Protein–RNA interactions for Protein: Q99909

SSX3, Protein SSX3, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3Q99909 RPL23AP53-201ENST00000521854 457 ntBASIC4.15□□□□□ -1.75
SSX3Q99909 AC084083.1-201ENST00000526947 722 ntTSL 5 BASIC4.15□□□□□ -1.75
SSX3Q99909 AC139103.1-201ENST00000534696 1030 ntBASIC4.15□□□□□ -1.75
SSX3Q99909 LINC02408-202ENST00000538573 559 ntTSL 4 BASIC4.15□□□□□ -1.75
SSX3Q99909 AP003717.3-201ENST00000544832 1180 ntBASIC4.15□□□□□ -1.75
SSX3Q99909 AC025263.2-201ENST00000550437 548 ntAPPRIS P1 TSL 5 BASIC4.15□□□□□ -1.75
SSX3Q99909 AC074031.1-201ENST00000550634 734 ntTSL 3 BASIC4.15□□□□□ -1.75
SSX3Q99909 LINC00254-201ENST00000563416 662 ntTSL 3 BASIC4.15□□□□□ -1.75
SSX3Q99909 AC124283.4-201ENST00000581815 456 ntBASIC4.15□□□□□ -1.75
SSX3Q99909 EIF1P5-201ENST00000585002 234 ntBASIC4.15□□□□□ -1.75
SSX3Q99909 PSMD5-AS1-203ENST00000589026 525 ntTSL 5 BASIC4.15□□□□□ -1.75
SSX3Q99909 AC125494.3-201ENST00000602759 455 ntBASIC4.15□□□□□ -1.75
SSX3Q99909 AC011626.1-201ENST00000604710 562 ntBASIC4.15□□□□□ -1.75
SSX3Q99909 AP005229.2-201ENST00000609980 697 ntBASIC4.15□□□□□ -1.75
SSX3Q99909 AC093799.2-201ENST00000610062 578 ntBASIC4.15□□□□□ -1.75
SSX3Q99909 STMN1P1-201ENST00000617809 440 ntBASIC4.15□□□□□ -1.75
SSX3Q99909 GPR34-203ENST00000620846 1282 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
SSX3Q99909 AP000943.4-201ENST00000622912 357 ntBASIC4.15□□□□□ -1.75
SSX3Q99909 AC024595.1-201ENST00000623088 387 ntBASIC4.15□□□□□ -1.75
SSX3Q99909 AC138907.10-201ENST00000623708 983 ntBASIC4.15□□□□□ -1.75
SSX3Q99909 AL353662.3-201ENST00000625131 237 ntBASIC4.15□□□□□ -1.75
SSX3Q99909 ITGA9-AS1-218ENST00000630762 751 ntTSL 5 BASIC4.15□□□□□ -1.75
SSX3Q99909 AL589740.1-205ENST00000635561 565 ntTSL 5 BASIC4.15□□□□□ -1.75
SSX3Q99909 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
SSX3Q99909 LINC01289-201ENST00000519550 3712 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
SSX3Q99909 RNMT-209ENST00000592764 4108 ntTSL 2 BASIC4.15□□□□□ -1.75
SSX3Q99909 MOCS2-203ENST00000450852 1337 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
SSX3Q99909 VCAM1-203ENST00000370115 2475 ntTSL 5 BASIC4.15□□□□□ -1.75
SSX3Q99909 AL672167.1-205ENST00000641112 3080 ntBASIC4.15□□□□□ -1.75
SSX3Q99909 MTUS1-202ENST00000297488 3731 ntAPPRIS ALT1 TSL 1 (best) BASIC4.15□□□□□ -1.75
SSX3Q99909 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC4.15□□□□□ -1.75
SSX3Q99909 EEF1A1P36-201ENST00000427807 1351 ntBASIC4.14□□□□□ -1.75
SSX3Q99909 FAM111A-201ENST00000361723 3592 ntAPPRIS P1 TSL 2 BASIC4.14□□□□□ -1.75
