Protein–RNA interactions for Protein: O43541

SMAD6, Mothers against decapentaplegic homolog 6, humanhuman

Known RBP Predictions only

Length 496 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6O43541 SLC9B1-202ENST00000394789 1735 ntAPPRIS ALT2 TSL 1 (best) BASIC4.89□□□□□ -1.63
SMAD6O43541 PROM1-220ENST00000540805 3908 ntAPPRIS ALT2 TSL 5 BASIC4.89□□□□□ -1.63
SMAD6O43541 R3HDM1-203ENST00000409606 3673 ntAPPRIS ALT1 TSL 2 BASIC4.88□□□□□ -1.63
SMAD6O43541 NBPF9-208ENST00000621074 4302 ntTSL 5 BASIC4.88□□□□□ -1.63
SMAD6O43541 AC012618.3-205ENST00000637896 1496 ntBASIC4.88□□□□□ -1.63
SMAD6O43541 PDE4D-205ENST00000360047 3122 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
SMAD6O43541 ZNF681-201ENST00000402377 6497 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
SMAD6O43541 HEATR5A-203ENST00000543095 7840 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
SMAD6O43541 SSR1-202ENST00000397511 3248 ntTSL 5 BASIC4.88□□□□□ -1.63
SMAD6O43541 FILIP1-203ENST00000393004 7807 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
SMAD6O43541 SPART-202ENST00000438666 4789 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
SMAD6O43541 RNU4-7P-201ENST00000364758 141 ntBASIC4.88□□□□□ -1.63
SMAD6O43541 DEC1-201ENST00000374016 1251 ntAPPRIS P2 TSL 1 (best) BASIC4.88□□□□□ -1.63
SMAD6O43541 RNU6-468P-201ENST00000384003 109 ntBASIC4.88□□□□□ -1.63
SMAD6O43541 HMGB1P13-201ENST00000406019 642 ntBASIC4.88□□□□□ -1.63
SMAD6O43541 CACYBP-203ENST00000406752 243 ntTSL 5 BASIC4.88□□□□□ -1.63
SMAD6O43541 UBE2V1P11-201ENST00000411559 285 ntBASIC4.88□□□□□ -1.63
SMAD6O43541 AC007738.1-201ENST00000413892 348 ntBASIC4.88□□□□□ -1.63
SMAD6O43541 RPL26P29-201ENST00000415623 438 ntBASIC4.88□□□□□ -1.63
SMAD6O43541 AF064860.1-201ENST00000416555 544 ntTSL 3 BASIC4.88□□□□□ -1.63
SMAD6O43541 AC019050.1-201ENST00000418508 492 ntBASIC4.88□□□□□ -1.63
SMAD6O43541 AC079790.1-201ENST00000420365 507 ntTSL 3 BASIC4.88□□□□□ -1.63
SMAD6O43541 LINC00993-201ENST00000420453 540 ntBASIC4.88□□□□□ -1.63
SMAD6O43541 AC090960.1-201ENST00000421072 306 ntBASIC4.88□□□□□ -1.63
SMAD6O43541 AC099336.2-201ENST00000422457 254 ntBASIC4.88□□□□□ -1.63
SMAD6O43541 C6orf52-203ENST00000426700 493 ntAPPRIS P2 TSL 2 BASIC4.88□□□□□ -1.63
SMAD6O43541 AC092162.1-201ENST00000432828 434 ntBASIC4.88□□□□□ -1.63
SMAD6O43541 TRIM31-AS1-204ENST00000440874 549 ntTSL 3 BASIC4.88□□□□□ -1.63
SMAD6O43541 AL357520.1-201ENST00000441557 453 ntBASIC4.88□□□□□ -1.63
SMAD6O43541 AL161621.1-201ENST00000444796 340 ntTSL 3 BASIC4.88□□□□□ -1.63
SMAD6O43541 AC044797.1-201ENST00000445744 679 ntBASIC4.88□□□□□ -1.63
