Protein–RNA interactions for Protein: P41273

TNFSF9, Tumor necrosis factor ligand superfamily member 9, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF9P41273 AC006272.2-201ENST00000594725 163 ntBASIC4.44□□□□□ -1.7
TNFSF9P41273 AC010615.3-201ENST00000597319 394 ntBASIC4.44□□□□□ -1.7
TNFSF9P41273 LINC00347-205ENST00000597518 868 ntTSL 5 BASIC4.44□□□□□ -1.7
TNFSF9P41273 OR7M1P-201ENST00000608946 533 ntBASIC4.44□□□□□ -1.7
TNFSF9P41273 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
TNFSF9P41273 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC4.44□□□□□ -1.7
TNFSF9P41273 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
TNFSF9P41273 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.44□□□□□ -1.7
TNFSF9P41273 CNTN5-212ENST00000619298 5734 ntTSL 5 BASIC4.44□□□□□ -1.7
TNFSF9P41273 GABRG2-217ENST00000639384 5360 ntTSL 5 BASIC4.43□□□□□ -1.7
TNFSF9P41273 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
TNFSF9P41273 AC027228.2-201ENST00000567141 2154 ntBASIC4.43□□□□□ -1.7
TNFSF9P41273 NFIB-210ENST00000543693 7622 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
TNFSF9P41273 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
TNFSF9P41273 NAMPT-202ENST00000354289 1213 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
TNFSF9P41273 RNU1-64P-201ENST00000365443 163 ntBASIC4.43□□□□□ -1.7
TNFSF9P41273 CTNNAL1-203ENST00000374594 824 ntTSL 3 BASIC4.43□□□□□ -1.7
TNFSF9P41273 RNA5SP296-201ENST00000410523 111 ntBASIC4.43□□□□□ -1.7
TNFSF9P41273 RNU4-6P-201ENST00000410804 122 ntBASIC4.43□□□□□ -1.7
TNFSF9P41273 AL590006.1-201ENST00000417390 752 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
TNFSF9P41273 LINC01889-201ENST00000430692 668 ntTSL 5 BASIC4.43□□□□□ -1.7
TNFSF9P41273 LBX1-AS1-202ENST00000434878 418 ntTSL 5 BASIC4.43□□□□□ -1.7
TNFSF9P41273 AL050338.1-201ENST00000445585 786 ntTSL 3 BASIC4.43□□□□□ -1.7
TNFSF9P41273 AL162151.2-201ENST00000448875 158 ntBASIC4.43□□□□□ -1.7
TNFSF9P41273 NPM1P39-201ENST00000449818 867 ntBASIC4.43□□□□□ -1.7
TNFSF9P41273 RPL5P32-201ENST00000454085 879 ntBASIC4.43□□□□□ -1.7
TNFSF9P41273 AL023584.2-201ENST00000454411 444 ntTSL 5 BASIC4.43□□□□□ -1.7
TNFSF9P41273 RPL36AP13-201ENST00000457490 317 ntBASIC4.43□□□□□ -1.7
TNFSF9P41273 RPL38P1-201ENST00000460914 211 ntBASIC4.43□□□□□ -1.7
TNFSF9P41273 AC109992.2-201ENST00000460977 765 ntTSL 3 BASIC4.43□□□□□ -1.7
TNFSF9P41273 ZIC4-AS1-201ENST00000462168 268 ntTSL 5 BASIC4.43□□□□□ -1.7
TNFSF9P41273 RPL7P1-201ENST00000468161 747 ntBASIC4.43□□□□□ -1.7
TNFSF9P41273 RPL7P9-201ENST00000468715 747 ntBASIC4.43□□□□□ -1.7
TNFSF9P41273 RPS26P28-201ENST00000470806 348 ntBASIC4.43□□□□□ -1.7
TNFSF9P41273 AL132838.2-201ENST00000492041 314 ntBASIC4.43□□□□□ -1.7
TNFSF9P41273 MTND1P6-201ENST00000523621 946 ntBASIC4.43□□□□□ -1.7
TNFSF9P41273 VNN2-207ENST00000525289 900 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
TNFSF9P41273 AC113192.1-201ENST00000527270 321 ntTSL 3 BASIC4.43□□□□□ -1.7
TNFSF9P41273 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC4.43□□□□□ -1.7
TNFSF9P41273 LINC01584-202ENST00000563990 852 ntTSL 3 BASIC4.43□□□□□ -1.7
TNFSF9P41273 CD24P2-201ENST00000565486 219 ntBASIC4.43□□□□□ -1.7
TNFSF9P41273 AC007599.1-201ENST00000568688 1174 ntBASIC4.43□□□□□ -1.7
TNFSF9P41273 AL121834.1-201ENST00000572284 509 ntBASIC4.43□□□□□ -1.7
TNFSF9P41273 EAF1-AS1-211ENST00000610011 316 ntTSL 5 BASIC4.43□□□□□ -1.7
TNFSF9P41273 AP005212.4-201ENST00000614206 710 ntBASIC4.43□□□□□ -1.7
TNFSF9P41273 AC245389.2-201ENST00000616023 576 ntBASIC4.43□□□□□ -1.7
TNFSF9P41273 AC242843.1-201ENST00000618702 573 ntBASIC4.43□□□□□ -1.7
TNFSF9P41273 MIR7702-201ENST00000621931 59 ntBASIC4.43□□□□□ -1.7
TNFSF9P41273 AP001005.3-201ENST00000622049 129 ntBASIC4.43□□□□□ -1.7
TNFSF9P41273 BX664718.1-201ENST00000439824 3224 ntTSL 2 BASIC4.43□□□□□ -1.7
TNFSF9P41273 FBXL13-207ENST00000455112 2274 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
