Protein–RNA interactions for Protein: P55318

FOXA3, Hepatocyte nuclear factor 3-gamma, humanhuman

Predicted RBP Predictions only

Length 350 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA3P55318 CHEK2P5-201ENST00000423877 246 ntBASIC3.08□□□□□ -1.92
FOXA3P55318 AL359853.3-201ENST00000423879 544 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
FOXA3P55318 LBX1-AS1-202ENST00000434878 418 ntTSL 5 BASIC3.08□□□□□ -1.92
FOXA3P55318 AL162726.1-201ENST00000436084 455 ntTSL 3 BASIC3.08□□□□□ -1.92
FOXA3P55318 LIX1L-AS1-205ENST00000437797 536 ntTSL 3 BASIC3.08□□□□□ -1.92
FOXA3P55318 AC068491.2-201ENST00000438897 617 ntTSL 2 BASIC3.08□□□□□ -1.92
FOXA3P55318 AL500522.2-201ENST00000448562 343 ntBASIC3.08□□□□□ -1.92
FOXA3P55318 AL162591.2-201ENST00000449634 317 ntBASIC3.08□□□□□ -1.92
FOXA3P55318 ANP32BP2-201ENST00000454525 545 ntBASIC3.08□□□□□ -1.92
FOXA3P55318 DHFRP3-201ENST00000455595 559 ntBASIC3.08□□□□□ -1.92
FOXA3P55318 TRBV8-1-201ENST00000481590 279 ntBASIC3.08□□□□□ -1.92
FOXA3P55318 AC097372.3-201ENST00000503593 522 ntTSL 3 BASIC3.08□□□□□ -1.92
FOXA3P55318 ZCCHC10-210ENST00000513848 876 ntAPPRIS ALT2 TSL 2 BASIC3.08□□□□□ -1.92
FOXA3P55318 AC093305.1-201ENST00000514105 522 ntTSL 5 BASIC3.08□□□□□ -1.92
FOXA3P55318 AC087672.2-201ENST00000522498 429 ntTSL 2 BASIC3.08□□□□□ -1.92
FOXA3P55318 AC105031.3-201ENST00000524359 616 ntTSL 3 BASIC3.08□□□□□ -1.92
FOXA3P55318 AL356215.1-201ENST00000528366 1102 ntTSL 2 BASIC3.08□□□□□ -1.92
FOXA3P55318 TEX12-202ENST00000530752 787 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
FOXA3P55318 OR5AN2P-201ENST00000534535 896 ntBASIC3.08□□□□□ -1.92
FOXA3P55318 AC009803.1-202ENST00000551940 544 ntTSL 4 BASIC3.08□□□□□ -1.92
FOXA3P55318 GNRHR2P1-201ENST00000555315 631 ntBASIC3.08□□□□□ -1.92
FOXA3P55318 AC091073.1-201ENST00000559620 666 ntTSL 3 BASIC3.08□□□□□ -1.92
FOXA3P55318 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC3.08□□□□□ -1.92
FOXA3P55318 MIR3667-201ENST00000581025 74 ntBASIC3.08□□□□□ -1.92
FOXA3P55318 VN1R84P-201ENST00000593697 235 ntBASIC3.08□□□□□ -1.92
FOXA3P55318 AC244505.7-201ENST00000599675 272 ntBASIC3.08□□□□□ -1.92
FOXA3P55318 EIF1P6-201ENST00000600054 334 ntBASIC3.08□□□□□ -1.92
FOXA3P55318 MTRNR2L12-201ENST00000600213 1049 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
FOXA3P55318 AL031320.1-201ENST00000604177 357 ntBASIC3.08□□□□□ -1.92
FOXA3P55318 AL049844.2-201ENST00000604280 628 ntBASIC3.08□□□□□ -1.92
FOXA3P55318 AL133243.1-201ENST00000614487 366 ntBASIC3.08□□□□□ -1.92
FOXA3P55318 AC243585.1-201ENST00000617867 607 ntTSL 3 BASIC3.08□□□□□ -1.92
FOXA3P55318 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC3.08□□□□□ -1.92
FOXA3P55318 CFTRP2-201ENST00000634304 199 ntBASIC3.08□□□□□ -1.92
FOXA3P55318 OR5T1-201ENST00000641368 1118 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
FOXA3P55318 DAZ4-206ENST00000449750 3271 ntTSL 5 BASIC3.08□□□□□ -1.92
FOXA3P55318 AC025031.4-201ENST00000621248 3271 ntBASIC3.08□□□□□ -1.92
FOXA3P55318 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC3.08□□□□□ -1.92
FOXA3P55318 RPS4XP5-202ENST00000449995 1334 ntBASIC3.08□□□□□ -1.92
FOXA3P55318 AC233968.1-201ENST00000611212 1300 ntBASIC3.08□□□□□ -1.92
FOXA3P55318 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
FOXA3P55318 ZNF705A-201ENST00000359286 3455 ntAPPRIS P1 TSL 2 BASIC3.08□□□□□ -1.92
FOXA3P55318 MTRNR2L13-201ENST00000604093 1445 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
FOXA3P55318 TCEANC-201ENST00000380600 2988 ntAPPRIS P1 TSL 3 BASIC3.08□□□□□ -1.92
FOXA3P55318 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC3.08□□□□□ -1.92
FOXA3P55318 C9orf72-203ENST00000380003 3200 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
FOXA3P55318 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
FOXA3P55318 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
FOXA3P55318 ERCC6-202ENST00000374127 1782 ntBASIC3.07□□□□□ -1.92