SMAD6O43541 AL133260.2-201ENST00000445833 396 ntTSL 3 BASIC4.88□□□□□ -1.63
SMAD6O43541 AL732323.1-201ENST00000445897 456 ntTSL 3 BASIC4.88□□□□□ -1.63
SMAD6O43541 AL646090.1-201ENST00000449928 492 ntTSL 5 BASIC4.88□□□□□ -1.63
SMAD6O43541 RPL7P55-201ENST00000450522 746 ntBASIC4.88□□□□□ -1.63
SMAD6O43541 LINC01813-201ENST00000451034 712 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
SMAD6O43541 RPS5P7-201ENST00000456664 608 ntBASIC4.88□□□□□ -1.63
SMAD6O43541 RPS29P33-201ENST00000456717 146 ntBASIC4.88□□□□□ -1.63
SMAD6O43541 HNRNPDLP3-201ENST00000456745 380 ntBASIC4.88□□□□□ -1.63
SMAD6O43541 AC099560.2-201ENST00000457554 255 ntBASIC4.88□□□□□ -1.63
SMAD6O43541 COX7A2-205ENST00000460985 357 ntTSL 2 BASIC4.88□□□□□ -1.63
SMAD6O43541 AC011005.3-201ENST00000491624 395 ntBASIC4.88□□□□□ -1.63
SMAD6O43541 AC008897.1-201ENST00000494006 347 ntBASIC4.88□□□□□ -1.63
SMAD6O43541 AC104971.1-201ENST00000495117 578 ntBASIC4.88□□□□□ -1.63
SMAD6O43541 AC026719.1-201ENST00000506059 456 ntTSL 3 BASIC4.88□□□□□ -1.63
SMAD6O43541 AC091868.1-201ENST00000508746 304 ntBASIC4.88□□□□□ -1.63
SMAD6O43541 AC096736.1-201ENST00000512609 947 ntTSL 3 BASIC4.88□□□□□ -1.63
SMAD6O43541 HDAC2-AS2-209ENST00000519270 1244 ntTSL 4 BASIC4.88□□□□□ -1.63
SMAD6O43541 HMGB1P46-201ENST00000520062 610 ntBASIC4.88□□□□□ -1.63
SMAD6O43541 NPM1P6-201ENST00000521088 871 ntBASIC4.88□□□□□ -1.63
SMAD6O43541 AP000942.2-201ENST00000526310 628 ntTSL 3 BASIC4.88□□□□□ -1.63
SMAD6O43541 DDHD2-219ENST00000529845 945 ntTSL 5 BASIC4.88□□□□□ -1.63
SMAD6O43541 AC002091.1-201ENST00000578788 557 ntTSL 2 BASIC4.88□□□□□ -1.63
SMAD6O43541 MIR5699-201ENST00000578903 90 ntBASIC4.88□□□□□ -1.63
SMAD6O43541 AC090312.1-201ENST00000580637 348 ntBASIC4.88□□□□□ -1.63
SMAD6O43541 AL109653.1-201ENST00000603091 248 ntBASIC4.88□□□□□ -1.63
SMAD6O43541 AL353778.1-201ENST00000603149 408 ntBASIC4.88□□□□□ -1.63
SMAD6O43541 Z99497.2-201ENST00000603634 310 ntBASIC4.88□□□□□ -1.63
SMAD6O43541 AC025588.2-201ENST00000604851 466 ntBASIC4.88□□□□□ -1.63
SMAD6O43541 AC107952.2-201ENST00000606048 486 ntBASIC4.88□□□□□ -1.63
SMAD6O43541 MALAT1-205ENST00000610851 584 ntTSL 2 BASIC4.88□□□□□ -1.63
SMAD6O43541 OR8H2-202ENST00000618136 1038 ntAPPRIS ALT1 BASIC4.88□□□□□ -1.63
SMAD6O43541 AL035461.2-201ENST00000619201 524 ntBASIC4.88□□□□□ -1.63
SMAD6O43541 MIR6853-201ENST00000619642 74 ntBASIC4.88□□□□□ -1.63
SMAD6O43541 CCL4L2-215ENST00000620055 537 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
SMAD6O43541 LDHA-225ENST00000625635 141 ntTSL 5 BASIC4.88□□□□□ -1.63
SMAD6O43541 LINC01359-206ENST00000634775 888 ntTSL 5 BASIC4.88□□□□□ -1.63
