Protein–RNA interactions for Protein: Q9BZI7

UPF3B, Regulator of nonsense transcripts 3B, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3BQ9BZI7 AL132765.1-201ENST00000434165 553 ntBASIC4.99□□□□□ -1.61
UPF3BQ9BZI7 PTMAP3-201ENST00000447474 330 ntBASIC4.99□□□□□ -1.61
UPF3BQ9BZI7 AC115618.2-201ENST00000453810 450 ntTSL 3 BASIC4.99□□□□□ -1.61
UPF3BQ9BZI7 LINC02017-201ENST00000496829 474 ntTSL 3 BASIC4.99□□□□□ -1.61
UPF3BQ9BZI7 PARP4P3-201ENST00000510265 317 ntBASIC4.99□□□□□ -1.61
UPF3BQ9BZI7 AC008728.1-201ENST00000512730 691 ntTSL 2 BASIC4.99□□□□□ -1.61
UPF3BQ9BZI7 SNORA67.7-201ENST00000516664 135 ntBASIC4.99□□□□□ -1.61
UPF3BQ9BZI7 MYL12AP1-201ENST00000518490 515 ntBASIC4.99□□□□□ -1.61
UPF3BQ9BZI7 MRPL49P2-201ENST00000521066 465 ntBASIC4.99□□□□□ -1.61
UPF3BQ9BZI7 AP001804.2-201ENST00000533932 910 ntBASIC4.99□□□□□ -1.61
UPF3BQ9BZI7 MIR100HG-221ENST00000534297 572 ntTSL 4 BASIC4.99□□□□□ -1.61
UPF3BQ9BZI7 SNHG1-208ENST00000538266 347 ntTSL 3 BASIC4.99□□□□□ -1.61
UPF3BQ9BZI7 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC4.99□□□□□ -1.61
UPF3BQ9BZI7 MIR3158-1-201ENST00000583596 81 ntBASIC4.99□□□□□ -1.61
UPF3BQ9BZI7 RPL38-208ENST00000584577 344 ntAPPRIS ALT1 TSL 3 BASIC4.99□□□□□ -1.61
UPF3BQ9BZI7 AC006130.2-201ENST00000586202 326 ntBASIC4.99□□□□□ -1.61
UPF3BQ9BZI7 LINC02565-201ENST00000592678 478 ntTSL 2 BASIC4.99□□□□□ -1.61
UPF3BQ9BZI7 AC007193.1-201ENST00000599645 448 ntTSL 5 BASIC4.99□□□□□ -1.61
UPF3BQ9BZI7 ADGRG2-201ENST00000340581 3594 ntTSL 2 BASIC4.99□□□□□ -1.61
UPF3BQ9BZI7 IQCH-214ENST00000629425 1822 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
UPF3BQ9BZI7 AC027290.2-201ENST00000623210 18662 ntBASIC4.99□□□□□ -1.61
UPF3BQ9BZI7 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC4.99□□□□□ -1.61
UPF3BQ9BZI7 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.99□□□□□ -1.61
UPF3BQ9BZI7 SMG1P1-206ENST00000431681 2913 ntTSL 2 BASIC4.99□□□□□ -1.61
UPF3BQ9BZI7 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC4.99□□□□□ -1.61
UPF3BQ9BZI7 NOL8P1-201ENST00000508336 3529 ntBASIC4.98□□□□□ -1.61
UPF3BQ9BZI7 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC4.98□□□□□ -1.61
UPF3BQ9BZI7 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC4.98□□□□□ -1.61
UPF3BQ9BZI7 AL121657.1-201ENST00000327215 531 ntBASIC4.98□□□□□ -1.61
UPF3BQ9BZI7 MIR448-201ENST00000362131 111 ntBASIC4.98□□□□□ -1.61
UPF3BQ9BZI7 RNU6-525P-201ENST00000363685 104 ntBASIC4.98□□□□□ -1.61
UPF3BQ9BZI7 AL607077.1-201ENST00000401718 499 ntBASIC4.98□□□□□ -1.61
