Protein–RNA interactions for Protein: Q6P9A3

ZNF549, Zinc finger protein 549, humanhuman

Predictions only

Length 640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF549Q6P9A3 AC006504.5-202ENST00000586784 656 ntTSL 2 BASIC4.77□□□□□ -1.65
ZNF549Q6P9A3 AC118757.1-201ENST00000586982 453 ntTSL 2 BASIC4.77□□□□□ -1.65
ZNF549Q6P9A3 AC024592.1-202ENST00000590441 341 ntTSL 3 BASIC4.77□□□□□ -1.65
ZNF549Q6P9A3 AC087763.1-201ENST00000603391 286 ntBASIC4.77□□□□□ -1.65
ZNF549Q6P9A3 AL592494.3-201ENST00000609485 464 ntBASIC4.77□□□□□ -1.65
ZNF549Q6P9A3 AC131159.1-201ENST00000621854 213 ntBASIC4.77□□□□□ -1.65
ZNF549Q6P9A3 AC067852.7-201ENST00000623270 535 ntBASIC4.77□□□□□ -1.65
ZNF549Q6P9A3 AC092608.3-201ENST00000625017 386 ntBASIC4.77□□□□□ -1.65
ZNF549Q6P9A3 GMFB-210ENST00000628554 639 ntTSL 4 BASIC4.77□□□□□ -1.65
ZNF549Q6P9A3 AL355306.2-208ENST00000634868 1251 ntTSL 5 BASIC4.77□□□□□ -1.65
ZNF549Q6P9A3 LINC01709-202ENST00000635702 1204 ntTSL 5 BASIC4.77□□□□□ -1.65
ZNF549Q6P9A3 AC007671.2-201ENST00000637344 619 ntBASIC4.77□□□□□ -1.65
ZNF549Q6P9A3 TCHHL1-201ENST00000368806 3603 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
ZNF549Q6P9A3 AC104454.1-201ENST00000421341 1401 ntBASIC4.77□□□□□ -1.65
ZNF549Q6P9A3 TLK1P1-201ENST00000456760 2440 ntBASIC4.77□□□□□ -1.65
ZNF549Q6P9A3 EYA1-205ENST00000388742 3907 ntAPPRIS P3 TSL 1 (best) BASIC4.77□□□□□ -1.65
ZNF549Q6P9A3 AC093849.1-201ENST00000563631 2209 ntBASIC4.77□□□□□ -1.65
ZNF549Q6P9A3 MPHOSPH9-211ENST00000541076 6136 ntAPPRIS ALT2 TSL 5 BASIC4.77□□□□□ -1.65
ZNF549Q6P9A3 KIAA1328-202ENST00000586135 1863 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
ZNF549Q6P9A3 CD69-201ENST00000228434 1676 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
ZNF549Q6P9A3 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
ZNF549Q6P9A3 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
ZNF549Q6P9A3 ZNF382-204ENST00000439428 2742 ntAPPRIS ALT2 TSL 1 (best) BASIC4.76□□□□□ -1.65
ZNF549Q6P9A3 COMMD8-201ENST00000381571 1469 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
ZNF549Q6P9A3 ASB5-201ENST00000296525 3031 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
ZNF549Q6P9A3 LINC02060-201ENST00000506041 1626 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
ZNF549Q6P9A3 TLR8-201ENST00000218032 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC4.76□□□□□ -1.65
ZNF549Q6P9A3 RNU4-92P-201ENST00000363783 136 ntBASIC4.76□□□□□ -1.65
ZNF549Q6P9A3 BMS1P3-201ENST00000372011 932 ntBASIC4.76□□□□□ -1.65
ZNF549Q6P9A3 EQTN-201ENST00000380031 725 ntAPPRIS ALT2 TSL 1 (best) BASIC4.76□□□□□ -1.65
ZNF549Q6P9A3 S100G-201ENST00000380200 455 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