SMAD6O43541 AC006927.2-201ENST00000639256 389 ntBASIC4.88□□□□□ -1.63
SMAD6O43541 WISP3-211ENST00000639360 1026 ntTSL 5 BASIC4.88□□□□□ -1.63
SMAD6O43541 BAZ2B-203ENST00000392782 8058 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
SMAD6O43541 CNTN5-207ENST00000527185 4303 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
SMAD6O43541 RMST-202ENST00000541282 2099 ntTSL 2 BASIC4.88□□□□□ -1.63
SMAD6O43541 USP50-205ENST00000616326 1419 ntAPPRIS ALT2 TSL 5 BASIC4.88□□□□□ -1.63
SMAD6O43541 RANBP3L-201ENST00000296604 3104 ntAPPRIS P3 TSL 1 (best) BASIC4.88□□□□□ -1.63
SMAD6O43541 AC000123.3-201ENST00000624029 4975 ntBASIC4.87□□□□□ -1.63
SMAD6O43541 LINC01189-201ENST00000428440 3321 ntTSL 2 BASIC4.87□□□□□ -1.63
SMAD6O43541 DNA2-201ENST00000358410 4208 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
SMAD6O43541 AC015813.1-203ENST00000585065 4722 ntTSL 2 BASIC4.87□□□□□ -1.63
SMAD6O43541 CASC19-204ENST00000641001 2055 ntBASIC4.87□□□□□ -1.63
SMAD6O43541 AP000756.2-201ENST00000624168 2567 ntBASIC4.87□□□□□ -1.63
SMAD6O43541 AC090017.1-201ENST00000548612 1779 ntBASIC4.87□□□□□ -1.63
SMAD6O43541 AC100778.3-201ENST00000580060 1750 ntBASIC4.87□□□□□ -1.63
SMAD6O43541 CSN3-201ENST00000304954 836 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
SMAD6O43541 PSG11-201ENST00000306322 990 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
SMAD6O43541 AC017079.1-201ENST00000333650 415 ntBASIC4.87□□□□□ -1.63
SMAD6O43541 AL590240.1-201ENST00000334118 313 ntBASIC4.87□□□□□ -1.63
SMAD6O43541 RNU5B-4P-201ENST00000363508 111 ntBASIC4.87□□□□□ -1.63
SMAD6O43541 C1orf54-201ENST00000369098 418 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
SMAD6O43541 R3HCC1L-204ENST00000370586 941 ntTSL 3 BASIC4.87□□□□□ -1.63
SMAD6O43541 EQTN-201ENST00000380031 725 ntAPPRIS ALT2 TSL 1 (best) BASIC4.87□□□□□ -1.63
SMAD6O43541 LY6G5C-210ENST00000383237 674 ntAPPRIS P2 TSL 1 (best) BASIC4.87□□□□□ -1.63
SMAD6O43541 ARL4A-204ENST00000396664 1144 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
SMAD6O43541 AC004870.3-202ENST00000412996 432 ntTSL 3 BASIC4.87□□□□□ -1.63
SMAD6O43541 AC010745.4-201ENST00000420130 740 ntTSL 5 BASIC4.87□□□□□ -1.63
SMAD6O43541 AC104333.2-201ENST00000422630 192 ntBASIC4.87□□□□□ -1.63
SMAD6O43541 FABP7P1-201ENST00000424004 391 ntBASIC4.87□□□□□ -1.63
SMAD6O43541 TCEAL3-AS1-201ENST00000424887 361 ntTSL 5 BASIC4.87□□□□□ -1.63
SMAD6O43541 OSTCP5-201ENST00000425293 453 ntBASIC4.87□□□□□ -1.63
SMAD6O43541 LINC01400-201ENST00000426358 947 ntTSL 3 BASIC4.87□□□□□ -1.63
SMAD6O43541 AC008568.1-203ENST00000433406 765 ntTSL 3 BASIC4.87□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 92.5 ms