5P3 AC244502.1-203ENST00000541008 576 ntTSL 4 BASIC4.89□□□□□ -1.63
RAI2Q9Y5P3 SNHG14-221ENST00000554726 1116 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
RAI2Q9Y5P3 AL109766.1-201ENST00000555080 552 ntBASIC4.89□□□□□ -1.63
RAI2Q9Y5P3 AL162872.1-201ENST00000557709 448 ntTSL 3 BASIC4.89□□□□□ -1.63
RAI2Q9Y5P3 AC015660.2-201ENST00000561362 323 ntTSL 3 BASIC4.89□□□□□ -1.63
RAI2Q9Y5P3 MIR4277-201ENST00000578298 84 ntBASIC4.89□□□□□ -1.63
RAI2Q9Y5P3 OR7A5-202ENST00000594432 1029 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
RAI2Q9Y5P3 AP002906.1-201ENST00000603405 233 ntBASIC4.89□□□□□ -1.63
RAI2Q9Y5P3 DUXAP3-201ENST00000603616 594 ntBASIC4.89□□□□□ -1.63
RAI2Q9Y5P3 AL391358.1-201ENST00000605342 190 ntBASIC4.89□□□□□ -1.63
RAI2Q9Y5P3 AL121932.1-201ENST00000605542 214 ntBASIC4.89□□□□□ -1.63
RAI2Q9Y5P3 FAM26D-205ENST00000628083 1117 ntTSL 2 BASIC4.89□□□□□ -1.63
RAI2Q9Y5P3 AC010266.2-201ENST00000564741 3255 ntBASIC4.89□□□□□ -1.63
RAI2Q9Y5P3 MYBPC1-202ENST00000361685 3871 ntAPPRIS ALT2 TSL 1 (best) BASIC4.89□□□□□ -1.63
RAI2Q9Y5P3 AL355578.1-201ENST00000607405 1328 ntBASIC4.89□□□□□ -1.63
RAI2Q9Y5P3 EDA2R-202ENST00000374719 3418 ntAPPRIS P3 TSL 1 (best) BASIC4.89□□□□□ -1.63
RAI2Q9Y5P3 USP28-213ENST00000544967 3498 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
RAI2Q9Y5P3 R3HDM1-204ENST00000410054 4442 ntTSL 2 BASIC4.89□□□□□ -1.63
RAI2Q9Y5P3 AP000542.2-201ENST00000623199 6179 ntBASIC4.89□□□□□ -1.63
RAI2Q9Y5P3 NBPF10-202ENST00000617010 11630 ntTSL 5 BASIC4.89□□□□□ -1.63
RAI2Q9Y5P3 SLC4A10-203ENST00000415876 5578 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
RAI2Q9Y5P3 AC008505.1-203ENST00000637345 1766 ntTSL 5 BASIC4.88□□□□□ -1.63
RAI2Q9Y5P3 VCAM1-203ENST00000370115 2475 ntTSL 5 BASIC4.88□□□□□ -1.63
RAI2Q9Y5P3 LMNTD1-202ENST00000413632 1520 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
RAI2Q9Y5P3 IL1R1-204ENST00000409929 1858 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
RAI2Q9Y5P3 CDH17-201ENST00000027335 3693 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
RAI2Q9Y5P3 MOXD1-201ENST00000336749 2950 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
RAI2Q9Y5P3 RASGRP1-209ENST00000559830 1910 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
RAI2Q9Y5P3 ZNF849P-201ENST00000594711 1566 ntBASIC4.88□□□□□ -1.63
RAI2Q9Y5P3 PALMD-203ENST00000605497 1942 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
RAI2Q9Y5P3 INTS6-220ENST00000497989 3022 ntTSL 2 BASIC4.88□□□□□ -1.63
RAI2Q9Y5P3 AC118758.3-201ENST00000624628 24137 ntTSL 5 BASIC4.88□□□□□ -1.63
RAI2Q9Y5P3 IFNG-201ENST00000229135 1218 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
RAI2Q9Y5P3 RPL9-201ENST00000295955 750 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
RAI2Q9Y5P3 OR14C36-201ENST00000317861 939 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
RAI2Q9Y5P3 RNA5SP191-201ENST00000362585 102 ntBASIC4.88□□□□□ -1.63
RAI2Q9Y5P3 RNU1-64P-201ENST00000365443 163 ntBASIC4.88□□□□□ -1.63
RAI2Q9Y5P3 CD84-205ENST00000368051 965 ntAPPRIS ALT2 TSL 1 (best) BASIC4.88□□□□□ -1.63
RAI2Q9Y5P3 U3.30-201ENST00000391308 210 ntBASIC4.88□□□□□ -1.63
RAI2Q9Y5P3 CTSL3P-202ENST00000412179 788 ntBASIC4.88□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 71.8 ms