SSX3Q99909 IQGAP2-204ENST00000502745 3404 ntTSL 2 BASIC4.14□□□□□ -1.75
SSX3Q99909 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
SSX3Q99909 U2SURP-208ENST00000473835 7276 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
SSX3Q99909 HHLA2-210ENST00000491820 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC4.14□□□□□ -1.75
SSX3Q99909 ACTR3BP5-201ENST00000448440 1479 ntBASIC4.14□□□□□ -1.75
SSX3Q99909 OR52N4-201ENST00000317254 1037 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
SSX3Q99909 RN7SKP44-201ENST00000363602 316 ntBASIC4.14□□□□□ -1.75
SSX3Q99909 SPANXN3-201ENST00000370503 590 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
SSX3Q99909 RCAN3-201ENST00000374393 382 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
SSX3Q99909 MIR550A3-201ENST00000390735 95 ntBASIC4.14□□□□□ -1.75
SSX3Q99909 AP002784.2-201ENST00000397300 549 ntBASIC4.14□□□□□ -1.75
SSX3Q99909 EEF1E1-BLOC1S5-201ENST00000397456 768 ntAPPRIS P1 TSL 3 BASIC4.14□□□□□ -1.75
SSX3Q99909 AL078604.1-201ENST00000404609 466 ntBASIC4.14□□□□□ -1.75
SSX3Q99909 PRELID3BP11-201ENST00000414230 479 ntBASIC4.14□□□□□ -1.75
SSX3Q99909 GJA6P-201ENST00000415117 1042 ntBASIC4.14□□□□□ -1.75
SSX3Q99909 AC097467.3-223ENST00000417474 449 ntTSL 3 BASIC4.14□□□□□ -1.75
SSX3Q99909 AC114814.2-201ENST00000419195 485 ntBASIC4.14□□□□□ -1.75
SSX3Q99909 PCDH9-AS2-201ENST00000419371 538 ntTSL 3 BASIC4.14□□□□□ -1.75
SSX3Q99909 NPM1P34-201ENST00000428821 893 ntBASIC4.14□□□□□ -1.75
SSX3Q99909 KCNIP1-205ENST00000434108 726 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
SSX3Q99909 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC4.14□□□□□ -1.75
SSX3Q99909 AL772161.1-201ENST00000439130 476 ntBASIC4.14□□□□□ -1.75
SSX3Q99909 AL137076.1-201ENST00000441046 551 ntTSL 2 BASIC4.14□□□□□ -1.75
SSX3Q99909 AC092637.1-201ENST00000444745 510 ntTSL 5 BASIC4.14□□□□□ -1.75
SSX3Q99909 NOP56P2-201ENST00000447491 769 ntBASIC4.14□□□□□ -1.75
SSX3Q99909 OTX2P1-201ENST00000450956 354 ntBASIC4.14□□□□□ -1.75
SSX3Q99909 RPL7P61-201ENST00000451721 751 ntBASIC4.14□□□□□ -1.75
SSX3Q99909 SKINT1L-203ENST00000453388 749 ntTSL 5 BASIC4.14□□□□□ -1.75
SSX3Q99909 LINC00456-201ENST00000453862 692 ntTSL 3 BASIC4.14□□□□□ -1.75
SSX3Q99909 SCARNA10-201ENST00000459255 330 ntBASIC4.14□□□□□ -1.75
SSX3Q99909 AC092905.1-201ENST00000467527 949 ntBASIC4.14□□□□□ -1.75
SSX3Q99909 AC026316.2-201ENST00000473110 263 ntTSL 3 BASIC4.14□□□□□ -1.75
SSX3Q99909 AC104629.1-201ENST00000494226 508 ntBASIC4.14□□□□□ -1.75