TNFSF9P41273 VNN3-211ENST00000509351 1700 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
TNFSF9P41273 UGT2A3-201ENST00000251566 2965 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
TNFSF9P41273 GTDC1-203ENST00000392867 2408 ntTSL 5 BASIC4.43□□□□□ -1.7
TNFSF9P41273 MALRD1-204ENST00000454679 6880 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
TNFSF9P41273 DNAH8-205ENST00000449981 12940 ntTSL 5 BASIC4.43□□□□□ -1.7
TNFSF9P41273 LPAR4-205ENST00000614823 2155 ntAPPRIS P1 TSL 4 BASIC4.43□□□□□ -1.7
TNFSF9P41273 CDR1-201ENST00000370532 2467 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
TNFSF9P41273 GTDC1-202ENST00000344850 2607 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
TNFSF9P41273 CDKL3-209ENST00000523054 1775 ntTSL 2 BASIC4.42□□□□□ -1.7
TNFSF9P41273 ADGRL2-201ENST00000319517 5479 ntAPPRIS P2 TSL 1 (best) BASIC4.42□□□□□ -1.7
TNFSF9P41273 UNC13C-201ENST00000260323 12946 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
TNFSF9P41273 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
TNFSF9P41273 GKN2-201ENST00000328895 800 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
TNFSF9P41273 SLC30A7-201ENST00000357650 1281 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
TNFSF9P41273 RNA5SP513-201ENST00000364648 118 ntBASIC4.42□□□□□ -1.7
TNFSF9P41273 MIR134-201ENST00000385258 73 ntBASIC4.42□□□□□ -1.7
TNFSF9P41273 CD86-203ENST00000393627 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC4.42□□□□□ -1.7
TNFSF9P41273 PGBD4P8-201ENST00000412993 562 ntBASIC4.42□□□□□ -1.7
TNFSF9P41273 CR769775.2-201ENST00000417850 891 ntTSL 3 BASIC4.42□□□□□ -1.7
TNFSF9P41273 OR5BE1P-201ENST00000425977 939 ntBASIC4.42□□□□□ -1.7
TNFSF9P41273 AC099060.1-201ENST00000427806 448 ntTSL 3 BASIC4.42□□□□□ -1.7
TNFSF9P41273 AC023590.1-205ENST00000430457 676 ntTSL 3 BASIC4.42□□□□□ -1.7
TNFSF9P41273 ARHGEF7-AS1-201ENST00000435037 321 ntTSL 3 BASIC4.42□□□□□ -1.7
TNFSF9P41273 HSFY6P-201ENST00000445573 403 ntBASIC4.42□□□□□ -1.7
TNFSF9P41273 RPS11P1-201ENST00000451072 473 ntBASIC4.42□□□□□ -1.7
TNFSF9P41273 RAD23BP3-201ENST00000454157 1152 ntBASIC4.42□□□□□ -1.7
TNFSF9P41273 AC123768.1-201ENST00000486285 432 ntTSL 3 BASIC4.42□□□□□ -1.7
TNFSF9P41273 OR10J4-201ENST00000504970 935 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
TNFSF9P41273 HMGB1P23-201ENST00000518743 568 ntBASIC4.42□□□□□ -1.7
TNFSF9P41273 AC109635.6-201ENST00000525487 1113 ntBASIC4.42□□□□□ -1.7
TNFSF9P41273 LINC02422-201ENST00000535163 852 ntTSL 3 BASIC4.42□□□□□ -1.7
TNFSF9P41273 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC4.42□□□□□ -1.7
TNFSF9P41273 CYP4A43P-201ENST00000568156 121 ntBASIC4.42□□□□□ -1.7
TNFSF9P41273 AC079171.1-201ENST00000568788 914 ntBASIC4.42□□□□□ -1.7
TNFSF9P41273 MTND6P33-201ENST00000571794 183 ntBASIC4.42□□□□□ -1.7
TNFSF9P41273 AC006270.1-201ENST00000582889 478 ntTSL 3 BASIC4.42□□□□□ -1.7
TNFSF9P41273 AC110743.1-201ENST00000584870 478 ntBASIC4.42□□□□□ -1.7
TNFSF9P41273 AC096553.1-201ENST00000605169 829 ntBASIC4.42□□□□□ -1.7
TNFSF9P41273 GMCL1P2-201ENST00000605230 823 ntBASIC4.42□□□□□ -1.7
TNFSF9P41273 MIR6868-201ENST00000611215 58 ntBASIC4.42□□□□□ -1.7
TNFSF9P41273 LINC01358-205ENST00000625548 874 ntTSL 5 BASIC4.42□□□□□ -1.7
TNFSF9P41273 LINC02342-201ENST00000627910 461 ntTSL 5 BASIC4.42□□□□□ -1.7
TNFSF9P41273 OR5BE1P-202ENST00000641168 1176 ntBASIC4.42□□□□□ -1.7
TNFSF9P41273 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
TNFSF9P41273 UBE4A-203ENST00000545354 2149 ntTSL 2 BASIC4.42□□□□□ -1.7
TNFSF9P41273 MARK2P15-201ENST00000432204 2186 ntBASIC4.41□□□□□ -1.7
TNFSF9P41273 PANK1-203ENST00000342512 2703 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
TNFSF9P41273 ZNF285-205ENST00000614994 6012 ntAPPRIS P3 TSL 1 (best) BASIC4.41□□□□□ -1.7
TNFSF9P41273 SNORD35B-201ENST00000363660 87 ntBASIC4.41□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 123 ms