Protein–RNA interactions for Protein: Q16787

LAMA3, Laminin subunit alpha-3, humanhuman

Predictions only

Length 3,333 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA3Q16787 RPL9-201ENST00000295955 750 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
LAMA3Q16787 Z97055.1-201ENST00000419730 712 ntBASIC4.1□□□□□ -1.75
LAMA3Q16787 AL158071.1-201ENST00000430315 461 ntBASIC4.1□□□□□ -1.75
LAMA3Q16787 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC4.1□□□□□ -1.75
LAMA3Q16787 IGKV1OR-3-201ENST00000446944 348 ntBASIC4.1□□□□□ -1.75
LAMA3Q16787 RPL32P34-201ENST00000486380 400 ntBASIC4.1□□□□□ -1.75
LAMA3Q16787 AC023141.12-201ENST00000512399 199 ntBASIC4.1□□□□□ -1.75
LAMA3Q16787 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC4.1□□□□□ -1.75
LAMA3Q16787 RNU2-27P-201ENST00000516185 142 ntBASIC4.1□□□□□ -1.75
LAMA3Q16787 AC087362.1-201ENST00000527912 434 ntTSL 5 BASIC4.1□□□□□ -1.75
LAMA3Q16787 AC133552.5-201ENST00000604266 540 ntBASIC4.1□□□□□ -1.75
LAMA3Q16787 AC079684.1-201ENST00000621405 437 ntBASIC4.1□□□□□ -1.75
LAMA3Q16787 RIMS1-212ENST00000517827 3065 ntTSL 2 BASIC4.1□□□□□ -1.75
LAMA3Q16787 NHLRC2-201ENST00000369301 11051 ntAPPRIS P1 TSL 2 BASIC4.1□□□□□ -1.75
LAMA3Q16787 AL365440.1-201ENST00000436135 2167 ntBASIC4.1□□□□□ -1.75
LAMA3Q16787 MDM4-217ENST00000621032 5592 ntTSL 2 BASIC4.1□□□□□ -1.75
LAMA3Q16787 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
LAMA3Q16787 NOS1-201ENST00000317775 12158 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
LAMA3Q16787 RAD17-203ENST00000345306 2789 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
LAMA3Q16787 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
LAMA3Q16787 EPB41L2-226ENST00000530757 4360 ntTSL 2 BASIC4.1□□□□□ -1.75
LAMA3Q16787 TAF9BP1-201ENST00000396646 746 ntBASIC4.1□□□□□ -1.75
LAMA3Q16787 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC4.1□□□□□ -1.75
LAMA3Q16787 AC009303.3-201ENST00000591103 736 ntBASIC4.1□□□□□ -1.75
LAMA3Q16787 ZNF37A-202ENST00000361085 8738 ntAPPRIS P1 TSL 2 BASIC4.1□□□□□ -1.75
LAMA3Q16787 ALMS1-206ENST00000613296 12925 ntAPPRIS P2 TSL 1 (best) BASIC4.09□□□□□ -1.75
LAMA3Q16787 COLCA1-205ENST00000620864 8098 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
LAMA3Q16787 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
LAMA3Q16787 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC4.09□□□□□ -1.75
LAMA3Q16787 SNX18P3-202ENST00000565670 1750 ntBASIC4.09□□□□□ -1.75
LAMA3Q16787 USP37-201ENST00000258399 8032 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
LAMA3Q16787 SLC4A8-203ENST00000453097 11824 ntAPPRIS P3 TSL 1 (best) BASIC4.09□□□□□ -1.75
LAMA3Q16787 ITSN2-213ENST00000622089 5805 ntTSL 5 BASIC4.09□□□□□ -1.75
LAMA3Q16787 AL592182.3-201ENST00000642132 3304 ntBASIC4.09□□□□□ -1.75
LAMA3Q16787 CEP250-202ENST00000397527 15703 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.75
LAMA3Q16787 MLLT3-201ENST00000380321 708 ntTSL 3 BASIC4.09□□□□□ -1.75
LAMA3Q16787 AL078604.1-201ENST00000404609 466 ntBASIC4.09□□□□□ -1.75
LAMA3Q16787 LINC00376-201ENST00000439454 693 ntTSL 5 BASIC4.09□□□□□ -1.75
LAMA3Q16787 HMGB3P9-201ENST00000441799 583 ntBASIC4.09□□□□□ -1.75
LAMA3Q16787 LINC01921-201ENST00000456163 393 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
LAMA3Q16787 AL080313.2-201ENST00000456440 489 ntTSL 3 BASIC4.09□□□□□ -1.75
LAMA3Q16787 SNORD105B-201ENST00000458770 79 ntBASIC4.09□□□□□ -1.75
LAMA3Q16787 RNU7-143P-201ENST00000516781 65 ntBASIC4.09□□□□□ -1.75
LAMA3Q16787 AL390838.2-201ENST00000602394 274 ntBASIC4.09□□□□□ -1.75
LAMA3Q16787 AC005520.3-201ENST00000602874 370 ntBASIC4.09□□□□□ -1.75
LAMA3Q16787 IMMP1LP1-201ENST00000605170 488 ntBASIC4.09□□□□□ -1.75
LAMA3Q16787 AC091905.2-201ENST00000623143 306 ntBASIC4.09□□□□□ -1.75
LAMA3Q16787 UGGT1-201ENST00000259253 10650 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
LAMA3Q16787 HSPA8P17-201ENST00000427029 1382 ntBASIC4.09□□□□□ -1.75
LAMA3Q16787 ECM2-202ENST00000375540 1606 ntTSL 2 BASIC4.09□□□□□ -1.75