SSX3Q99909 AC105924.1-201ENST00000504057 339 ntTSL 3 BASIC4.14□□□□□ -1.75
SSX3Q99909 AC093772.1-201ENST00000513519 506 ntTSL 2 BASIC4.14□□□□□ -1.75
SSX3Q99909 LY96-202ENST00000518893 430 ntTSL 3 BASIC4.14□□□□□ -1.75
SSX3Q99909 SKP1-208ENST00000521216 899 ntAPPRIS ALT1 TSL 5 BASIC4.14□□□□□ -1.75
SSX3Q99909 LINC00944-201ENST00000536517 421 ntTSL 2 BASIC4.14□□□□□ -1.75
SSX3Q99909 ALOX12P2-208ENST00000574183 519 ntTSL 3 BASIC4.14□□□□□ -1.75
SSX3Q99909 LINC01900-202ENST00000584898 603 ntTSL 5 BASIC4.14□□□□□ -1.75
SSX3Q99909 AC008543.4-201ENST00000585694 442 ntTSL 2 BASIC4.14□□□□□ -1.75
SSX3Q99909 AC005255.1-201ENST00000593748 216 ntBASIC4.14□□□□□ -1.75
SSX3Q99909 AC010618.3-202ENST00000598141 476 ntTSL 3 BASIC4.14□□□□□ -1.75
SSX3Q99909 NTAN1P1-201ENST00000603150 646 ntBASIC4.14□□□□□ -1.75
SSX3Q99909 AC115621.1-201ENST00000604653 858 ntBASIC4.14□□□□□ -1.75
SSX3Q99909 AC133644.2-201ENST00000608142 540 ntBASIC4.14□□□□□ -1.75
SSX3Q99909 AC016542.1-201ENST00000608259 493 ntBASIC4.14□□□□□ -1.75
SSX3Q99909 CT45A6-201ENST00000612878 770 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
SSX3Q99909 DEC1-204ENST00000614246 210 ntAPPRIS ALT2 TSL 1 (best) BASIC4.14□□□□□ -1.75
SSX3Q99909 AL121873.1-201ENST00000616013 524 ntBASIC4.14□□□□□ -1.75
SSX3Q99909 AC018926.1-201ENST00000616335 435 ntBASIC4.14□□□□□ -1.75
SSX3Q99909 FRG1HP-204ENST00000617940 757 ntBASIC4.14□□□□□ -1.75
SSX3Q99909 AC253576.2-201ENST00000618815 580 ntBASIC4.14□□□□□ -1.75
SSX3Q99909 Metazoa_SRP.93-201ENST00000622525 276 ntBASIC4.14□□□□□ -1.75
SSX3Q99909 AC091905.4-201ENST00000623432 202 ntBASIC4.14□□□□□ -1.75
SSX3Q99909 CRNDE-213ENST00000635991 546 ntTSL 5 BASIC4.14□□□□□ -1.75
SSX3Q99909 WISP3-211ENST00000639360 1026 ntTSL 5 BASIC4.14□□□□□ -1.75
SSX3Q99909 WDR17-204ENST00000507824 4119 ntTSL 5 BASIC4.14□□□□□ -1.75
SSX3Q99909 IFI44L-201ENST00000370751 5874 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
SSX3Q99909 PLCB1-233ENST00000637919 5074 ntTSL 5 BASIC4.14□□□□□ -1.75
SSX3Q99909 OR11H5P-202ENST00000641612 1325 ntBASIC4.14□□□□□ -1.75
SSX3Q99909 TMEM255A-202ENST00000371352 2879 ntTSL 2 BASIC4.14□□□□□ -1.75
SSX3Q99909 LINC02302-201ENST00000556405 2904 ntTSL 2 BASIC4.14□□□□□ -1.75
SSX3Q99909 FAM184A-212ENST00000522284 2721 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
SSX3Q99909 SYTL2-217ENST00000528231 3536 ntAPPRIS ALT1 TSL 1 (best) BASIC4.13□□□□□ -1.75
SSX3Q99909 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
SSX3Q99909 AC073429.2-201ENST00000569694 1444 ntBASIC4.13□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 134.6 ms