Protein–RNA interactions for Protein: Q8WWI5

SLC44A1, Choline transporter-like protein 1, humanhuman

Predictions only

Length 657 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A1Q8WWI5 LINC01935-201ENST00000431897 437 ntTSL 3 BASIC4.68□□□□□ -1.66
SLC44A1Q8WWI5 EIF4EBP2P1-201ENST00000450009 343 ntBASIC4.68□□□□□ -1.66
SLC44A1Q8WWI5 AC022431.1-201ENST00000450941 438 ntBASIC4.68□□□□□ -1.66
SLC44A1Q8WWI5 TMSB4X-204ENST00000451311 628 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
SLC44A1Q8WWI5 RPL7P61-201ENST00000451721 751 ntBASIC4.68□□□□□ -1.66
SLC44A1Q8WWI5 Z95152.1-201ENST00000453556 656 ntBASIC4.68□□□□□ -1.66
SLC44A1Q8WWI5 DUXAP8-207ENST00000456786 622 ntBASIC4.68□□□□□ -1.66
SLC44A1Q8WWI5 RPS27L-205ENST00000462430 681 ntTSL 2 BASIC4.68□□□□□ -1.66
SLC44A1Q8WWI5 AC090142.1-201ENST00000465776 462 ntBASIC4.68□□□□□ -1.66
SLC44A1Q8WWI5 CASP12-210ENST00000494737 961 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
SLC44A1Q8WWI5 AC118282.1-201ENST00000506408 765 ntBASIC4.68□□□□□ -1.66
SLC44A1Q8WWI5 AC084871.1-201ENST00000508020 628 ntTSL 3 BASIC4.68□□□□□ -1.66
SLC44A1Q8WWI5 STPG2-AS1-201ENST00000508933 537 ntTSL 4 BASIC4.68□□□□□ -1.66
SLC44A1Q8WWI5 AC110775.1-201ENST00000513721 462 ntBASIC4.68□□□□□ -1.66
SLC44A1Q8WWI5 AC090151.1-201ENST00000520784 730 ntBASIC4.68□□□□□ -1.66
SLC44A1Q8WWI5 AC021242.2-201ENST00000522765 454 ntTSL 3 BASIC4.68□□□□□ -1.66
SLC44A1Q8WWI5 PDZD9-203ENST00000537222 1068 ntTSL 3 BASIC4.68□□□□□ -1.66
SLC44A1Q8WWI5 AC022929.1-201ENST00000560675 823 ntTSL 3 BASIC4.68□□□□□ -1.66
SLC44A1Q8WWI5 LINC02188-201ENST00000562064 550 ntTSL 4 BASIC4.68□□□□□ -1.66
SLC44A1Q8WWI5 AC217774.1-201ENST00000578936 517 ntTSL 4 BASIC4.68□□□□□ -1.66
SLC44A1Q8WWI5 AP005119.2-201ENST00000579735 1105 ntBASIC4.68□□□□□ -1.66
SLC44A1Q8WWI5 RN7SL176P-201ENST00000580352 264 ntBASIC4.68□□□□□ -1.66
SLC44A1Q8WWI5 PDZPH1P-202ENST00000602846 722 ntTSL 3 BASIC4.68□□□□□ -1.66
SLC44A1Q8WWI5 AP002906.1-201ENST00000603405 233 ntBASIC4.68□□□□□ -1.66
SLC44A1Q8WWI5 AC096553.1-201ENST00000605169 829 ntBASIC4.68□□□□□ -1.66
SLC44A1Q8WWI5 AC242426.3-203ENST00000606757 712 ntTSL 3 BASIC4.68□□□□□ -1.66
SLC44A1Q8WWI5 EAF1-AS1-211ENST00000610011 316 ntTSL 5 BASIC4.68□□□□□ -1.66
SLC44A1Q8WWI5 DUXAP10-204ENST00000612052 616 ntBASIC4.68□□□□□ -1.66
SLC44A1Q8WWI5 AL353726.1-201ENST00000614041 1000 ntBASIC4.68□□□□□ -1.66
SLC44A1Q8WWI5 CYCSP41-201ENST00000616920 296 ntBASIC4.68□□□□□ -1.66
SLC44A1Q8WWI5 AL390964.1-201ENST00000622486 845 ntTSL 3 BASIC4.68□□□□□ -1.66
SLC44A1Q8WWI5 AC007342.8-201ENST00000623278 678 ntBASIC4.68□□□□□ -1.66
SLC44A1Q8WWI5 AC145207.9-201ENST00000623802 325 ntBASIC4.68□□□□□ -1.66
SLC44A1Q8WWI5 AL590396.4-201ENST00000636779 956 ntBASIC4.68□□□□□ -1.66
