Protein–RNA interactions for Protein: P06340

HLA-DOA, HLA class II histocompatibility antigen, DO alpha chain, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOAP06340 AC025574.1-201ENST00000554784 1653 ntBASIC5.69□□□□□ -1.5
HLA-DOAP06340 TSPAN8-202ENST00000393330 1516 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
HLA-DOAP06340 MAPK10-338ENST00000641647 3362 ntBASIC5.69□□□□□ -1.5
HLA-DOAP06340 SCN11A-203ENST00000456224 5262 ntAPPRIS ALT2 TSL 5 BASIC5.69□□□□□ -1.5
HLA-DOAP06340 IFIT1-201ENST00000371804 1880 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
HLA-DOAP06340 ESCO1-204ENST00000622333 1850 ntTSL 2 BASIC5.69□□□□□ -1.5
HLA-DOAP06340 USP28-213ENST00000544967 3498 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
HLA-DOAP06340 MAP3K7-201ENST00000369320 3328 ntTSL 5 BASIC5.69□□□□□ -1.5
HLA-DOAP06340 SUPT3H-203ENST00000371460 2389 ntAPPRIS P4 TSL 1 (best) BASIC5.69□□□□□ -1.5
HLA-DOAP06340 AC107953.2-201ENST00000518362 1408 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
HLA-DOAP06340 GTDC1-207ENST00000409298 2209 ntTSL 5 BASIC5.69□□□□□ -1.5
HLA-DOAP06340 ATP7A-202ENST00000343533 8289 ntTSL 5 BASIC5.69□□□□□ -1.5
HLA-DOAP06340 OR4K15-201ENST00000305051 1216 ntBASIC5.69□□□□□ -1.5
HLA-DOAP06340 S100A9-201ENST00000368738 577 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
HLA-DOAP06340 OR13C3-201ENST00000374781 1108 ntBASIC5.69□□□□□ -1.5
HLA-DOAP06340 S100G-201ENST00000380200 455 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
HLA-DOAP06340 AL136310.1-201ENST00000404926 654 ntBASIC5.69□□□□□ -1.5
HLA-DOAP06340 RN7SKP16-201ENST00000410180 299 ntBASIC5.69□□□□□ -1.5
HLA-DOAP06340 RNU4-72P-201ENST00000410754 173 ntBASIC5.69□□□□□ -1.5
HLA-DOAP06340 AC010385.1-201ENST00000412374 256 ntBASIC5.69□□□□□ -1.5
HLA-DOAP06340 RAP1BP1-201ENST00000412709 553 ntBASIC5.69□□□□□ -1.5
HLA-DOAP06340 AL365184.1-201ENST00000413801 572 ntTSL 3 BASIC5.69□□□□□ -1.5
HLA-DOAP06340 AL356320.2-201ENST00000417263 507 ntBASIC5.69□□□□□ -1.5
HLA-DOAP06340 AL391839.1-201ENST00000417447 265 ntTSL 2 BASIC5.69□□□□□ -1.5
HLA-DOAP06340 AL354766.1-201ENST00000423396 542 ntBASIC5.69□□□□□ -1.5
HLA-DOAP06340 AC005189.1-201ENST00000431286 310 ntBASIC5.69□□□□□ -1.5
HLA-DOAP06340 AC010153.1-201ENST00000432862 727 ntBASIC5.69□□□□□ -1.5
HLA-DOAP06340 LINC00280-201ENST00000439525 448 ntTSL 2 BASIC5.69□□□□□ -1.5
HLA-DOAP06340 EEF1A1P39-201ENST00000440791 250 ntBASIC5.69□□□□□ -1.5
HLA-DOAP06340 ARL4AP3-201ENST00000441452 574 ntBASIC5.69□□□□□ -1.5
HLA-DOAP06340 FGF7P5-201ENST00000441829 291 ntBASIC5.69□□□□□ -1.5
HLA-DOAP06340 UBE2D3P4-201ENST00000441973 436 ntBASIC5.69□□□□□ -1.5
