Protein–RNA interactions for Protein: Q6UX27

VSTM1, V-set and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSTM1Q6UX27 AC110079.2-201ENST00000629462 1512 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
VSTM1Q6UX27 SPART-202ENST00000438666 4789 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
VSTM1Q6UX27 FAM135A-210ENST00000505868 5173 ntTSL 5 BASIC5.17□□□□□ -1.58
VSTM1Q6UX27 CFAP47-203ENST00000378653 9943 ntAPPRIS P2 TSL 5 BASIC5.17□□□□□ -1.58
VSTM1Q6UX27 RASGEF1B-207ENST00000509081 3016 ntAPPRIS ALT1 TSL 5 BASIC5.17□□□□□ -1.58
VSTM1Q6UX27 USP50-205ENST00000616326 1419 ntAPPRIS ALT2 TSL 5 BASIC5.17□□□□□ -1.58
VSTM1Q6UX27 DAZ1-205ENST00000540248 3268 ntTSL 5 BASIC5.17□□□□□ -1.58
VSTM1Q6UX27 RNU6-236P-201ENST00000363886 106 ntBASIC5.17□□□□□ -1.58
VSTM1Q6UX27 CCL7-203ENST00000394630 687 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
VSTM1Q6UX27 AL138749.1-201ENST00000397864 791 ntTSL 5 BASIC5.17□□□□□ -1.58
VSTM1Q6UX27 CXCL8-202ENST00000401931 700 ntAPPRIS ALT1 TSL 1 (best) BASIC5.17□□□□□ -1.58
VSTM1Q6UX27 HMGB1P13-201ENST00000406019 642 ntBASIC5.17□□□□□ -1.58
VSTM1Q6UX27 RN7SKP100-201ENST00000411258 284 ntBASIC5.17□□□□□ -1.58
VSTM1Q6UX27 HMGB3P31-201ENST00000413333 595 ntBASIC5.17□□□□□ -1.58
VSTM1Q6UX27 AL158837.1-201ENST00000417644 452 ntTSL 2 BASIC5.17□□□□□ -1.58
VSTM1Q6UX27 MTND2P18-201ENST00000419962 1030 ntBASIC5.17□□□□□ -1.58
VSTM1Q6UX27 AL078590.2-202ENST00000422736 568 ntTSL 3 BASIC5.17□□□□□ -1.58
VSTM1Q6UX27 HIGD1AP12-201ENST00000427832 281 ntBASIC5.17□□□□□ -1.58
VSTM1Q6UX27 AC009478.1-201ENST00000429816 562 ntTSL 3 BASIC5.17□□□□□ -1.58
VSTM1Q6UX27 MOB1AP1-201ENST00000430903 535 ntBASIC5.17□□□□□ -1.58
VSTM1Q6UX27 AL590867.3-201ENST00000436953 438 ntTSL 3 BASIC5.17□□□□□ -1.58
VSTM1Q6UX27 AC097499.1-201ENST00000444277 208 ntBASIC5.17□□□□□ -1.58
VSTM1Q6UX27 TTTY22-201ENST00000445253 427 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
VSTM1Q6UX27 PTENP1-201ENST00000447117 1215 ntBASIC5.17□□□□□ -1.58
VSTM1Q6UX27 OR1H1P-201ENST00000448731 937 ntBASIC5.17□□□□□ -1.58
VSTM1Q6UX27 TPTE2P6-203ENST00000450973 649 ntTSL 5 BASIC5.17□□□□□ -1.58
VSTM1Q6UX27 HSPE1P22-201ENST00000456856 327 ntBASIC5.17□□□□□ -1.58
VSTM1Q6UX27 PSMC1P13-201ENST00000458195 985 ntBASIC5.17□□□□□ -1.58
VSTM1Q6UX27 RN7SL517P-201ENST00000462240 305 ntBASIC5.17□□□□□ -1.58
VSTM1Q6UX27 DENND6A-AS1-201ENST00000470427 364 ntTSL 2 BASIC5.17□□□□□ -1.58
VSTM1Q6UX27 RPS29P22-201ENST00000472363 168 ntBASIC5.17□□□□□ -1.58
VSTM1Q6UX27 ALG13-211ENST00000473389 693 ntTSL 2 BASIC5.17□□□□□ -1.58
