Protein–RNA interactions for Protein: O00322

UPK1A, Uroplakin-1a, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1AO00322 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
UPK1AO00322 LZTFL1-216ENST00000539217 4113 ntTSL 2 BASIC3.92□□□□□ -1.78
UPK1AO00322 MARK2P15-201ENST00000432204 2186 ntBASIC3.92□□□□□ -1.78
UPK1AO00322 STEAP2-203ENST00000394622 6612 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
UPK1AO00322 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC3.91□□□□□ -1.78
UPK1AO00322 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
UPK1AO00322 AC015813.6-201ENST00000624409 5808 ntBASIC3.91□□□□□ -1.78
UPK1AO00322 MALRD1-204ENST00000454679 6880 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
UPK1AO00322 CAST-207ENST00000395813 4356 ntAPPRIS ALT2 TSL 5 BASIC3.91□□□□□ -1.78
UPK1AO00322 RNU6-697P-201ENST00000363348 107 ntBASIC3.91□□□□□ -1.78
UPK1AO00322 RNA5SP366-201ENST00000365454 123 ntBASIC3.91□□□□□ -1.78
UPK1AO00322 AC104297.1-201ENST00000393779 870 ntBASIC3.91□□□□□ -1.78
UPK1AO00322 RPL23AP48-201ENST00000406913 488 ntBASIC3.91□□□□□ -1.78
UPK1AO00322 AL603766.1-201ENST00000407763 664 ntBASIC3.91□□□□□ -1.78
UPK1AO00322 DAB1-AS1-201ENST00000416598 1262 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
UPK1AO00322 GAPDHP49-201ENST00000421421 961 ntBASIC3.91□□□□□ -1.78
UPK1AO00322 AL590666.1-201ENST00000428641 433 ntTSL 2 BASIC3.91□□□□□ -1.78
UPK1AO00322 AL354977.2-201ENST00000430387 728 ntTSL 3 BASIC3.91□□□□□ -1.78
UPK1AO00322 CCNB1IP1P2-201ENST00000432876 818 ntBASIC3.91□□□□□ -1.78
UPK1AO00322 MTCO3P17-201ENST00000443775 513 ntBASIC3.91□□□□□ -1.78
UPK1AO00322 YWHAQP9-201ENST00000445891 512 ntBASIC3.91□□□□□ -1.78
UPK1AO00322 UBA52P3-201ENST00000491303 382 ntBASIC3.91□□□□□ -1.78
UPK1AO00322 AC113404.3-201ENST00000506621 555 ntTSL 5 BASIC3.91□□□□□ -1.78
UPK1AO00322 AC093840.1-201ENST00000511599 336 ntBASIC3.91□□□□□ -1.78
UPK1AO00322 LINC00500-201ENST00000515860 539 ntTSL 4 BASIC3.91□□□□□ -1.78
UPK1AO00322 AC009643.1-201ENST00000532030 391 ntBASIC3.91□□□□□ -1.78
UPK1AO00322 ASB8-204ENST00000536071 568 ntTSL 4 BASIC3.91□□□□□ -1.78
UPK1AO00322 LINC00520-201ENST00000554186 831 ntTSL 5 BASIC3.91□□□□□ -1.78
UPK1AO00322 TVP23BP1-201ENST00000557500 617 ntBASIC3.91□□□□□ -1.78
UPK1AO00322 AC090125.1-201ENST00000581541 493 ntTSL 3 BASIC3.91□□□□□ -1.78
UPK1AO00322 AC092316.1-201ENST00000598703 297 ntTSL 5 BASIC3.91□□□□□ -1.78
UPK1AO00322 FAM49B-229ENST00000615041 750 ntTSL 5 BASIC3.91□□□□□ -1.78
UPK1AO00322 HMGN2-210ENST00000619352 1148 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
UPK1AO00322 AP000843.1-201ENST00000624880 701 ntBASIC3.91□□□□□ -1.78
UPK1AO00322 NRXN1-223ENST00000625891 1164 ntTSL 4 BASIC3.91□□□□□ -1.78
UPK1AO00322 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC3.91□□□□□ -1.78
UPK1AO00322 OXR1-201ENST00000297447 1944 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
UPK1AO00322 OR8D1-202ENST00000641015 8286 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
UPK1AO00322 AC092162.3-201ENST00000624511 1624 ntBASIC3.91□□□□□ -1.78
UPK1AO00322 LINC00158-201ENST00000332587 1476 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
UPK1AO00322 ATXN3-207ENST00000503767 1315 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
UPK1AO00322 AL627171.1-201ENST00000618845 1308 ntBASIC3.91□□□□□ -1.78