HLA-DOAP06340 AL035701.1-201ENST00000444038 462 ntTSL 3 BASIC5.69□□□□□ -1.5
HLA-DOAP06340 AL451164.2-201ENST00000445932 597 ntTSL 2 BASIC5.69□□□□□ -1.5
HLA-DOAP06340 MRPL35P2-201ENST00000448009 511 ntBASIC5.69□□□□□ -1.5
HLA-DOAP06340 RPS6P2-201ENST00000454208 705 ntBASIC5.69□□□□□ -1.5
HLA-DOAP06340 AC010890.1-201ENST00000454699 469 ntTSL 4 BASIC5.69□□□□□ -1.5
HLA-DOAP06340 SNHG12-207ENST00000475441 444 ntTSL 3 BASIC5.69□□□□□ -1.5
HLA-DOAP06340 RN7SL346P-201ENST00000491561 294 ntBASIC5.69□□□□□ -1.5
HLA-DOAP06340 AC026414.1-201ENST00000504046 698 ntBASIC5.69□□□□□ -1.5
HLA-DOAP06340 AC139713.2-213ENST00000505000 796 ntTSL 2 BASIC5.69□□□□□ -1.5
HLA-DOAP06340 AC073358.1-201ENST00000505671 684 ntBASIC5.69□□□□□ -1.5
HLA-DOAP06340 AC091868.1-201ENST00000508746 304 ntBASIC5.69□□□□□ -1.5
HLA-DOAP06340 AC079921.1-201ENST00000509449 946 ntTSL 3 BASIC5.69□□□□□ -1.5
HLA-DOAP06340 LINC02465-204ENST00000514892 481 ntTSL 2 BASIC5.69□□□□□ -1.5
HLA-DOAP06340 RNU6-1129P-201ENST00000515964 104 ntBASIC5.69□□□□□ -1.5
HLA-DOAP06340 RN7SKP92-201ENST00000517266 244 ntBASIC5.69□□□□□ -1.5
HLA-DOAP06340 GTF2IP11-201ENST00000526931 420 ntBASIC5.69□□□□□ -1.5
HLA-DOAP06340 OR5M2P-201ENST00000529003 936 ntBASIC5.69□□□□□ -1.5
HLA-DOAP06340 NDUFS5P6-201ENST00000529136 295 ntBASIC5.69□□□□□ -1.5
HLA-DOAP06340 AC092112.1-201ENST00000538329 640 ntTSL 3 BASIC5.69□□□□□ -1.5
HLA-DOAP06340 AC025035.1-201ENST00000551571 894 ntTSL 2 BASIC5.69□□□□□ -1.5
HLA-DOAP06340 AC022655.1-201ENST00000578039 288 ntTSL 3 BASIC5.69□□□□□ -1.5
HLA-DOAP06340 AC015688.2-201ENST00000584523 262 ntBASIC5.69□□□□□ -1.5
HLA-DOAP06340 AC092296.3-201ENST00000589968 249 ntTSL 3 BASIC5.69□□□□□ -1.5
HLA-DOAP06340 AC024563.1-202ENST00000597533 419 ntTSL 3 BASIC5.69□□□□□ -1.5
HLA-DOAP06340 MIR378J-201ENST00000611988 109 ntBASIC5.69□□□□□ -1.5
HLA-DOAP06340 AC024257.5-201ENST00000612739 531 ntBASIC5.69□□□□□ -1.5
HLA-DOAP06340 AP001043.1-201ENST00000626259 773 ntTSL 5 BASIC5.69□□□□□ -1.5
HLA-DOAP06340 SATB1-AS1-259ENST00000629477 853 ntTSL 5 BASIC5.69□□□□□ -1.5
HLA-DOAP06340 OR13C3-202ENST00000641090 1108 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
HLA-DOAP06340 OR4K15-202ENST00000641512 1216 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
HLA-DOAP06340 ZNF568-214ENST00000616085 3542 ntTSL 5 BASIC5.69□□□□□ -1.5
HLA-DOAP06340 CP-201ENST00000264613 4676 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
HLA-DOAP06340 ATPAF1-212ENST00000542495 1779 ntTSL 2 BASIC5.69□□□□□ -1.5
HLA-DOAP06340 SREK1-203ENST00000380918 2433 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
HLA-DOAP06340 OR8H2-201ENST00000313503 3088 ntAPPRIS P2 BASIC5.69□□□□□ -1.5
