Protein–RNA interactions for Protein: P55072

VCP, Transitional endoplasmic reticulum ATPase, humanhuman

Known RBP Predictions only

Length 806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCPP55072 OR56A3-205ENST00000641905 4595 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
VCPP55072 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC4.83□□□□□ -1.64
VCPP55072 ABI3BP-215ENST00000495063 3714 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
VCPP55072 OR14L1P-202ENST00000641545 3009 ntBASIC4.83□□□□□ -1.64
VCPP55072 AL138828.1-203ENST00000419926 1570 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
VCPP55072 OR2L3-203ENST00000641649 2846 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
VCPP55072 EMSY-207ENST00000525919 4074 ntAPPRIS ALT1 TSL 1 (best) BASIC4.82□□□□□ -1.64
VCPP55072 KMO-204ENST00000366559 5261 ntAPPRIS P2 TSL 1 (best) BASIC4.82□□□□□ -1.64
VCPP55072 ANK3-202ENST00000355288 3811 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
VCPP55072 AC010132.3-201ENST00000442788 2430 ntAPPRIS P5 TSL 5 BASIC4.82□□□□□ -1.64
VCPP55072 OR4E2-202ENST00000641524 2855 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
VCPP55072 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
VCPP55072 CEP192-203ENST00000506447 7960 ntAPPRIS P2 TSL 5 BASIC4.82□□□□□ -1.64
VCPP55072 CFHR1-201ENST00000320493 1271 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
VCPP55072 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC4.82□□□□□ -1.64
VCPP55072 RNU6ATAC5P-201ENST00000388104 126 ntBASIC4.82□□□□□ -1.64
VCPP55072 RNA5SP372-201ENST00000390836 115 ntBASIC4.82□□□□□ -1.64
VCPP55072 AL607077.1-201ENST00000401718 499 ntBASIC4.82□□□□□ -1.64
VCPP55072 RN7SKP267-201ENST00000410381 285 ntBASIC4.82□□□□□ -1.64
VCPP55072 VDAC1P9-201ENST00000412766 841 ntBASIC4.82□□□□□ -1.64
VCPP55072 AC011933.1-201ENST00000413334 321 ntBASIC4.82□□□□□ -1.64
VCPP55072 RPL6P29-201ENST00000414863 865 ntBASIC4.82□□□□□ -1.64
VCPP55072 ZNF92P1Y-201ENST00000415010 1191 ntBASIC4.82□□□□□ -1.64
VCPP55072 TRIM60P17-201ENST00000415181 719 ntBASIC4.82□□□□□ -1.64
VCPP55072 AC093158.1-201ENST00000415549 791 ntTSL 3 BASIC4.82□□□□□ -1.64
VCPP55072 AC012368.2-201ENST00000423539 560 ntTSL 3 BASIC4.82□□□□□ -1.64
VCPP55072 RPS20P1-201ENST00000434853 354 ntBASIC4.82□□□□□ -1.64
VCPP55072 ELOCP10-201ENST00000440624 327 ntBASIC4.82□□□□□ -1.64
VCPP55072 H2AFZP5-201ENST00000446960 382 ntBASIC4.82□□□□□ -1.64
VCPP55072 AL391427.1-201ENST00000451575 425 ntTSL 3 BASIC4.82□□□□□ -1.64
VCPP55072 CALM1P2-201ENST00000452941 448 ntBASIC4.82□□□□□ -1.64
VCPP55072 RNU6ATAC28P-201ENST00000459249 118 ntBASIC4.82□□□□□ -1.64
VCPP55072 AC116533.1-201ENST00000459748 321 ntBASIC4.82□□□□□ -1.64
VCPP55072 ATP5G1P3-201ENST00000463301 410 ntBASIC4.82□□□□□ -1.64
VCPP55072 RPS7P7-201ENST00000463499 571 ntBASIC4.82□□□□□ -1.64
VCPP55072 AC090142.1-201ENST00000465776 462 ntBASIC4.82□□□□□ -1.64
VCPP55072 MTND4LP2-201ENST00000502312 285 ntBASIC4.82□□□□□ -1.64
VCPP55072 PTPN20-213ENST00000502705 854 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
VCPP55072 LINC00500-201ENST00000515860 539 ntTSL 4 BASIC4.82□□□□□ -1.64
VCPP55072 AC010476.1-201ENST00000519111 851 ntBASIC4.82□□□□□ -1.64
VCPP55072 PAFAH1B2-206ENST00000530272 850 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
VCPP55072 AC009268.1-201ENST00000561352 1203 ntBASIC4.82□□□□□ -1.64
VCPP55072 ZNF540-204ENST00000586792 564 ntTSL 3 BASIC4.82□□□□□ -1.64
VCPP55072 AP001120.2-201ENST00000589395 296 ntTSL 3 BASIC4.82□□□□□ -1.64
VCPP55072 ELOCP34-201ENST00000604436 327 ntBASIC4.82□□□□□ -1.64
VCPP55072 AL161756.2-201ENST00000604597 246 ntBASIC4.82□□□□□ -1.64
VCPP55072 AC091979.2-201ENST00000607514 214 ntBASIC4.82□□□□□ -1.64
VCPP55072 AC079298.2-201ENST00000623885 459 ntBASIC4.82□□□□□ -1.64