FOXA3P55318 LINC02393-202ENST00000614177 1993 ntTSL 2 BASIC3.07□□□□□ -1.92
FOXA3P55318 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC3.07□□□□□ -1.92
FOXA3P55318 LINC02085-201ENST00000465215 2051 ntTSL 2 BASIC3.07□□□□□ -1.92
FOXA3P55318 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
FOXA3P55318 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
FOXA3P55318 AL139811.1-201ENST00000424779 2299 ntBASIC3.07□□□□□ -1.92
FOXA3P55318 AC008033.1-201ENST00000216407 1162 ntBASIC3.07□□□□□ -1.92
FOXA3P55318 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC3.07□□□□□ -1.92
FOXA3P55318 SNORA51.8-201ENST00000384234 132 ntBASIC3.07□□□□□ -1.92
FOXA3P55318 TRAV21-201ENST00000390449 343 ntAPPRIS P1 BASIC3.07□□□□□ -1.92
FOXA3P55318 AC097717.1-233ENST00000413557 460 ntTSL 3 BASIC3.07□□□□□ -1.92
FOXA3P55318 COX6B1P1-201ENST00000415962 213 ntBASIC3.07□□□□□ -1.92
FOXA3P55318 TPTE2P1-203ENST00000434100 514 ntTSL 3 BASIC3.07□□□□□ -1.92
FOXA3P55318 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC3.07□□□□□ -1.92
FOXA3P55318 C4orf26-202ENST00000435974 560 ntTSL 2 BASIC3.07□□□□□ -1.92
FOXA3P55318 C21orf91-OT1-203ENST00000439392 497 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
FOXA3P55318 KRTAP8-2P-201ENST00000440620 186 ntBASIC3.07□□□□□ -1.92
FOXA3P55318 SERPINA7P1-201ENST00000443077 631 ntBASIC3.07□□□□□ -1.92
FOXA3P55318 AC013460.1-205ENST00000450695 518 ntTSL 4 BASIC3.07□□□□□ -1.92
FOXA3P55318 RPL36AP13-201ENST00000457490 317 ntBASIC3.07□□□□□ -1.92
FOXA3P55318 AL512303.1-201ENST00000458693 465 ntTSL 3 BASIC3.07□□□□□ -1.92
FOXA3P55318 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC3.07□□□□□ -1.92
FOXA3P55318 RPS23P1-201ENST00000491662 432 ntBASIC3.07□□□□□ -1.92
FOXA3P55318 RN7SL101P-201ENST00000496350 279 ntBASIC3.07□□□□□ -1.92
FOXA3P55318 LINC02430-201ENST00000504755 476 ntTSL 3 BASIC3.07□□□□□ -1.92
FOXA3P55318 AP003472.1-201ENST00000519844 644 ntTSL 3 BASIC3.07□□□□□ -1.92
FOXA3P55318 IGKV3D-34-201ENST00000522638 302 ntBASIC3.07□□□□□ -1.92
FOXA3P55318 MTND1P6-201ENST00000523621 946 ntBASIC3.07□□□□□ -1.92
FOXA3P55318 AC011853.2-201ENST00000526901 774 ntTSL 5 BASIC3.07□□□□□ -1.92
FOXA3P55318 AP001781.1-201ENST00000530977 207 ntBASIC3.07□□□□□ -1.92
FOXA3P55318 AC007225.2-201ENST00000562529 256 ntBASIC3.07□□□□□ -1.92
FOXA3P55318 MIR4489-201ENST00000578869 62 ntBASIC3.07□□□□□ -1.92
FOXA3P55318 AL034351.1-201ENST00000605288 668 ntBASIC3.07□□□□□ -1.92
FOXA3P55318 LINC00649-214ENST00000609132 668 ntTSL 5 BASIC3.07□□□□□ -1.92
FOXA3P55318 AL355512.1-201ENST00000609514 488 ntTSL 5 BASIC3.07□□□□□ -1.92
FOXA3P55318 AL121612.2-201ENST00000612261 482 ntBASIC3.07□□□□□ -1.92
FOXA3P55318 C2orf27A-204ENST00000623058 969 ntBASIC3.07□□□□□ -1.92
FOXA3P55318 NRXN1-223ENST00000625891 1164 ntTSL 4 BASIC3.07□□□□□ -1.92
FOXA3P55318 ACADM-203ENST00000420607 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC3.07□□□□□ -1.92
FOXA3P55318 LINC01566-202ENST00000569242 2801 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
FOXA3P55318 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC3.07□□□□□ -1.92
FOXA3P55318 VIP-202ENST00000367244 1584 ntAPPRIS P4 TSL 1 (best) BASIC3.07□□□□□ -1.92
FOXA3P55318 AC007491.1-202ENST00000637961 1576 ntTSL 5 BASIC3.07□□□□□ -1.92
FOXA3P55318 EED-203ENST00000351625 1696 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
FOXA3P55318 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
FOXA3P55318 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC3.06□□□□□ -1.92
FOXA3P55318 RNU1-87P-201ENST00000363727 170 ntBASIC3.06□□□□□ -1.92
FOXA3P55318 LRRC39-203ENST00000370138 1466 ntTSL 5 BASIC3.06□□□□□ -1.92
FOXA3P55318 ZNF765-201ENST00000396408 4569 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
FOXA3P55318 AL590763.1-201ENST00000398297 1545 ntBASIC3.06□□□□□ -1.92
FOXA3P55318 RNU4-34P-201ENST00000410431 124 ntBASIC3.06□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 78 ms