Protein–RNA interactions for Protein: Q9HCM3

KIAA1549, UPF0606 protein KIAA1549, humanhuman

Predictions only

Length 1,950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KIAA1549Q9HCM3 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC3.66□□□□□ -1.82
KIAA1549Q9HCM3 AL591441.1-201ENST00000618108 2247 ntTSL 2 BASIC3.65□□□□□ -1.82
KIAA1549Q9HCM3 OR6C2-201ENST00000322678 939 ntAPPRIS P1 BASIC3.65□□□□□ -1.82
KIAA1549Q9HCM3 C11orf74-201ENST00000334307 863 ntAPPRIS P3 TSL 1 (best) BASIC3.65□□□□□ -1.82
KIAA1549Q9HCM3 C11orf74-202ENST00000347206 633 ntAPPRIS ALT2 TSL 1 (best) BASIC3.65□□□□□ -1.82
KIAA1549Q9HCM3 RNA5SP52-201ENST00000362448 134 ntBASIC3.65□□□□□ -1.82
KIAA1549Q9HCM3 RNA5SP124-201ENST00000362739 110 ntBASIC3.65□□□□□ -1.82
KIAA1549Q9HCM3 RN7SKP247-201ENST00000411094 308 ntBASIC3.65□□□□□ -1.82
KIAA1549Q9HCM3 AC093159.1-201ENST00000416845 424 ntTSL 3 BASIC3.65□□□□□ -1.82
KIAA1549Q9HCM3 AL583785.1-201ENST00000428006 512 ntTSL 2 BASIC3.65□□□□□ -1.82
KIAA1549Q9HCM3 AP003774.2-202ENST00000449694 341 ntTSL 3 BASIC3.65□□□□□ -1.82
KIAA1549Q9HCM3 RPS6P2-201ENST00000454208 705 ntBASIC3.65□□□□□ -1.82
KIAA1549Q9HCM3 SUMO2P4-201ENST00000504193 276 ntBASIC3.65□□□□□ -1.82
KIAA1549Q9HCM3 HPRT1P2-201ENST00000505250 544 ntBASIC3.65□□□□□ -1.82
KIAA1549Q9HCM3 PLAC8-205ENST00000509973 489 ntTSL 1 (best) BASIC3.65□□□□□ -1.82
KIAA1549Q9HCM3 MTND4LP31-201ENST00000514859 294 ntBASIC3.65□□□□□ -1.82
KIAA1549Q9HCM3 RNA5SP179-201ENST00000517284 121 ntBASIC3.65□□□□□ -1.82
KIAA1549Q9HCM3 ZFHX4-207ENST00000521891 14019 ntAPPRIS P2 TSL 5 BASIC3.65□□□□□ -1.82
KIAA1549Q9HCM3 AL591424.2-201ENST00000617023 128 ntBASIC3.65□□□□□ -1.82
KIAA1549Q9HCM3 AC008785.1-201ENST00000624475 456 ntBASIC3.65□□□□□ -1.82
KIAA1549Q9HCM3 HCFC2P1-201ENST00000392864 1592 ntBASIC3.65□□□□□ -1.82
KIAA1549Q9HCM3 LINC01013-205ENST00000458028 1345 ntTSL 1 (best) BASIC3.65□□□□□ -1.82
KIAA1549Q9HCM3 AC027228.2-201ENST00000567141 2154 ntBASIC3.65□□□□□ -1.82
KIAA1549Q9HCM3 LPAR4-205ENST00000614823 2155 ntAPPRIS P1 TSL 4 BASIC3.65□□□□□ -1.82
KIAA1549Q9HCM3 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.82
KIAA1549Q9HCM3 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC3.65□□□□□ -1.82
KIAA1549Q9HCM3 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
KIAA1549Q9HCM3 RIMS2-201ENST00000262231 3854 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
KIAA1549Q9HCM3 PATE1-201ENST00000305738 1527 ntAPPRIS P2 TSL 1 (best) BASIC3.65□□□□□ -1.83
KIAA1549Q9HCM3 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC3.65□□□□□ -1.83
KIAA1549Q9HCM3 CLCA3P-202ENST00000466454 3412 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
KIAA1549Q9HCM3 ZNF700-202ENST00000482090 3113 ntAPPRIS ALT2 TSL 2 BASIC3.65□□□□□ -1.83
