Protein–RNA interactions for Protein: P51587

BRCA2, Breast cancer type 2 susceptibility protein, humanhuman

Predictions only

Length 3,418 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2P51587 CACNA1C-220ENST00000399655 13433 ntAPPRIS ALT2 TSL 1 (best) BASIC4.19□□□□□ -1.74
BRCA2P51587 CDH19-201ENST00000262150 6341 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
BRCA2P51587 OR4K13-201ENST00000315693 915 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
BRCA2P51587 Z93403.1-201ENST00000411879 895 ntTSL 5 BASIC4.19□□□□□ -1.74
BRCA2P51587 DARS-AS1-206ENST00000446492 488 ntTSL 3 BASIC4.19□□□□□ -1.74
BRCA2P51587 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC4.19□□□□□ -1.74
BRCA2P51587 MIR5186-201ENST00000577504 120 ntBASIC4.19□□□□□ -1.74
BRCA2P51587 AL049844.2-201ENST00000604280 628 ntBASIC4.19□□□□□ -1.74
BRCA2P51587 AL354976.1-201ENST00000613843 387 ntBASIC4.19□□□□□ -1.74
BRCA2P51587 AC006386.2-201ENST00000624491 75 ntBASIC4.19□□□□□ -1.74
BRCA2P51587 AC012005.1-201ENST00000624575 75 ntBASIC4.19□□□□□ -1.74
BRCA2P51587 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC4.19□□□□□ -1.74
BRCA2P51587 NHS-205ENST00000617601 8163 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
BRCA2P51587 MARCH6-201ENST00000274140 9569 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
BRCA2P51587 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
BRCA2P51587 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC4.19□□□□□ -1.74
BRCA2P51587 AL138749.1-201ENST00000397864 791 ntTSL 5 BASIC4.19□□□□□ -1.74
BRCA2P51587 IGKV1OR-3-201ENST00000446944 348 ntBASIC4.19□□□□□ -1.74
BRCA2P51587 KC877373.1-201ENST00000479066 408 ntBASIC4.19□□□□□ -1.74
BRCA2P51587 HMGB1P21-201ENST00000502313 581 ntBASIC4.19□□□□□ -1.74
BRCA2P51587 AC069272.1-201ENST00000514843 680 ntTSL 3 BASIC4.19□□□□□ -1.74
BRCA2P51587 HSPA8P17-201ENST00000427029 1382 ntBASIC4.19□□□□□ -1.74
BRCA2P51587 MAPK10-372ENST00000641954 3413 ntBASIC4.19□□□□□ -1.74
BRCA2P51587 ASAH2-204ENST00000447815 2311 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
BRCA2P51587 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
BRCA2P51587 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC4.18□□□□□ -1.74
BRCA2P51587 RNA5SP249-201ENST00000516127 99 ntBASIC4.18□□□□□ -1.74
BRCA2P51587 AL392088.2-201ENST00000637607 285 ntBASIC4.18□□□□□ -1.74
BRCA2P51587 LTN1-202ENST00000389194 7749 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
BRCA2P51587 ZNF605-202ENST00000360187 9340 ntAPPRIS P3 TSL 1 (best) BASIC4.18□□□□□ -1.74
BRCA2P51587 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC4.18□□□□□ -1.74
BRCA2P51587 GIGYF2-246ENST00000629305 7878 ntTSL 5 BASIC4.18□□□□□ -1.74
BRCA2P51587 LINC01222-201ENST00000427439 1785 ntTSL 2 BASIC4.18□□□□□ -1.74
BRCA2P51587 ATP2C1-210ENST00000505330 4888 ntAPPRIS ALT2 TSL 2 BASIC4.18□□□□□ -1.74
BRCA2P51587 AC007656.2-201ENST00000624902 4547 ntBASIC4.18□□□□□ -1.74
BRCA2P51587 CRP-203ENST00000368111 512 ntTSL 3 BASIC4.18□□□□□ -1.74
BRCA2P51587 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC4.18□□□□□ -1.74
BRCA2P51587 RPL7P59-201ENST00000447700 943 ntBASIC4.18□□□□□ -1.74
BRCA2P51587 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC4.18□□□□□ -1.74
BRCA2P51587 RNU2-27P-201ENST00000516185 142 ntBASIC4.18□□□□□ -1.74
BRCA2P51587 A2ML1-AS1-201ENST00000537288 452 ntTSL 3 BASIC4.18□□□□□ -1.74
BRCA2P51587 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC4.18□□□□□ -1.74
BRCA2P51587 AC007599.1-201ENST00000568688 1174 ntBASIC4.18□□□□□ -1.74
BRCA2P51587 AC079298.3-201ENST00000624941 977 ntTSL 3 BASIC4.18□□□□□ -1.74
BRCA2P51587 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC4.18□□□□□ -1.74
BRCA2P51587 NR3C2-202ENST00000344721 5712 ntAPPRIS P1 TSL 5 BASIC4.18□□□□□ -1.74
BRCA2P51587 AC123769.2-201ENST00000624332 5984 ntBASIC4.18□□□□□ -1.74
BRCA2P51587 WDR35-201ENST00000281405 6918 ntAPPRIS P3 TSL 1 (best) BASIC4.18□□□□□ -1.74
BRCA2P51587 MR1-208ENST00000614012 7860 ntAPPRIS P1 TSL 5 BASIC4.18□□□□□ -1.74