VSTM1Q6UX27 SOX2-OT-207ENST00000476964 606 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
VSTM1Q6UX27 PLSCR5-202ENST00000482567 1018 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
VSTM1Q6UX27 AC023050.1-201ENST00000498198 304 ntBASIC5.17□□□□□ -1.58
VSTM1Q6UX27 F11-AS1-201ENST00000505103 1178 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
VSTM1Q6UX27 ENPP7P9-201ENST00000514456 627 ntBASIC5.17□□□□□ -1.58
VSTM1Q6UX27 AL671862.1-201ENST00000515851 349 ntBASIC5.17□□□□□ -1.58
VSTM1Q6UX27 RNA5SP392-201ENST00000516905 112 ntBASIC5.17□□□□□ -1.58
VSTM1Q6UX27 AC090809.1-201ENST00000524132 570 ntTSL 4 BASIC5.17□□□□□ -1.58
VSTM1Q6UX27 AC107882.1-201ENST00000530837 477 ntTSL 3 BASIC5.17□□□□□ -1.58
VSTM1Q6UX27 AC110275.1-201ENST00000534420 623 ntAPPRIS P1 TSL 4 BASIC5.17□□□□□ -1.58
VSTM1Q6UX27 AC130415.1-201ENST00000547569 1010 ntTSL 4 BASIC5.17□□□□□ -1.58
VSTM1Q6UX27 AC130462.1-201ENST00000548144 549 ntTSL 5 BASIC5.17□□□□□ -1.58
VSTM1Q6UX27 NOVA1-AS1-203ENST00000552101 468 ntTSL 3 BASIC5.17□□□□□ -1.58
VSTM1Q6UX27 LINC02170-201ENST00000561519 555 ntTSL 4 BASIC5.17□□□□□ -1.58
VSTM1Q6UX27 AC006270.1-201ENST00000582889 478 ntTSL 3 BASIC5.17□□□□□ -1.58
VSTM1Q6UX27 SOX2-OT-224ENST00000595313 716 ntTSL 5 BASIC5.17□□□□□ -1.58
VSTM1Q6UX27 AL161896.1-201ENST00000597248 508 ntTSL 4 BASIC5.17□□□□□ -1.58
VSTM1Q6UX27 AC010424.2-201ENST00000607594 443 ntBASIC5.17□□□□□ -1.58
VSTM1Q6UX27 AC013468.1-201ENST00000608680 598 ntBASIC5.17□□□□□ -1.58
VSTM1Q6UX27 AC009237.15-201ENST00000610252 501 ntBASIC5.17□□□□□ -1.58
VSTM1Q6UX27 AC007497.1-201ENST00000610421 561 ntBASIC5.17□□□□□ -1.58
VSTM1Q6UX27 NAA60-237ENST00000615865 326 ntTSL 5 BASIC5.17□□□□□ -1.58
VSTM1Q6UX27 MIR8069-1-201ENST00000616627 86 ntBASIC5.17□□□□□ -1.58
VSTM1Q6UX27 MIR8069-2-201ENST00000621412 86 ntBASIC5.17□□□□□ -1.58
VSTM1Q6UX27 AC009303.2-205ENST00000627670 1091 ntTSL 5 BASIC5.17□□□□□ -1.58
VSTM1Q6UX27 AC134980.1-203ENST00000640541 570 ntTSL 4 BASIC5.17□□□□□ -1.58
VSTM1Q6UX27 OSBPL9P1-201ENST00000604744 1469 ntBASIC5.17□□□□□ -1.58
VSTM1Q6UX27 AC139713.2-209ENST00000509873 1303 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
VSTM1Q6UX27 LMNTD1-202ENST00000413632 1520 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
VSTM1Q6UX27 MECOM-217ENST00000494292 3939 ntAPPRIS ALT2 TSL 5 BASIC5.16□□□□□ -1.58
VSTM1Q6UX27 SMG1P4-204ENST00000523028 4131 ntBASIC5.16□□□□□ -1.58
VSTM1Q6UX27 CSMD3-204ENST00000455883 12485 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
VSTM1Q6UX27 MTX3-203ENST00000512560 4799 ntTSL 2 BASIC5.16□□□□□ -1.58
VSTM1Q6UX27 RANBP3L-201ENST00000296604 3104 ntAPPRIS P3 TSL 1 (best) BASIC5.16□□□□□ -1.58