ZNF549Q6P9A3 U3.30-201ENST00000391308 210 ntBASIC4.76□□□□□ -1.65
ZNF549Q6P9A3 CHMP1B2P-201ENST00000399581 597 ntBASIC4.76□□□□□ -1.65
ZNF549Q6P9A3 DEFB115-201ENST00000400552 267 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
ZNF549Q6P9A3 AL356131.1-201ENST00000405826 414 ntBASIC4.76□□□□□ -1.65
ZNF549Q6P9A3 RNU4-34P-201ENST00000410431 124 ntBASIC4.76□□□□□ -1.65
ZNF549Q6P9A3 RN7SKP213-201ENST00000410746 298 ntBASIC4.76□□□□□ -1.65
ZNF549Q6P9A3 RPL23AP27-201ENST00000415161 451 ntBASIC4.76□□□□□ -1.65
ZNF549Q6P9A3 AL356320.2-201ENST00000417263 507 ntBASIC4.76□□□□□ -1.65
ZNF549Q6P9A3 ELOCP9-201ENST00000418624 239 ntBASIC4.76□□□□□ -1.65
ZNF549Q6P9A3 AL590727.1-201ENST00000418652 771 ntTSL 2 BASIC4.76□□□□□ -1.65
ZNF549Q6P9A3 AC004594.1-217ENST00000422260 325 ntTSL 2 BASIC4.76□□□□□ -1.65
ZNF549Q6P9A3 NANOGP2-201ENST00000435391 727 ntBASIC4.76□□□□□ -1.65
ZNF549Q6P9A3 AL008629.1-201ENST00000438615 184 ntBASIC4.76□□□□□ -1.65
ZNF549Q6P9A3 TDGF1P1-201ENST00000445734 527 ntBASIC4.76□□□□□ -1.65
ZNF549Q6P9A3 RNF148-202ENST00000447240 839 ntTSL 2 BASIC4.76□□□□□ -1.65
ZNF549Q6P9A3 AC010890.1-201ENST00000454699 469 ntTSL 4 BASIC4.76□□□□□ -1.65
ZNF549Q6P9A3 snoU13.20-201ENST00000459180 104 ntBASIC4.76□□□□□ -1.65
ZNF549Q6P9A3 AC112206.1-201ENST00000468416 477 ntBASIC4.76□□□□□ -1.65
ZNF549Q6P9A3 TSACC-207ENST00000470342 601 ntTSL 2 BASIC4.76□□□□□ -1.65
ZNF549Q6P9A3 AC004930.1-201ENST00000470677 254 ntTSL 2 BASIC4.76□□□□□ -1.65
ZNF549Q6P9A3 DUBR-205ENST00000495228 411 ntTSL 2 BASIC4.76□□□□□ -1.65
ZNF549Q6P9A3 CRISP1-203ENST00000505118 1296 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
ZNF549Q6P9A3 LINC02500-201ENST00000512547 493 ntTSL 3 BASIC4.76□□□□□ -1.65
ZNF549Q6P9A3 AC068413.1-201ENST00000517739 776 ntTSL 5 BASIC4.76□□□□□ -1.65
ZNF549Q6P9A3 AC022784.4-201ENST00000518589 422 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
ZNF549Q6P9A3 AC107909.2-201ENST00000520844 493 ntTSL 3 BASIC4.76□□□□□ -1.65
ZNF549Q6P9A3 AP003730.2-201ENST00000526385 546 ntTSL 3 BASIC4.76□□□□□ -1.65
ZNF549Q6P9A3 AP000926.4-201ENST00000527351 454 ntBASIC4.76□□□□□ -1.65
ZNF549Q6P9A3 OR5AZ1P-201ENST00000527448 943 ntBASIC4.76□□□□□ -1.65
ZNF549Q6P9A3 AHI1-212ENST00000528103 441 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
ZNF549Q6P9A3 MIR100HG-213ENST00000531470 560 ntTSL 4 BASIC4.76□□□□□ -1.65
ZNF549Q6P9A3 NRG3-205ENST00000537893 1174 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
ZNF549Q6P9A3 AC008033.2-201ENST00000542626 177 ntBASIC4.76□□□□□ -1.65
ZNF549Q6P9A3 AL035071.2-201ENST00000565572 459 ntTSL 3 BASIC4.76□□□□□ -1.65
ZNF549Q6P9A3 MIR4789-201ENST00000577469 82 ntBASIC4.76□□□□□ -1.65