SLC44A1Q8WWI5 STAG2-204ENST00000371157 5991 ntAPPRIS P3 TSL 1 (best) BASIC4.68□□□□□ -1.66
SLC44A1Q8WWI5 ZNF849P-201ENST00000594711 1566 ntBASIC4.68□□□□□ -1.66
SLC44A1Q8WWI5 OR4E2-202ENST00000641524 2855 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
SLC44A1Q8WWI5 NABP1-205ENST00000425611 1878 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
SLC44A1Q8WWI5 CASC19-284ENST00000642142 1868 ntBASIC4.68□□□□□ -1.66
SLC44A1Q8WWI5 AC008505.1-201ENST00000637582 2025 ntTSL 5 BASIC4.68□□□□□ -1.66
SLC44A1Q8WWI5 OR56A1-202ENST00000641423 6096 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
SLC44A1Q8WWI5 EMSY-215ENST00000533248 3798 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
SLC44A1Q8WWI5 SEC31A-237ENST00000513858 3687 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
SLC44A1Q8WWI5 SCN1A-218ENST00000640036 8131 ntAPPRIS ALT1 TSL 5 BASIC4.68□□□□□ -1.66
SLC44A1Q8WWI5 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
SLC44A1Q8WWI5 ABCA12-201ENST00000272895 9100 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
SLC44A1Q8WWI5 PRUNE2-208ENST00000443509 12356 ntAPPRIS ALT2 TSL 5 BASIC4.67□□□□□ -1.66
SLC44A1Q8WWI5 AC053481.2-202ENST00000582394 1500 ntBASIC4.67□□□□□ -1.66
SLC44A1Q8WWI5 GRIK2-204ENST00000369137 4272 ntTSL 5 BASIC4.67□□□□□ -1.66
SLC44A1Q8WWI5 DDX20-202ENST00000475700 4332 ntTSL 2 BASIC4.67□□□□□ -1.66
SLC44A1Q8WWI5 KCNJ6-201ENST00000609713 19645 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
SLC44A1Q8WWI5 AC073429.2-201ENST00000569694 1444 ntBASIC4.67□□□□□ -1.66
SLC44A1Q8WWI5 LINC00862-204ENST00000637098 1400 ntTSL 5 BASIC4.67□□□□□ -1.66
SLC44A1Q8WWI5 C1orf100-201ENST00000308105 579 ntAPPRIS P1 TSL 2 BASIC4.67□□□□□ -1.66
SLC44A1Q8WWI5 DEFB128-201ENST00000334391 373 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
SLC44A1Q8WWI5 RNU4-4P-201ENST00000364588 130 ntBASIC4.67□□□□□ -1.66
SLC44A1Q8WWI5 RNU6-452P-201ENST00000384406 107 ntBASIC4.67□□□□□ -1.66
SLC44A1Q8WWI5 RNU6ATAC7P-201ENST00000408111 127 ntBASIC4.67□□□□□ -1.66
SLC44A1Q8WWI5 AP000357.1-201ENST00000409926 1165 ntBASIC4.67□□□□□ -1.66
SLC44A1Q8WWI5 RN7SKP167-201ENST00000411047 285 ntBASIC4.67□□□□□ -1.66
SLC44A1Q8WWI5 TTTY21B-201ENST00000421353 307 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
SLC44A1Q8WWI5 AC113331.1-201ENST00000428160 869 ntTSL 2 BASIC4.67□□□□□ -1.66
SLC44A1Q8WWI5 TTTY21-201ENST00000430228 307 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
SLC44A1Q8WWI5 AC002378.1-201ENST00000432360 298 ntTSL 3 BASIC4.67□□□□□ -1.66
SLC44A1Q8WWI5 AL358972.1-201ENST00000434356 466 ntTSL 2 BASIC4.67□□□□□ -1.66
SLC44A1Q8WWI5 MTND6P18-201ENST00000439477 513 ntBASIC4.67□□□□□ -1.66
SLC44A1Q8WWI5 AC000041.1-201ENST00000439655 175 ntBASIC4.67□□□□□ -1.66
