Protein–RNA interactions for Protein: O43679

LDB2, LIM domain-binding protein 2, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB2O43679 CASC17-201ENST00000569074 2059 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
LDB2O43679 ECM2-202ENST00000375540 1606 ntTSL 2 BASIC4.79□□□□□ -1.64
LDB2O43679 SLC4A10-206ENST00000446997 5551 ntAPPRIS P4 TSL 1 (best) BASIC4.78□□□□□ -1.64
LDB2O43679 CD96-203ENST00000438817 1565 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
LDB2O43679 KRR1-201ENST00000229214 10118 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
LDB2O43679 RLIM-201ENST00000332687 8317 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
LDB2O43679 EOGT-209ENST00000540955 1332 ntTSL 2 BASIC4.78□□□□□ -1.64
LDB2O43679 ZNF382-204ENST00000439428 2742 ntAPPRIS ALT2 TSL 1 (best) BASIC4.78□□□□□ -1.64
LDB2O43679 SALL4P2-201ENST00000423288 2910 ntBASIC4.78□□□□□ -1.64
LDB2O43679 FOXP2-220ENST00000634411 4065 ntTSL 5 BASIC4.78□□□□□ -1.64
LDB2O43679 CDH17-201ENST00000027335 3693 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
LDB2O43679 AL359922.3-201ENST00000624779 1670 ntBASIC4.78□□□□□ -1.64
LDB2O43679 OR4P4-201ENST00000314612 939 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
LDB2O43679 PPP1R42-201ENST00000324682 1084 ntAPPRIS P2 TSL 1 (best) BASIC4.78□□□□□ -1.64
LDB2O43679 RNA5SP27-201ENST00000363839 119 ntBASIC4.78□□□□□ -1.64
LDB2O43679 EIF1AY-202ENST00000382772 746 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
LDB2O43679 SNORD65C-201ENST00000390962 71 ntBASIC4.78□□□□□ -1.64
LDB2O43679 MCTS2P-201ENST00000394552 546 ntBASIC4.78□□□□□ -1.64
LDB2O43679 RPL23AP59-201ENST00000399415 461 ntBASIC4.78□□□□□ -1.64
LDB2O43679 HNMT-204ENST00000410115 1150 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
LDB2O43679 AF240627.1-201ENST00000416002 879 ntTSL 3 BASIC4.78□□□□□ -1.64
LDB2O43679 RPS3AP37-201ENST00000419176 745 ntBASIC4.78□□□□□ -1.64
LDB2O43679 AC010099.3-201ENST00000423896 409 ntBASIC4.78□□□□□ -1.64
LDB2O43679 RPL23AP4-201ENST00000427757 463 ntBASIC4.78□□□□□ -1.64
LDB2O43679 OR2B7P-201ENST00000429302 934 ntBASIC4.78□□□□□ -1.64
LDB2O43679 TEX41-205ENST00000431734 529 ntTSL 4 BASIC4.78□□□□□ -1.64
LDB2O43679 RPS6P15-201ENST00000431996 751 ntBASIC4.78□□□□□ -1.64
LDB2O43679 AC084290.1-201ENST00000434995 374 ntBASIC4.78□□□□□ -1.64
LDB2O43679 Z83846.1-201ENST00000446798 265 ntBASIC4.78□□□□□ -1.64
LDB2O43679 IMMP2L-205ENST00000450877 761 ntTSL 2 BASIC4.78□□□□□ -1.64
LDB2O43679 AP001596.1-202ENST00000452460 644 ntTSL 3 BASIC4.78□□□□□ -1.64
LDB2O43679 LINC01921-201ENST00000456163 393 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
LDB2O43679 AC104971.1-201ENST00000495117 578 ntBASIC4.78□□□□□ -1.64
LDB2O43679 PGRMC2-203ENST00000503588 818 ntTSL 4 BASIC4.78□□□□□ -1.64
LDB2O43679 SCARNA22-201ENST00000503991 125 ntBASIC4.78□□□□□ -1.64
LDB2O43679 AC097512.1-203ENST00000506425 957 ntTSL 3 BASIC4.78□□□□□ -1.64
LDB2O43679 AC091868.1-201ENST00000508746 304 ntBASIC4.78□□□□□ -1.64
LDB2O43679 LINC02231-201ENST00000510459 447 ntTSL 3 BASIC4.78□□□□□ -1.64
LDB2O43679 AC093297.1-201ENST00000511712 591 ntTSL 4 BASIC4.78□□□□□ -1.64
LDB2O43679 RAD21-204ENST00000518055 896 ntTSL 2 BASIC4.78□□□□□ -1.64
LDB2O43679 AP002444.1-201ENST00000534252 620 ntTSL 3 BASIC4.78□□□□□ -1.64
LDB2O43679 LINC02306-201ENST00000546412 529 ntTSL 3 BASIC4.78□□□□□ -1.64
LDB2O43679 AC091515.1-201ENST00000548110 679 ntBASIC4.78□□□□□ -1.64
LDB2O43679 AC133555.2-201ENST00000550213 292 ntBASIC4.78□□□□□ -1.64
LDB2O43679 NOVA1-AS1-203ENST00000552101 468 ntTSL 3 BASIC4.78□□□□□ -1.64
LDB2O43679 AC110023.1-201ENST00000554318 457 ntTSL 3 BASIC4.78□□□□□ -1.64
LDB2O43679 MTND4P33-201ENST00000556706 766 ntBASIC4.78□□□□□ -1.64
LDB2O43679 AC091117.1-201ENST00000560967 426 ntTSL 5 BASIC4.78□□□□□ -1.64
LDB2O43679 BGLT3-201ENST00000564523 994 ntBASIC4.78□□□□□ -1.64
LDB2O43679 AC004160.1-202ENST00000599917 578 ntTSL 5 BASIC4.78□□□□□ -1.64