ZNF549Q6P9A3 AC007448.1-201ENST00000582714 234 ntBASIC4.76□□□□□ -1.65
ZNF549Q6P9A3 IMMP1LP1-201ENST00000605170 488 ntBASIC4.76□□□□□ -1.65
ZNF549Q6P9A3 AL138478.1-201ENST00000612252 832 ntBASIC4.76□□□□□ -1.65
ZNF549Q6P9A3 RDM1-219ENST00000615378 542 ntTSL 3 BASIC4.76□□□□□ -1.65
ZNF549Q6P9A3 RMST_5.1-201ENST00000618704 126 ntBASIC4.76□□□□□ -1.65
ZNF549Q6P9A3 AC010975.3-201ENST00000618727 978 ntBASIC4.76□□□□□ -1.65
ZNF549Q6P9A3 AC068792.1-201ENST00000621354 417 ntBASIC4.76□□□□□ -1.65
ZNF549Q6P9A3 CR381572.2-201ENST00000624852 397 ntBASIC4.76□□□□□ -1.65
ZNF549Q6P9A3 AC087632.1-216ENST00000625619 487 ntAPPRIS P1 TSL 3 BASIC4.76□□□□□ -1.65
ZNF549Q6P9A3 LDHA-225ENST00000625635 141 ntTSL 5 BASIC4.76□□□□□ -1.65
ZNF549Q6P9A3 CGA-204ENST00000627148 1010 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
ZNF549Q6P9A3 LINC01359-206ENST00000634775 888 ntTSL 5 BASIC4.76□□□□□ -1.65
ZNF549Q6P9A3 SYCP1-209ENST00000613524 3034 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
ZNF549Q6P9A3 AC053481.2-202ENST00000582394 1500 ntBASIC4.76□□□□□ -1.65
ZNF549Q6P9A3 AC011503.2-201ENST00000594230 1500 ntBASIC4.76□□□□□ -1.65
ZNF549Q6P9A3 VIM-AS1-201ENST00000437232 1351 ntTSL 2 BASIC4.76□□□□□ -1.65
ZNF549Q6P9A3 AC020633.1-201ENST00000468439 2247 ntBASIC4.76□□□□□ -1.65
ZNF549Q6P9A3 SLC26A5-208ENST00000393730 2498 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
ZNF549Q6P9A3 IRF5P1-201ENST00000504852 2164 ntBASIC4.75□□□□□ -1.65
ZNF549Q6P9A3 NAIP-210ENST00000523981 4543 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
ZNF549Q6P9A3 CKAP5-210ENST00000529230 7121 ntAPPRIS P1 TSL 5 BASIC4.75□□□□□ -1.65
ZNF549Q6P9A3 HSPD1P11-201ENST00000508643 1702 ntBASIC4.75□□□□□ -1.65
ZNF549Q6P9A3 GNGT1-201ENST00000248572 720 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
ZNF549Q6P9A3 OR4P4-201ENST00000314612 939 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
ZNF549Q6P9A3 IKZF3-202ENST00000346243 1296 ntTSL 5 BASIC4.75□□□□□ -1.65
ZNF549Q6P9A3 KLRF1-202ENST00000354855 838 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
ZNF549Q6P9A3 RNA5SP507-201ENST00000363603 121 ntBASIC4.75□□□□□ -1.65
ZNF549Q6P9A3 SNORD116-12-201ENST00000384468 92 ntBASIC4.75□□□□□ -1.65
ZNF549Q6P9A3 AP000580.1-201ENST00000404439 358 ntBASIC4.75□□□□□ -1.65
ZNF549Q6P9A3 MRM2-202ENST00000407040 582 ntTSL 3 BASIC4.75□□□□□ -1.65
ZNF549Q6P9A3 GLS-204ENST00000409428 816 ntTSL 2 BASIC4.75□□□□□ -1.65
ZNF549Q6P9A3 Y_RNA.599-201ENST00000410489 109 ntBASIC4.75□□□□□ -1.65
ZNF549Q6P9A3 AL035604.1-201ENST00000416481 531 ntTSL 3 BASIC4.75□□□□□ -1.65
ZNF549Q6P9A3 LINC00993-201ENST00000420453 540 ntBASIC4.75□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 96.6 ms