SLC44A1Q8WWI5 AC092625.1-201ENST00000442706 393 ntTSL 3 BASIC4.67□□□□□ -1.66
SLC44A1Q8WWI5 AC092647.3-201ENST00000443044 633 ntBASIC4.67□□□□□ -1.66
SLC44A1Q8WWI5 AC064871.1-201ENST00000444562 427 ntTSL 3 BASIC4.67□□□□□ -1.66
SLC44A1Q8WWI5 KCNQ5-IT1-201ENST00000445310 563 ntTSL 2 BASIC4.67□□□□□ -1.66
SLC44A1Q8WWI5 AURKAPS2-201ENST00000454983 333 ntBASIC4.67□□□□□ -1.66
SLC44A1Q8WWI5 DWORF-201ENST00000489090 873 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
SLC44A1Q8WWI5 PTPN20-213ENST00000502705 854 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
SLC44A1Q8WWI5 GCSHP4-201ENST00000538792 439 ntBASIC4.67□□□□□ -1.66
SLC44A1Q8WWI5 AP002518.2-201ENST00000544925 393 ntTSL 5 BASIC4.67□□□□□ -1.66
SLC44A1Q8WWI5 AC008083.2-201ENST00000546707 476 ntBASIC4.67□□□□□ -1.66
SLC44A1Q8WWI5 AC004801.3-201ENST00000547602 962 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
SLC44A1Q8WWI5 AC016987.1-201ENST00000558587 499 ntTSL 2 BASIC4.67□□□□□ -1.66
SLC44A1Q8WWI5 AC016134.1-201ENST00000565259 701 ntTSL 3 BASIC4.67□□□□□ -1.66
SLC44A1Q8WWI5 AC091178.1-203ENST00000584586 279 ntBASIC4.67□□□□□ -1.66
SLC44A1Q8WWI5 RN7SL622P-201ENST00000585292 275 ntBASIC4.67□□□□□ -1.66
SLC44A1Q8WWI5 DAB1-AS1-208ENST00000586465 748 ntTSL 5 BASIC4.67□□□□□ -1.66
SLC44A1Q8WWI5 AC006116.5-201ENST00000591936 559 ntBASIC4.67□□□□□ -1.66
SLC44A1Q8WWI5 AL022067.1-201ENST00000602426 454 ntBASIC4.67□□□□□ -1.66
SLC44A1Q8WWI5 AC008966.2-201ENST00000606157 453 ntBASIC4.67□□□□□ -1.66
SLC44A1Q8WWI5 FAM27B-201ENST00000610601 213 ntBASIC4.67□□□□□ -1.66
SLC44A1Q8WWI5 FRG1HP-204ENST00000617940 757 ntBASIC4.67□□□□□ -1.66
SLC44A1Q8WWI5 SLAIN1-204ENST00000358679 2075 ntAPPRIS P3 TSL 2 BASIC4.67□□□□□ -1.66
SLC44A1Q8WWI5 R3HCC1L-201ENST00000298999 3379 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
SLC44A1Q8WWI5 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
SLC44A1Q8WWI5 IPCEF1-210ENST00000519344 1621 ntAPPRIS ALT2 TSL 5 BASIC4.67□□□□□ -1.66
SLC44A1Q8WWI5 NFIB-203ENST00000380934 2142 ntTSL 2 BASIC4.67□□□□□ -1.66
SLC44A1Q8WWI5 ETV1-205ENST00000405192 4402 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
SLC44A1Q8WWI5 SLC17A4-201ENST00000377905 3616 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
SLC44A1Q8WWI5 IRF5P1-201ENST00000504852 2164 ntBASIC4.67□□□□□ -1.66
SLC44A1Q8WWI5 CCT8P1-201ENST00000413611 1657 ntBASIC4.67□□□□□ -1.66
SLC44A1Q8WWI5 CEP192-203ENST00000506447 7960 ntAPPRIS P2 TSL 5 BASIC4.67□□□□□ -1.66
SLC44A1Q8WWI5 FCHSD2-205ENST00000409853 1867 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
SLC44A1Q8WWI5 AL442639.1-201ENST00000625030 1899 ntBASIC4.66□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 74.5 ms