Protein–RNA interactions for Protein: P36941

LTBR, Tumor necrosis factor receptor superfamily member 3, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTBRP36941 OR55B1P-203ENST00000641518 2602 ntBASIC5.79□□□□□ -1.48
LTBRP36941 MKL2-202ENST00000571589 8799 ntAPPRIS ALT2 TSL 2 BASIC5.79□□□□□ -1.48
LTBRP36941 OPRM1-215ENST00000520708 1519 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
LTBRP36941 CDKL3-210ENST00000523832 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC5.79□□□□□ -1.48
LTBRP36941 MDM4-207ENST00000454264 9926 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
LTBRP36941 STK33-208ENST00000447869 3103 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
LTBRP36941 AL606516.1-201ENST00000455438 1861 ntTSL 2 BASIC5.79□□□□□ -1.48
LTBRP36941 PTBP3-202ENST00000334318 7990 ntAPPRIS ALT1 TSL 1 (best) BASIC5.79□□□□□ -1.48
LTBRP36941 LINC01619-203ENST00000549802 2169 ntTSL 2 BASIC5.79□□□□□ -1.48
LTBRP36941 AL034546.1-201ENST00000623740 3693 ntBASIC5.79□□□□□ -1.48
LTBRP36941 C2orf16-201ENST00000408964 6200 ntAPPRIS P2 BASIC5.79□□□□□ -1.48
LTBRP36941 Y_RNA.25-201ENST00000362528 102 ntBASIC5.79□□□□□ -1.48
LTBRP36941 RABGGTB-202ENST00000370826 512 ntTSL 2 BASIC5.79□□□□□ -1.48
LTBRP36941 OR1A2-201ENST00000381951 930 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
LTBRP36941 RNU6-259P-201ENST00000383999 107 ntBASIC5.79□□□□□ -1.48
LTBRP36941 CACNB4-203ENST00000397327 2112 ntTSL 5 BASIC5.79□□□□□ -1.48
LTBRP36941 MTCO3P31-201ENST00000405526 789 ntBASIC5.79□□□□□ -1.48
LTBRP36941 AL356967.1-201ENST00000406305 431 ntBASIC5.79□□□□□ -1.48
LTBRP36941 RN7SKP56-201ENST00000410513 331 ntBASIC5.79□□□□□ -1.48
LTBRP36941 RNU6-272P-201ENST00000411028 104 ntBASIC5.79□□□□□ -1.48
LTBRP36941 RPL21P32-201ENST00000419877 477 ntBASIC5.79□□□□□ -1.48
LTBRP36941 AL159174.1-202ENST00000425588 442 ntTSL 3 BASIC5.79□□□□□ -1.48
LTBRP36941 USP9YP9-201ENST00000429406 715 ntBASIC5.79□□□□□ -1.48
LTBRP36941 AC092598.1-201ENST00000431708 797 ntTSL 3 BASIC5.79□□□□□ -1.48
LTBRP36941 AL080316.1-201ENST00000432438 499 ntTSL 2 BASIC5.79□□□□□ -1.48
LTBRP36941 KCNIP1-205ENST00000434108 726 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
LTBRP36941 AL451136.1-201ENST00000435399 325 ntBASIC5.79□□□□□ -1.48
LTBRP36941 ZBTB40-IT1-201ENST00000438551 273 ntTSL 3 BASIC5.79□□□□□ -1.48
LTBRP36941 LINC00280-201ENST00000439525 448 ntTSL 2 BASIC5.79□□□□□ -1.48
LTBRP36941 RPS27AP15-201ENST00000447672 466 ntBASIC5.79□□□□□ -1.48
LTBRP36941 NPM1P39-201ENST00000449818 867 ntBASIC5.79□□□□□ -1.48
LTBRP36941 AL139081.1-201ENST00000452207 382 ntTSL 3 BASIC5.79□□□□□ -1.48