HLA-DOAP06340 AC099673.1-201ENST00000452199 2296 ntTSL 2 BASIC5.69□□□□□ -1.5
HLA-DOAP06340 ITCH-207ENST00000535650 2940 ntTSL 2 BASIC5.69□□□□□ -1.5
HLA-DOAP06340 POU2F1-202ENST00000367862 14038 ntAPPRIS ALT2 TSL 1 (best) BASIC5.69□□□□□ -1.5
HLA-DOAP06340 ZNF677-201ENST00000333952 3422 ntAPPRIS P1 TSL 2 BASIC5.69□□□□□ -1.5
HLA-DOAP06340 DDX20-202ENST00000475700 4332 ntTSL 2 BASIC5.69□□□□□ -1.5
HLA-DOAP06340 KIAA1328-202ENST00000586135 1863 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
HLA-DOAP06340 ZNF410-211ENST00000555044 2601 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
HLA-DOAP06340 FILIP1-202ENST00000370020 4051 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
HLA-DOAP06340 EDA2R-203ENST00000396050 3429 ntAPPRIS ALT2 TSL 5 BASIC5.68□□□□□ -1.5
HLA-DOAP06340 MGST1-201ENST00000010404 901 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
HLA-DOAP06340 GNGT1-201ENST00000248572 720 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
HLA-DOAP06340 MGST1-203ENST00000396207 909 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
HLA-DOAP06340 Y_RNA.599-201ENST00000410489 109 ntBASIC5.68□□□□□ -1.5
HLA-DOAP06340 MTND4P3-201ENST00000417829 541 ntBASIC5.68□□□□□ -1.5
HLA-DOAP06340 AC003075.1-202ENST00000419382 720 ntTSL 3 BASIC5.68□□□□□ -1.5
HLA-DOAP06340 AC023128.2-201ENST00000420880 1223 ntBASIC5.68□□□□□ -1.5
HLA-DOAP06340 AL078590.2-202ENST00000422736 568 ntTSL 3 BASIC5.68□□□□□ -1.5
HLA-DOAP06340 AC009480.2-201ENST00000422916 432 ntBASIC5.68□□□□□ -1.5
HLA-DOAP06340 LINC02238-201ENST00000424953 557 ntTSL 5 BASIC5.68□□□□□ -1.5
HLA-DOAP06340 DLGAP5P1-201ENST00000430307 464 ntBASIC5.68□□□□□ -1.5
HLA-DOAP06340 AL451139.1-201ENST00000434718 346 ntBASIC5.68□□□□□ -1.5
HLA-DOAP06340 CYCSP11-201ENST00000436426 315 ntBASIC5.68□□□□□ -1.5
HLA-DOAP06340 ELOCP30-201ENST00000447108 299 ntBASIC5.68□□□□□ -1.5
HLA-DOAP06340 AC104781.1-201ENST00000449838 397 ntTSL 3 BASIC5.68□□□□□ -1.5
HLA-DOAP06340 AC073073.1-201ENST00000493920 463 ntBASIC5.68□□□□□ -1.5
HLA-DOAP06340 AC112206.2-204ENST00000504068 793 ntTSL 3 BASIC5.68□□□□□ -1.5
HLA-DOAP06340 EGFLAM-AS3-201ENST00000505267 549 ntTSL 5 BASIC5.68□□□□□ -1.5
HLA-DOAP06340 RNU6-709P-201ENST00000517257 104 ntBASIC5.68□□□□□ -1.5
HLA-DOAP06340 AC097173.2-201ENST00000518701 474 ntTSL 3 BASIC5.68□□□□□ -1.5
HLA-DOAP06340 AP003461.1-201ENST00000528866 78 ntBASIC5.68□□□□□ -1.5
HLA-DOAP06340 AC008015.1-201ENST00000555505 465 ntBASIC5.68□□□□□ -1.5
HLA-DOAP06340 AL110505.1-201ENST00000557062 522 ntTSL 3 BASIC5.68□□□□□ -1.5
HLA-DOAP06340 NDUFAF4P1-201ENST00000559425 519 ntBASIC5.68□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 169.5 ms