VCPP55072 GRIK2-204ENST00000369137 4272 ntTSL 5 BASIC4.82□□□□□ -1.64
VCPP55072 CENPE-202ENST00000380026 8241 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
VCPP55072 AL451142.2-201ENST00000429076 2090 ntBASIC4.82□□□□□ -1.64
VCPP55072 AC092079.1-201ENST00000558620 1985 ntBASIC4.82□□□□□ -1.64
VCPP55072 DEPDC1-202ENST00000456315 5331 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
VCPP55072 AC007342.7-201ENST00000624610 2337 ntBASIC4.81□□□□□ -1.64
VCPP55072 AC092435.4-201ENST00000623012 4159 ntBASIC4.81□□□□□ -1.64
VCPP55072 C2CD6-204ENST00000450242 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
VCPP55072 AC090017.1-201ENST00000548612 1779 ntBASIC4.81□□□□□ -1.64
VCPP55072 ELAVL4-203ENST00000371821 3349 ntTSL 5 BASIC4.81□□□□□ -1.64
VCPP55072 ADNP-201ENST00000349014 5963 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
VCPP55072 SUPT3H-202ENST00000371459 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
VCPP55072 IL6STP1-201ENST00000346911 1020 ntBASIC4.81□□□□□ -1.64
VCPP55072 RNU1-20P-201ENST00000363314 162 ntBASIC4.81□□□□□ -1.64
VCPP55072 5S_rRNA.1-201ENST00000364415 116 ntBASIC4.81□□□□□ -1.64
VCPP55072 C1orf105-203ENST00000367727 985 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
VCPP55072 AL022722.2-201ENST00000402519 180 ntBASIC4.81□□□□□ -1.64
VCPP55072 PPIAP31-201ENST00000405422 495 ntBASIC4.81□□□□□ -1.64
VCPP55072 RPL23AP26-201ENST00000412728 464 ntBASIC4.81□□□□□ -1.64
VCPP55072 AC104389.1-201ENST00000418080 522 ntTSL 3 BASIC4.81□□□□□ -1.64
VCPP55072 ARPP21-211ENST00000427542 568 ntTSL 4 BASIC4.81□□□□□ -1.64
VCPP55072 NDUFA5P1-201ENST00000433858 341 ntBASIC4.81□□□□□ -1.64
VCPP55072 AL392003.1-201ENST00000434394 243 ntBASIC4.81□□□□□ -1.64
VCPP55072 LINC00415-201ENST00000439079 435 ntTSL 3 BASIC4.81□□□□□ -1.64
VCPP55072 AC073587.1-201ENST00000447093 876 ntBASIC4.81□□□□□ -1.64
VCPP55072 AC017067.1-201ENST00000448570 447 ntTSL 5 BASIC4.81□□□□□ -1.64
VCPP55072 LINC01825-201ENST00000452381 850 ntTSL 3 BASIC4.81□□□□□ -1.64
VCPP55072 RPL31P53-201ENST00000457065 348 ntBASIC4.81□□□□□ -1.64
VCPP55072 EIF2S2P5-201ENST00000457635 968 ntBASIC4.81□□□□□ -1.64
VCPP55072 AC079910.1-201ENST00000477099 749 ntTSL 3 BASIC4.81□□□□□ -1.64
VCPP55072 DSTNP2-201ENST00000504533 515 ntBASIC4.81□□□□□ -1.64
VCPP55072 AC021146.3-201ENST00000511911 260 ntBASIC4.81□□□□□ -1.64
VCPP55072 RNA5SP446-201ENST00000515955 82 ntBASIC4.81□□□□□ -1.64
VCPP55072 RNA5SP360-201ENST00000516555 118 ntBASIC4.81□□□□□ -1.64
VCPP55072 IGHV3-63-201ENST00000518422 341 ntBASIC4.81□□□□□ -1.64
VCPP55072 AC009563.1-202ENST00000523365 643 ntTSL 3 BASIC4.81□□□□□ -1.64
VCPP55072 DYNLL1P4-201ENST00000549314 266 ntBASIC4.81□□□□□ -1.64
VCPP55072 PSMB7P1-201ENST00000556349 514 ntBASIC4.81□□□□□ -1.64
VCPP55072 AL355073.1-201ENST00000560296 517 ntTSL 4 BASIC4.81□□□□□ -1.64
VCPP55072 PWRN1-202ENST00000562501 642 ntTSL 3 BASIC4.81□□□□□ -1.64
VCPP55072 AC018552.3-201ENST00000567416 561 ntBASIC4.81□□□□□ -1.64
VCPP55072 AC123786.2-201ENST00000603459 275 ntBASIC4.81□□□□□ -1.64
VCPP55072 AC100814.1-201ENST00000606963 623 ntBASIC4.81□□□□□ -1.64
VCPP55072 AC243756.2-201ENST00000618406 463 ntBASIC4.81□□□□□ -1.64
VCPP55072 U3.53-201ENST00000628922 216 ntBASIC4.81□□□□□ -1.64
VCPP55072 AC064875.1-201ENST00000425974 1942 ntTSL 2 BASIC4.81□□□□□ -1.64
VCPP55072 CASC19-284ENST00000642142 1868 ntBASIC4.81□□□□□ -1.64
VCPP55072 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC4.81□□□□□ -1.64
VCPP55072 CTXN2-201ENST00000417307 2828 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
VCPP55072 RWDD2B-207ENST00000493196 3094 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
VCPP55072 MYOZ2-201ENST00000307128 2597 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
VCPP55072 RPS4Y1-201ENST00000250784 1305 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 85.9 ms