BRCA2P51587 AL451127.1-201ENST00000422909 624 ntTSL 3 BASIC4.18□□□□□ -1.74
BRCA2P51587 RPL21P110-201ENST00000433345 446 ntBASIC4.18□□□□□ -1.74
BRCA2P51587 LINC00376-201ENST00000439454 693 ntTSL 5 BASIC4.18□□□□□ -1.74
BRCA2P51587 AC087362.1-201ENST00000527912 434 ntTSL 5 BASIC4.18□□□□□ -1.74
BRCA2P51587 TLN2-209ENST00000561311 11880 ntAPPRIS P1 TSL 5 BASIC4.18□□□□□ -1.74
BRCA2P51587 RPL23AP87-202ENST00000573039 466 ntBASIC4.18□□□□□ -1.74
BRCA2P51587 MIR4769-201ENST00000584126 77 ntBASIC4.18□□□□□ -1.74
BRCA2P51587 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC4.18□□□□□ -1.74
BRCA2P51587 ZRANB3-202ENST00000401392 6820 ntAPPRIS ALT2 TSL 1 (best) BASIC4.18□□□□□ -1.74
BRCA2P51587 LAMA2-201ENST00000421865 9640 ntAPPRIS P2 TSL 5 BASIC4.18□□□□□ -1.74
BRCA2P51587 MED12L-201ENST00000273432 6401 ntTSL 2 BASIC4.17□□□□□ -1.74
BRCA2P51587 PBRM1-202ENST00000337303 4825 ntAPPRIS ALT1 TSL 1 (best) BASIC4.17□□□□□ -1.74
BRCA2P51587 OR56A5-201ENST00000340110 738 ntBASIC4.17□□□□□ -1.74
BRCA2P51587 OR5V1-215ENST00000377154 1266 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
BRCA2P51587 RNA5SP306-201ENST00000411087 107 ntBASIC4.17□□□□□ -1.74
BRCA2P51587 RPS26P4-201ENST00000431743 355 ntBASIC4.17□□□□□ -1.74
BRCA2P51587 AC005019.1-201ENST00000436455 431 ntBASIC4.17□□□□□ -1.74
BRCA2P51587 AC124312.6-202ENST00000623624 418 ntBASIC4.17□□□□□ -1.74
BRCA2P51587 OR7C1-205ENST00000642030 11778 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
BRCA2P51587 LAMA2-206ENST00000618192 9687 ntAPPRIS ALT2 TSL 5 BASIC4.17□□□□□ -1.74
BRCA2P51587 AF131216.1-201ENST00000498997 5856 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
BRCA2P51587 LRRC63-203ENST00000595396 2327 ntAPPRIS P2 TSL 5 BASIC4.17□□□□□ -1.74
BRCA2P51587 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
BRCA2P51587 RPL5P18-201ENST00000406671 891 ntBASIC4.17□□□□□ -1.74
BRCA2P51587 FABP3P2-201ENST00000453169 399 ntBASIC4.17□□□□□ -1.74
BRCA2P51587 AC090993.1-201ENST00000522460 582 ntTSL 3 BASIC4.17□□□□□ -1.74
BRCA2P51587 AC011601.1-201ENST00000549710 577 ntTSL 3 BASIC4.17□□□□□ -1.74
BRCA2P51587 EIF5A2P1-201ENST00000564027 460 ntBASIC4.17□□□□□ -1.74
BRCA2P51587 ICE2-201ENST00000261520 7209 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
BRCA2P51587 PKIB-211ENST00000615438 1936 ntTSL 5 BASIC4.17□□□□□ -1.74
BRCA2P51587 PTPN3-203ENST00000412145 8765 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
BRCA2P51587 LINC02240-201ENST00000564199 1336 ntTSL 2 BASIC4.17□□□□□ -1.74
BRCA2P51587 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC4.17□□□□□ -1.74
BRCA2P51587 RNU4-35P-201ENST00000362588 141 ntBASIC4.17□□□□□ -1.74
BRCA2P51587 RNF19BPX-201ENST00000426224 625 ntBASIC4.17□□□□□ -1.74
BRCA2P51587 AC093157.1-204ENST00000454721 753 ntTSL 3 BASIC4.17□□□□□ -1.74
BRCA2P51587 AL080313.2-201ENST00000456440 489 ntTSL 3 BASIC4.17□□□□□ -1.74
BRCA2P51587 AC139783.2-201ENST00000504847 1145 ntBASIC4.17□□□□□ -1.74
BRCA2P51587 COX6B1P6-201ENST00000522347 255 ntBASIC4.17□□□□□ -1.74
BRCA2P51587 AL121576.1-201ENST00000556055 276 ntBASIC4.17□□□□□ -1.74
BRCA2P51587 AC093515.1-201ENST00000567103 445 ntTSL 5 BASIC4.17□□□□□ -1.74
BRCA2P51587 ANKRD31-203ENST00000506364 6207 ntAPPRIS ALT2 TSL 5 BASIC4.16□□□□□ -1.74
BRCA2P51587 PUS10-201ENST00000316752 2278 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
BRCA2P51587 FAM26E-201ENST00000368599 9784 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
BRCA2P51587 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC4.16□□□□□ -1.74
BRCA2P51587 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
BRCA2P51587 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
BRCA2P51587 GNG5P1-201ENST00000255500 204 ntBASIC4.16□□□□□ -1.74
BRCA2P51587 BX323014.1-201ENST00000412876 237 ntBASIC4.16□□□□□ -1.74
BRCA2P51587 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC4.16□□□□□ -1.74
BRCA2P51587 HMGB3P9-201ENST00000441799 583 ntBASIC4.16□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 135.6 ms