LTBRP36941 AL356289.2-201ENST00000455238 292 ntTSL 5 BASIC5.79□□□□□ -1.48
LTBRP36941 NDUFAF4P3-201ENST00000456468 525 ntBASIC5.79□□□□□ -1.48
LTBRP36941 TRAPPC2-204ENST00000458511 678 ntTSL 5 BASIC5.79□□□□□ -1.48
LTBRP36941 AC083795.2-201ENST00000510034 610 ntTSL 3 BASIC5.79□□□□□ -1.48
LTBRP36941 RN7SKP298-201ENST00000515950 94 ntBASIC5.79□□□□□ -1.48
LTBRP36941 AC084116.2-201ENST00000520171 415 ntTSL 4 BASIC5.79□□□□□ -1.48
LTBRP36941 HIGD1AP6-201ENST00000521833 279 ntBASIC5.79□□□□□ -1.48
LTBRP36941 AC025437.5-201ENST00000522769 314 ntTSL 3 BASIC5.79□□□□□ -1.48
LTBRP36941 AP003733.3-201ENST00000524942 788 ntTSL 2 BASIC5.79□□□□□ -1.48
LTBRP36941 RGS4-207ENST00000527809 817 ntTSL 4 BASIC5.79□□□□□ -1.48
LTBRP36941 AP002765.2-201ENST00000532961 666 ntTSL 3 BASIC5.79□□□□□ -1.48
LTBRP36941 AP002453.2-201ENST00000533503 320 ntBASIC5.79□□□□□ -1.48
LTBRP36941 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC5.79□□□□□ -1.48
LTBRP36941 MIR4528-201ENST00000577763 90 ntBASIC5.79□□□□□ -1.48
LTBRP36941 AC022211.1-201ENST00000579554 717 ntTSL 3 BASIC5.79□□□□□ -1.48
LTBRP36941 AP001004.1-201ENST00000582468 324 ntBASIC5.79□□□□□ -1.48
LTBRP36941 KPNA2P3-201ENST00000584190 848 ntBASIC5.79□□□□□ -1.48
LTBRP36941 AL121989.1-201ENST00000585888 746 ntTSL 3 BASIC5.79□□□□□ -1.48
LTBRP36941 ZNF540-204ENST00000586792 564 ntTSL 3 BASIC5.79□□□□□ -1.48
LTBRP36941 SATB1-AS1-207ENST00000593741 955 ntTSL 5 BASIC5.79□□□□□ -1.48
LTBRP36941 AL596327.1-201ENST00000603629 213 ntBASIC5.79□□□□□ -1.48
LTBRP36941 SEPT7P9-203ENST00000604116 343 ntBASIC5.79□□□□□ -1.48
LTBRP36941 AC005084.1-201ENST00000605160 304 ntBASIC5.79□□□□□ -1.48
LTBRP36941 MESTIT1_2.1-201ENST00000616328 235 ntBASIC5.79□□□□□ -1.48
LTBRP36941 AC005899.7-201ENST00000618199 588 ntBASIC5.79□□□□□ -1.48
LTBRP36941 AL008636.1-201ENST00000625038 1018 ntBASIC5.79□□□□□ -1.48
LTBRP36941 AL592430.2-201ENST00000633779 486 ntTSL 5 BASIC5.79□□□□□ -1.48
LTBRP36941 LINC01002-236ENST00000634022 378 ntTSL 5 BASIC5.79□□□□□ -1.48
LTBRP36941 ANKRD46-201ENST00000335659 2649 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
LTBRP36941 IFI16-203ENST00000359709 2609 ntAPPRIS ALT2 TSL 2 BASIC5.79□□□□□ -1.48
LTBRP36941 LIX1-AS1-201ENST00000504578 1793 ntTSL 5 BASIC5.79□□□□□ -1.48
LTBRP36941 GPATCH2L-201ENST00000261530 14007 ntTSL 2 BASIC5.79□□□□□ -1.48
LTBRP36941 MMP8-201ENST00000236826 3056 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
LTBRP36941 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC5.79□□□□□ -1.48
LTBRP36941 WDR17-201ENST00000280190 4705 ntAPPRIS P3 TSL 1 (best) BASIC5.79□□□□□ -1.48
LTBRP36941 AC124017.1-201ENST00000508112 1594 ntTSL 5 BASIC5.79□□□□□ -1.48