VSTM1Q6UX27 FABP4-201ENST00000256104 941 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
VSTM1Q6UX27 RNA5SP27-201ENST00000363839 119 ntBASIC5.16□□□□□ -1.58
VSTM1Q6UX27 RNVU1-6-201ENST00000364688 164 ntBASIC5.16□□□□□ -1.58
VSTM1Q6UX27 SNRPE-201ENST00000367208 355 ntTSL 2 BASIC5.16□□□□□ -1.58
VSTM1Q6UX27 R3HCC1L-204ENST00000370586 941 ntTSL 3 BASIC5.16□□□□□ -1.58
VSTM1Q6UX27 S100G-201ENST00000380200 455 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
VSTM1Q6UX27 HMGB3P18-201ENST00000406327 590 ntBASIC5.16□□□□□ -1.58
VSTM1Q6UX27 RNA5SP345-201ENST00000410646 108 ntBASIC5.16□□□□□ -1.58
VSTM1Q6UX27 RPS7P9-201ENST00000414704 586 ntBASIC5.16□□□□□ -1.58
VSTM1Q6UX27 TBCAP2-201ENST00000416175 326 ntBASIC5.16□□□□□ -1.58
VSTM1Q6UX27 AL356320.2-201ENST00000417263 507 ntBASIC5.16□□□□□ -1.58
VSTM1Q6UX27 TMBIM7P-201ENST00000418074 855 ntBASIC5.16□□□□□ -1.58
VSTM1Q6UX27 QRSL1P2-201ENST00000418582 964 ntBASIC5.16□□□□□ -1.58
VSTM1Q6UX27 HMGB1P49-201ENST00000418882 569 ntBASIC5.16□□□□□ -1.58
VSTM1Q6UX27 LINC00400-201ENST00000425609 547 ntTSL 3 BASIC5.16□□□□□ -1.58
VSTM1Q6UX27 C6orf52-203ENST00000426700 493 ntAPPRIS P2 TSL 2 BASIC5.16□□□□□ -1.58
VSTM1Q6UX27 AL451140.1-201ENST00000430534 371 ntTSL 3 BASIC5.16□□□□□ -1.58
VSTM1Q6UX27 AL589935.1-218ENST00000434683 529 ntTSL 3 BASIC5.16□□□□□ -1.58
VSTM1Q6UX27 MTND4P32-201ENST00000437189 1237 ntBASIC5.16□□□□□ -1.58
VSTM1Q6UX27 AL096678.1-201ENST00000438877 472 ntTSL 3 BASIC5.16□□□□□ -1.58
VSTM1Q6UX27 AL354794.1-201ENST00000442103 516 ntTSL 3 BASIC5.16□□□□□ -1.58
VSTM1Q6UX27 RNF148-202ENST00000447240 839 ntTSL 2 BASIC5.16□□□□□ -1.58
VSTM1Q6UX27 AC000111.2-201ENST00000448200 210 ntBASIC5.16□□□□□ -1.58
VSTM1Q6UX27 AF127577.5-201ENST00000449746 446 ntTSL 3 BASIC5.16□□□□□ -1.58
VSTM1Q6UX27 AC234781.3-201ENST00000452540 973 ntBASIC5.16□□□□□ -1.58
VSTM1Q6UX27 PRDX3P4-201ENST00000470828 747 ntBASIC5.16□□□□□ -1.58
VSTM1Q6UX27 AC104619.2-201ENST00000514293 646 ntTSL 3 BASIC5.16□□□□□ -1.58
VSTM1Q6UX27 MTERF3-203ENST00000522822 1148 ntTSL 2 BASIC5.16□□□□□ -1.58
VSTM1Q6UX27 AL078612.2-201ENST00000525133 646 ntTSL 3 BASIC5.16□□□□□ -1.58
VSTM1Q6UX27 AP002765.2-201ENST00000532961 666 ntTSL 3 BASIC5.16□□□□□ -1.58
VSTM1Q6UX27 TRAV30-201ENST00000557168 337 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
VSTM1Q6UX27 AGGF1P6-201ENST00000569213 976 ntBASIC5.16□□□□□ -1.58
VSTM1Q6UX27 MIR4270-201ENST00000581799 70 ntBASIC5.16□□□□□ -1.58
VSTM1Q6UX27 AC016229.1-201ENST00000589242 487 ntTSL 5 BASIC5.16□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 76.9 ms