LDB2O43679 AL035411.2-201ENST00000604022 421 ntBASIC4.78□□□□□ -1.64
LDB2O43679 AC087283.1-201ENST00000604029 1074 ntBASIC4.78□□□□□ -1.64
LDB2O43679 AC114878.2-201ENST00000604863 1251 ntBASIC4.78□□□□□ -1.64
LDB2O43679 C8orf59-207ENST00000611854 563 ntAPPRIS P1 TSL 2 BASIC4.78□□□□□ -1.64
LDB2O43679 FRG1HP-204ENST00000617940 757 ntBASIC4.78□□□□□ -1.64
LDB2O43679 AC010975.3-201ENST00000618727 978 ntBASIC4.78□□□□□ -1.64
LDB2O43679 SATB1-AS1-263ENST00000630022 622 ntTSL 5 BASIC4.78□□□□□ -1.64
LDB2O43679 A2MP1-204ENST00000566278 4130 ntBASIC4.78□□□□□ -1.64
LDB2O43679 UGT2B26P-201ENST00000508672 1613 ntBASIC4.78□□□□□ -1.64
LDB2O43679 AL445487.1-201ENST00000415694 1580 ntBASIC4.78□□□□□ -1.64
LDB2O43679 RLIMP2-201ENST00000427891 1563 ntBASIC4.78□□□□□ -1.64
LDB2O43679 DGKH-206ENST00000536612 3957 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
LDB2O43679 AL121950.1-201ENST00000624993 2077 ntBASIC4.77□□□□□ -1.65
LDB2O43679 TEX11-201ENST00000344304 2977 ntAPPRIS P3 TSL 5 BASIC4.77□□□□□ -1.65
LDB2O43679 STAP1-201ENST00000265404 1511 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
LDB2O43679 LIMA1-214ENST00000552783 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC4.77□□□□□ -1.65
LDB2O43679 EED-203ENST00000351625 1696 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
LDB2O43679 SMG1P4-204ENST00000523028 4131 ntBASIC4.77□□□□□ -1.65
LDB2O43679 NKRF-202ENST00000371527 3741 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
LDB2O43679 SASS6-201ENST00000287482 3880 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
LDB2O43679 OR5AS1-201ENST00000313555 975 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
LDB2O43679 FDCSP-201ENST00000317987 566 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
LDB2O43679 C11orf74-201ENST00000334307 863 ntAPPRIS P3 TSL 1 (best) BASIC4.77□□□□□ -1.65
LDB2O43679 RNA5SP191-201ENST00000362585 102 ntBASIC4.77□□□□□ -1.65
LDB2O43679 RN7SKP149-201ENST00000363008 344 ntBASIC4.77□□□□□ -1.65
LDB2O43679 RNU4-51P-201ENST00000364206 140 ntBASIC4.77□□□□□ -1.65
LDB2O43679 TEX30-204ENST00000376027 1106 ntTSL 5 BASIC4.77□□□□□ -1.65
LDB2O43679 BANF2-202ENST00000377805 444 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
LDB2O43679 S100G-201ENST00000380200 455 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
LDB2O43679 SNORD116-12-201ENST00000384468 92 ntBASIC4.77□□□□□ -1.65
LDB2O43679 RNU6-636P-201ENST00000384598 107 ntBASIC4.77□□□□□ -1.65
LDB2O43679 RNU6-244P-201ENST00000391028 104 ntBASIC4.77□□□□□ -1.65
LDB2O43679 CXCL8-202ENST00000401931 700 ntAPPRIS ALT1 TSL 1 (best) BASIC4.77□□□□□ -1.65
LDB2O43679 NPM1P40-201ENST00000412758 733 ntBASIC4.77□□□□□ -1.65
LDB2O43679 BMS1P17-201ENST00000413661 723 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
LDB2O43679 RPS7P9-201ENST00000414704 586 ntBASIC4.77□□□□□ -1.65
LDB2O43679 HMGB1P49-201ENST00000418882 569 ntBASIC4.77□□□□□ -1.65
LDB2O43679 AL513175.2-201ENST00000422071 443 ntBASIC4.77□□□□□ -1.65
LDB2O43679 AL133419.1-201ENST00000423153 640 ntTSL 3 BASIC4.77□□□□□ -1.65
LDB2O43679 HIGD1AP4-201ENST00000430194 280 ntBASIC4.77□□□□□ -1.65
LDB2O43679 MTND5P25-201ENST00000430499 799 ntBASIC4.77□□□□□ -1.65
LDB2O43679 CYCSP11-201ENST00000436426 315 ntBASIC4.77□□□□□ -1.65
LDB2O43679 AC015971.1-202ENST00000439077 514 ntTSL 3 BASIC4.77□□□□□ -1.65
LDB2O43679 AC064871.1-201ENST00000444562 427 ntTSL 3 BASIC4.77□□□□□ -1.65
LDB2O43679 RPL34P26-201ENST00000445636 354 ntBASIC4.77□□□□□ -1.65
LDB2O43679 TDGF1P1-201ENST00000445734 527 ntBASIC4.77□□□□□ -1.65
LDB2O43679 AL050341.1-201ENST00000447743 313 ntBASIC4.77□□□□□ -1.65
LDB2O43679 AL589880.1-201ENST00000448271 287 ntBASIC4.77□□□□□ -1.65
LDB2O43679 AC114814.3-201ENST00000449362 663 ntTSL 2 BASIC4.77□□□□□ -1.65
LDB2O43679 AC244505.3-201ENST00000454598 187 ntBASIC4.77□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 114.1 ms