KIAA1549Q9HCM3 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC3.65□□□□□ -1.83
KIAA1549Q9HCM3 RNU4-44P-201ENST00000363050 141 ntBASIC3.65□□□□□ -1.83
KIAA1549Q9HCM3 RHOT1P2-201ENST00000366423 333 ntBASIC3.65□□□□□ -1.83
KIAA1549Q9HCM3 MIR23B-201ENST00000384832 97 ntBASIC3.65□□□□□ -1.83
KIAA1549Q9HCM3 ENSAP1-201ENST00000392855 326 ntBASIC3.65□□□□□ -1.83
KIAA1549Q9HCM3 RNU2-22P-201ENST00000411266 212 ntBASIC3.65□□□□□ -1.83
KIAA1549Q9HCM3 AL589642.2-201ENST00000413291 839 ntTSL 3 BASIC3.65□□□□□ -1.83
KIAA1549Q9HCM3 GOT2P5-201ENST00000433995 546 ntBASIC3.65□□□□□ -1.83
KIAA1549Q9HCM3 AL500522.2-201ENST00000448562 343 ntBASIC3.65□□□□□ -1.83
KIAA1549Q9HCM3 HCG17-214ENST00000453558 732 ntTSL 5 BASIC3.65□□□□□ -1.83
KIAA1549Q9HCM3 AC034236.1-201ENST00000469891 373 ntBASIC3.65□□□□□ -1.83
KIAA1549Q9HCM3 PLSCR5-203ENST00000492200 1058 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.83
KIAA1549Q9HCM3 LINC02506-201ENST00000513211 734 ntTSL 3 BASIC3.65□□□□□ -1.83
KIAA1549Q9HCM3 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC3.65□□□□□ -1.83
KIAA1549Q9HCM3 AC046130.2-201ENST00000537655 794 ntTSL 3 BASIC3.65□□□□□ -1.83
KIAA1549Q9HCM3 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC3.65□□□□□ -1.83
KIAA1549Q9HCM3 AC107982.3-201ENST00000584957 985 ntBASIC3.65□□□□□ -1.83
KIAA1549Q9HCM3 AL121772.2-201ENST00000614331 297 ntBASIC3.65□□□□□ -1.83
KIAA1549Q9HCM3 PDCD6IPP1-202ENST00000622242 1064 ntBASIC3.65□□□□□ -1.83
KIAA1549Q9HCM3 PCBP1-AS1-307ENST00000627050 912 ntTSL 5 BASIC3.65□□□□□ -1.83
KIAA1549Q9HCM3 AL596275.2-204ENST00000641628 552 ntBASIC3.65□□□□□ -1.83
KIAA1549Q9HCM3 AL596275.2-206ENST00000641957 626 ntBASIC3.65□□□□□ -1.83
KIAA1549Q9HCM3 LINC02458-201ENST00000500381 2941 ntTSL 2 BASIC3.65□□□□□ -1.83
KIAA1549Q9HCM3 SCN1A-210ENST00000635776 10107 ntTSL 5 BASIC3.65□□□□□ -1.83
KIAA1549Q9HCM3 FOXP2-226ENST00000635638 2598 ntAPPRIS ALT1 TSL 5 BASIC3.64□□□□□ -1.83
KIAA1549Q9HCM3 MAPK10-253ENST00000641010 4072 ntBASIC3.64□□□□□ -1.83
KIAA1549Q9HCM3 TAX1BP1-203ENST00000409980 2629 ntAPPRIS ALT2 TSL 5 BASIC3.64□□□□□ -1.83
KIAA1549Q9HCM3 PCDH11X-207ENST00000406881 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC3.64□□□□□ -1.83
KIAA1549Q9HCM3 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
KIAA1549Q9HCM3 PTPN13-201ENST00000316707 7546 ntAPPRIS ALT2 TSL 1 (best) BASIC3.64□□□□□ -1.83
KIAA1549Q9HCM3 OR10K1-203ENST00000641432 3775 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
KIAA1549Q9HCM3 MAPK10-353ENST00000641803 8483 ntAPPRIS P2 BASIC3.64□□□□□ -1.83
KIAA1549Q9HCM3 TRAV23DV6-201ENST00000390451 409 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
KIAA1549Q9HCM3 TRGV5P-201ENST00000419915 354 ntBASIC3.64□□□□□ -1.83