UPF3BQ9BZI7 AL121834.1-202ENST00000404494 277 ntBASIC4.98□□□□□ -1.61
UPF3BQ9BZI7 RN7SKP202-201ENST00000410439 330 ntBASIC4.98□□□□□ -1.61
UPF3BQ9BZI7 RPL6P29-201ENST00000414863 865 ntBASIC4.98□□□□□ -1.61
UPF3BQ9BZI7 RPS29P17-201ENST00000430795 166 ntBASIC4.98□□□□□ -1.61
UPF3BQ9BZI7 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
UPF3BQ9BZI7 LMOD2-201ENST00000456238 918 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
UPF3BQ9BZI7 LINC00973-201ENST00000473756 962 ntTSL 2 BASIC4.98□□□□□ -1.61
UPF3BQ9BZI7 AF213884.1-201ENST00000488102 463 ntBASIC4.98□□□□□ -1.61
UPF3BQ9BZI7 MTND4LP31-201ENST00000514859 294 ntBASIC4.98□□□□□ -1.61
UPF3BQ9BZI7 AC016598.2-201ENST00000514942 525 ntTSL 5 BASIC4.98□□□□□ -1.61
UPF3BQ9BZI7 RNA5SP73-201ENST00000516744 108 ntBASIC4.98□□□□□ -1.61
UPF3BQ9BZI7 TRAPPC2P2-201ENST00000517589 409 ntBASIC4.98□□□□□ -1.61
UPF3BQ9BZI7 AC084024.3-201ENST00000520598 562 ntTSL 4 BASIC4.98□□□□□ -1.61
UPF3BQ9BZI7 OR5M7P-201ENST00000526140 972 ntBASIC4.98□□□□□ -1.61
UPF3BQ9BZI7 AP000889.1-201ENST00000530968 660 ntBASIC4.98□□□□□ -1.61
UPF3BQ9BZI7 PDCD5P1-201ENST00000543528 309 ntBASIC4.98□□□□□ -1.61
UPF3BQ9BZI7 OR8R1P-201ENST00000543943 764 ntBASIC4.98□□□□□ -1.61
UPF3BQ9BZI7 LINC02386-201ENST00000551202 509 ntTSL 3 BASIC4.98□□□□□ -1.61
UPF3BQ9BZI7 AL049875.1-202ENST00000556620 857 ntTSL 3 BASIC4.98□□□□□ -1.61
UPF3BQ9BZI7 AC013565.1-201ENST00000565938 597 ntTSL 2 BASIC4.98□□□□□ -1.61
UPF3BQ9BZI7 CHEK2P2-203ENST00000566448 670 ntTSL 5 BASIC4.98□□□□□ -1.61
UPF3BQ9BZI7 AC007599.1-201ENST00000568688 1174 ntBASIC4.98□□□□□ -1.61
UPF3BQ9BZI7 LINC01630-204ENST00000582689 539 ntTSL 4 BASIC4.98□□□□□ -1.61
UPF3BQ9BZI7 AL157938.2-204ENST00000589667 826 ntTSL 5 BASIC4.98□□□□□ -1.61
UPF3BQ9BZI7 AC008638.3-201ENST00000603341 463 ntBASIC4.98□□□□□ -1.61
UPF3BQ9BZI7 SLC38A2-214ENST00000612232 1221 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
UPF3BQ9BZI7 AC015922.4-201ENST00000612568 690 ntBASIC4.98□□□□□ -1.61
UPF3BQ9BZI7 AC114781.5-201ENST00000615297 108 ntBASIC4.98□□□□□ -1.61
UPF3BQ9BZI7 HMGN2-210ENST00000619352 1148 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
UPF3BQ9BZI7 MIR6075-201ENST00000620782 95 ntBASIC4.98□□□□□ -1.61
UPF3BQ9BZI7 AL023881.1-201ENST00000621088 301 ntBASIC4.98□□□□□ -1.61
UPF3BQ9BZI7 AC095038.2-201ENST00000621464 1070 ntBASIC4.98□□□□□ -1.61
UPF3BQ9BZI7 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
UPF3BQ9BZI7 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
UPF3BQ9BZI7 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC4.98□□□□□ -1.61