LAMA3Q16787 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC4.09□□□□□ -1.75
LAMA3Q16787 CPD-202ENST00000543464 4007 ntTSL 2 BASIC4.09□□□□□ -1.75
LAMA3Q16787 AC007823.1-201ENST00000569932 1566 ntBASIC4.09□□□□□ -1.75
LAMA3Q16787 EI24P3-201ENST00000399046 1062 ntBASIC4.09□□□□□ -1.76
LAMA3Q16787 C21orf91-OT1-202ENST00000430815 717 ntTSL 5 BASIC4.09□□□□□ -1.76
LAMA3Q16787 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC4.09□□□□□ -1.76
LAMA3Q16787 HMGB1P21-201ENST00000502313 581 ntBASIC4.09□□□□□ -1.76
LAMA3Q16787 AC011601.1-201ENST00000549710 577 ntTSL 3 BASIC4.09□□□□□ -1.76
LAMA3Q16787 LIN7C-202ENST00000524596 4290 ntTSL 1 (best) BASIC4.09□□□□□ -1.76
LAMA3Q16787 POLQ-204ENST00000621776 9055 ntTSL 5 BASIC4.09□□□□□ -1.76
LAMA3Q16787 ZSCAN26-204ENST00000614088 2321 ntTSL 3 BASIC4.09□□□□□ -1.76
LAMA3Q16787 ADGRL3-217ENST00000514591 6297 ntAPPRIS P2 TSL 5 BASIC4.09□□□□□ -1.76
LAMA3Q16787 OR4K13-201ENST00000315693 915 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
LAMA3Q16787 AL391645.1-201ENST00000417409 506 ntTSL 3 BASIC4.08□□□□□ -1.76
LAMA3Q16787 AC099509.1-201ENST00000502437 652 ntTSL 2 BASIC4.08□□□□□ -1.76
LAMA3Q16787 SOX9-AS1-211ENST00000533179 460 ntTSL 3 BASIC4.08□□□□□ -1.76
LAMA3Q16787 DEFB109F-202ENST00000542600 509 ntTSL 2 BASIC4.08□□□□□ -1.76
LAMA3Q16787 LAMTOR5-AS1-217ENST00000608152 407 ntTSL 5 BASIC4.08□□□□□ -1.76
LAMA3Q16787 LAMTOR5-AS1-227ENST00000609653 457 ntTSL 2 BASIC4.08□□□□□ -1.76
LAMA3Q16787 AP005264.7-201ENST00000625003 745 ntBASIC4.08□□□□□ -1.76
LAMA3Q16787 CD69-201ENST00000228434 1676 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
LAMA3Q16787 OR2A5-202ENST00000641693 8681 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
LAMA3Q16787 BTBD10P1-201ENST00000549824 1352 ntBASIC4.08□□□□□ -1.76
LAMA3Q16787 ZBTB8B-201ENST00000609129 12834 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
LAMA3Q16787 POLR2B-203ENST00000431623 3666 ntTSL 2 BASIC4.08□□□□□ -1.76
LAMA3Q16787 GPBP1-204ENST00000506184 2857 ntAPPRIS P3 TSL 1 (best) BASIC4.08□□□□□ -1.76
LAMA3Q16787 FAM26D-202ENST00000368597 1311 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
LAMA3Q16787 CLK1-203ENST00000409769 1192 ntTSL 2 BASIC4.08□□□□□ -1.76
LAMA3Q16787 RPL21P10-201ENST00000463521 490 ntBASIC4.08□□□□□ -1.76
LAMA3Q16787 PTGES3P3-201ENST00000511479 482 ntBASIC4.08□□□□□ -1.76
LAMA3Q16787 AC103843.2-201ENST00000530523 682 ntBASIC4.08□□□□□ -1.76
LAMA3Q16787 AC007066.2-202ENST00000566531 914 ntBASIC4.08□□□□□ -1.76
LAMA3Q16787 FRG1EP-201ENST00000634469 770 ntBASIC4.08□□□□□ -1.76
LAMA3Q16787 FAM26E-201ENST00000368599 9784 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
LAMA3Q16787 USP47-203ENST00000399455 7396 ntAPPRIS ALT2 TSL 5 BASIC4.08□□□□□ -1.76
LAMA3Q16787 CCDC169-204ENST00000379864 5944 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
LAMA3Q16787 TRPS1-203ENST00000395715 9990 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
LAMA3Q16787 ZRANB3-210ENST00000536680 6943 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
LAMA3Q16787 PCA3_2.1-201ENST00000612507 409 ntBASIC4.08□□□□□ -1.76
LAMA3Q16787 AC138907.10-201ENST00000623708 983 ntBASIC4.08□□□□□ -1.76
LAMA3Q16787 AL392088.2-201ENST00000637607 285 ntBASIC4.08□□□□□ -1.76
LAMA3Q16787 DENND2C-201ENST00000393274 6163 ntTSL 5 BASIC4.07□□□□□ -1.76
LAMA3Q16787 AC007953.1-201ENST00000450500 560 ntTSL 4 BASIC4.07□□□□□ -1.76
LAMA3Q16787 RAD23BP3-201ENST00000454157 1152 ntBASIC4.07□□□□□ -1.76
LAMA3Q16787 AC006511.1-201ENST00000470614 315 ntBASIC4.07□□□□□ -1.76
LAMA3Q16787 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC4.07□□□□□ -1.76
LAMA3Q16787 AL606834.2-201ENST00000602954 668 ntBASIC4.07□□□□□ -1.76
LAMA3Q16787 AHNAK2-201ENST00000333244 18254 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
LAMA3Q16787 CASC17-201ENST00000569074 2059 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
LAMA3Q16787 SUPT16HP1-201ENST00000537175 3133 ntBASIC4.07□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 84.4 ms