KIAA1549Q9HCM3 AL138759.1-201ENST00000432120 645 ntTSL 2 BASIC3.64□□□□□ -1.83
KIAA1549Q9HCM3 AL355601.1-201ENST00000444701 427 ntTSL 3 BASIC3.64□□□□□ -1.83
KIAA1549Q9HCM3 LINC00973-201ENST00000473756 962 ntTSL 2 BASIC3.64□□□□□ -1.83
KIAA1549Q9HCM3 AP002812.1-201ENST00000495378 474 ntBASIC3.64□□□□□ -1.83
KIAA1549Q9HCM3 OR10J4-201ENST00000504970 935 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
KIAA1549Q9HCM3 AC008572.1-201ENST00000507269 442 ntTSL 5 BASIC3.64□□□□□ -1.83
KIAA1549Q9HCM3 AC006499.6-201ENST00000511169 607 ntBASIC3.64□□□□□ -1.83
KIAA1549Q9HCM3 KLRC2-204ENST00000536833 771 ntTSL 5 BASIC3.64□□□□□ -1.83
KIAA1549Q9HCM3 AC073651.3-201ENST00000545999 417 ntTSL 3 BASIC3.64□□□□□ -1.83
KIAA1549Q9HCM3 FAM26D-205ENST00000628083 1117 ntTSL 2 BASIC3.64□□□□□ -1.83
KIAA1549Q9HCM3 FANCD2-202ENST00000383807 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC3.64□□□□□ -1.83
KIAA1549Q9HCM3 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC3.64□□□□□ -1.83
KIAA1549Q9HCM3 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
KIAA1549Q9HCM3 FMO2-201ENST00000209929 3851 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
KIAA1549Q9HCM3 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC3.64□□□□□ -1.83
KIAA1549Q9HCM3 SPEF2-216ENST00000637569 7350 ntAPPRIS ALT2 TSL 5 BASIC3.64□□□□□ -1.83
KIAA1549Q9HCM3 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
KIAA1549Q9HCM3 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
KIAA1549Q9HCM3 OR2AP1-202ENST00000641114 1548 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
KIAA1549Q9HCM3 OR5AQ1P-202ENST00000641257 1534 ntBASIC3.64□□□□□ -1.83
KIAA1549Q9HCM3 LDHAL6CP-202ENST00000550738 3224 ntBASIC3.64□□□□□ -1.83
KIAA1549Q9HCM3 RALGAPA1-204ENST00000553892 6271 ntTSL 5 BASIC3.64□□□□□ -1.83
KIAA1549Q9HCM3 MIR208A-201ENST00000362287 71 ntBASIC3.63□□□□□ -1.83
KIAA1549Q9HCM3 RNU6-628P-201ENST00000410675 107 ntBASIC3.63□□□□□ -1.83
KIAA1549Q9HCM3 RNU4-6P-201ENST00000410804 122 ntBASIC3.63□□□□□ -1.83
KIAA1549Q9HCM3 AC090505.2-201ENST00000427064 464 ntTSL 3 BASIC3.63□□□□□ -1.83
KIAA1549Q9HCM3 GCA-203ENST00000429691 824 ntTSL 3 BASIC3.63□□□□□ -1.83
KIAA1549Q9HCM3 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC3.63□□□□□ -1.83
KIAA1549Q9HCM3 DCUN1D1-204ENST00000469954 970 ntTSL 3 BASIC3.63□□□□□ -1.83
KIAA1549Q9HCM3 C1GALT1C1L-201ENST00000475092 1172 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
KIAA1549Q9HCM3 PPIAP15-201ENST00000479662 484 ntBASIC3.63□□□□□ -1.83
KIAA1549Q9HCM3 TRAPPC2P2-201ENST00000517589 409 ntBASIC3.63□□□□□ -1.83
KIAA1549Q9HCM3 AC073864.1-201ENST00000540161 562 ntTSL 4 BASIC3.63□□□□□ -1.83
KIAA1549Q9HCM3 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC3.63□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 87.2 ms