LTBRP36941 SREK1IP1-204ENST00000513458 6876 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
LTBRP36941 SORCS1-209ENST00000612154 6862 ntTSL 5 BASIC5.79□□□□□ -1.48
LTBRP36941 C16orf62-204ENST00000448695 3353 ntTSL 5 BASIC5.79□□□□□ -1.48
LTBRP36941 C16orf62-216ENST00000543152 3352 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
LTBRP36941 AC087516.2-201ENST00000558963 3042 ntTSL 3 BASIC5.79□□□□□ -1.48
LTBRP36941 FGF1-216ENST00000621536 4062 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
LTBRP36941 OR52I2-203ENST00000641896 6591 ntAPPRIS ALT2 BASIC5.78□□□□□ -1.48
LTBRP36941 NELL2-201ENST00000333837 2943 ntTSL 2 BASIC5.78□□□□□ -1.48
LTBRP36941 SMARCE1-208ENST00000474246 2124 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
LTBRP36941 WDR63-202ENST00000326813 2888 ntAPPRIS ALT2 TSL 2 BASIC5.78□□□□□ -1.48
LTBRP36941 ELMOD2-201ENST00000323570 4409 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
LTBRP36941 DOCK9-203ENST00000376460 7549 ntAPPRIS P2 TSL 5 BASIC5.78□□□□□ -1.48
LTBRP36941 NUP93-202ENST00000542526 8257 ntTSL 2 BASIC5.78□□□□□ -1.48
LTBRP36941 AC239809.3-214ENST00000496508 2513 ntTSL 2 BASIC5.78□□□□□ -1.48
LTBRP36941 OR4F17-202ENST00000585993 2669 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
LTBRP36941 ZCCHC6-201ENST00000277141 5724 ntTSL 2 BASIC5.78□□□□□ -1.48
LTBRP36941 ARHGEF6-201ENST00000250617 6019 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
LTBRP36941 EFNA5-206ENST00000611503 4933 ntTSL 5 BASIC5.78□□□□□ -1.48
LTBRP36941 OR9G4-201ENST00000302957 984 ntBASIC5.78□□□□□ -1.48
LTBRP36941 SNORA17.1-201ENST00000362945 126 ntBASIC5.78□□□□□ -1.48
LTBRP36941 RNU6-433P-201ENST00000363216 104 ntBASIC5.78□□□□□ -1.48
LTBRP36941 IL20-202ENST00000367098 1553 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
LTBRP36941 MDM4-204ENST00000367183 9098 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
LTBRP36941 CD80-202ENST00000383669 771 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
LTBRP36941 EEF1E1-BLOC1S5-201ENST00000397456 768 ntAPPRIS P1 TSL 3 BASIC5.78□□□□□ -1.48
LTBRP36941 MTCYBP36-201ENST00000404146 440 ntBASIC5.78□□□□□ -1.48
LTBRP36941 LINC00342-201ENST00000412393 654 ntTSL 3 BASIC5.78□□□□□ -1.48
LTBRP36941 AL391097.2-201ENST00000435057 485 ntTSL 3 BASIC5.78□□□□□ -1.48
LTBRP36941 AC076966.1-201ENST00000435560 351 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
LTBRP36941 CBX1P4-201ENST00000439415 457 ntBASIC5.78□□□□□ -1.48
LTBRP36941 AL831737.1-201ENST00000441288 271 ntBASIC5.78□□□□□ -1.48
LTBRP36941 MID1-209ENST00000453318 6393 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 79.7 ms