UPF3BQ9BZI7 C12orf60-201ENST00000330828 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
UPF3BQ9BZI7 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
UPF3BQ9BZI7 AC068254.2-201ENST00000623938 3577 ntBASIC4.98□□□□□ -1.61
UPF3BQ9BZI7 ZNF85-201ENST00000300540 1531 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
UPF3BQ9BZI7 AC092650.1-201ENST00000447571 1808 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
UPF3BQ9BZI7 ZNF573-217ENST00000590414 2225 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
UPF3BQ9BZI7 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
UPF3BQ9BZI7 FBXO8-205ENST00000615392 1591 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
UPF3BQ9BZI7 LZTFL1-216ENST00000539217 4113 ntTSL 2 BASIC4.97□□□□□ -1.61
UPF3BQ9BZI7 PLET1-201ENST00000338832 1215 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
UPF3BQ9BZI7 RNU1-132P-201ENST00000364300 164 ntBASIC4.97□□□□□ -1.61
UPF3BQ9BZI7 AL512430.2-201ENST00000406786 339 ntBASIC4.97□□□□□ -1.61
UPF3BQ9BZI7 RNU6-628P-201ENST00000410675 107 ntBASIC4.97□□□□□ -1.61
UPF3BQ9BZI7 AC011933.1-201ENST00000413334 321 ntBASIC4.97□□□□□ -1.61
UPF3BQ9BZI7 AC010163.2-201ENST00000416341 381 ntTSL 2 BASIC4.97□□□□□ -1.61
UPF3BQ9BZI7 ARL4AP4-201ENST00000434170 518 ntBASIC4.97□□□□□ -1.61
UPF3BQ9BZI7 ELOCP18-201ENST00000434209 337 ntBASIC4.97□□□□□ -1.61
UPF3BQ9BZI7 MTND6P18-201ENST00000439477 513 ntBASIC4.97□□□□□ -1.61
UPF3BQ9BZI7 C2orf80-207ENST00000453017 722 ntTSL 3 BASIC4.97□□□□□ -1.61
UPF3BQ9BZI7 AC116533.1-201ENST00000459748 321 ntBASIC4.97□□□□□ -1.61
UPF3BQ9BZI7 AC098583.1-201ENST00000480875 255 ntBASIC4.97□□□□□ -1.61
UPF3BQ9BZI7 AC107027.1-201ENST00000503006 575 ntTSL 2 BASIC4.97□□□□□ -1.61
UPF3BQ9BZI7 AC017037.1-201ENST00000508460 471 ntBASIC4.97□□□□□ -1.61
UPF3BQ9BZI7 KCTD9P6-201ENST00000522306 950 ntBASIC4.97□□□□□ -1.61
UPF3BQ9BZI7 AC109635.6-201ENST00000525487 1113 ntBASIC4.97□□□□□ -1.61
UPF3BQ9BZI7 CYCSP29-201ENST00000533731 318 ntBASIC4.97□□□□□ -1.61
UPF3BQ9BZI7 EQTN-204ENST00000537675 879 ntAPPRIS ALT2 TSL 1 (best) BASIC4.97□□□□□ -1.61
UPF3BQ9BZI7 LINC02423-202ENST00000542577 460 ntTSL 3 BASIC4.97□□□□□ -1.61
UPF3BQ9BZI7 LINC02394-201ENST00000549140 543 ntTSL 4 BASIC4.97□□□□□ -1.61
UPF3BQ9BZI7 AC063950.1-201ENST00000552036 308 ntBASIC4.97□□□□□ -1.61
UPF3BQ9BZI7 AC128707.1-201ENST00000552230 494 ntTSL 3 BASIC4.97□□□□□ -1.61
UPF3BQ9BZI7 AC110023.1-201ENST00000554318 457 ntTSL 3 BASIC4.97□□□□□ -1.61
UPF3BQ9BZI7 AL355073.1-201ENST00000560296 517 ntTSL 4 BASIC4.97□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 142.2 ms