UPK1AO00322 MRE11-202ENST00000323977 2588 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
UPK1AO00322 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC3.91□□□□□ -1.78
UPK1AO00322 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC3.91□□□□□ -1.78
UPK1AO00322 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC3.91□□□□□ -1.78
UPK1AO00322 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
UPK1AO00322 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC3.9□□□□□ -1.78
UPK1AO00322 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
UPK1AO00322 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC3.9□□□□□ -1.78
UPK1AO00322 PMS1-202ENST00000374826 948 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
UPK1AO00322 AL161909.1-201ENST00000397390 712 ntBASIC3.9□□□□□ -1.79
UPK1AO00322 AP003774.2-202ENST00000449694 341 ntTSL 3 BASIC3.9□□□□□ -1.79
UPK1AO00322 AC010894.4-201ENST00000454203 457 ntTSL 3 BASIC3.9□□□□□ -1.79
UPK1AO00322 HSPE1P22-201ENST00000456856 327 ntBASIC3.9□□□□□ -1.79
UPK1AO00322 TPPP2-202ENST00000460647 568 ntTSL 3 BASIC3.9□□□□□ -1.79
UPK1AO00322 AC109327.1-201ENST00000471666 403 ntBASIC3.9□□□□□ -1.79
UPK1AO00322 AC069499.1-201ENST00000489433 509 ntBASIC3.9□□□□□ -1.79
UPK1AO00322 AC103853.1-201ENST00000520588 649 ntTSL 5 BASIC3.9□□□□□ -1.79
UPK1AO00322 AC105233.3-201ENST00000531125 744 ntBASIC3.9□□□□□ -1.79
UPK1AO00322 SPTY2D1-AS1-203ENST00000542172 331 ntAPPRIS ALT2 TSL 1 (best) BASIC3.9□□□□□ -1.79
UPK1AO00322 C15orf41-203ENST00000562489 715 ntTSL 2 BASIC3.9□□□□□ -1.79
UPK1AO00322 NUDT7-203ENST00000563839 316 ntTSL 3 BASIC3.9□□□□□ -1.79
UPK1AO00322 AMZ2-204ENST00000577273 895 ntTSL 5 BASIC3.9□□□□□ -1.79
UPK1AO00322 MIR4700-201ENST00000578311 74 ntBASIC3.9□□□□□ -1.79
UPK1AO00322 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC3.9□□□□□ -1.79
UPK1AO00322 CEACAM7-204ENST00000602225 524 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
UPK1AO00322 AC004241.3-201ENST00000611728 517 ntBASIC3.9□□□□□ -1.79
UPK1AO00322 MIR7641-1-201ENST00000627518 61 ntBASIC3.9□□□□□ -1.79
UPK1AO00322 AL773545.4-201ENST00000637262 310 ntBASIC3.9□□□□□ -1.79
UPK1AO00322 AL513478.4-201ENST00000641636 310 ntBASIC3.9□□□□□ -1.79
UPK1AO00322 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC3.9□□□□□ -1.79
UPK1AO00322 BDP1P-201ENST00000582658 1990 ntBASIC3.9□□□□□ -1.79
UPK1AO00322 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
UPK1AO00322 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
UPK1AO00322 SLC5A12-202ENST00000396005 6250 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
UPK1AO00322 HSPD1P11-201ENST00000508643 1702 ntBASIC3.9□□□□□ -1.79
UPK1AO00322 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC3.89□□□□□ -1.79
UPK1AO00322 AC083899.2-201ENST00000423285 1376 ntBASIC3.89□□□□□ -1.79
UPK1AO00322 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC3.89□□□□□ -1.79
UPK1AO00322 ZNF560-201ENST00000301480 2654 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
UPK1AO00322 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC3.89□□□□□ -1.79
UPK1AO00322 SPATA31D2P-201ENST00000429999 4388 ntBASIC3.89□□□□□ -1.79
UPK1AO00322 RABGAP1L-206ENST00000367688 1425 ntTSL 2 BASIC3.89□□□□□ -1.79
UPK1AO00322 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC3.89□□□□□ -1.79
UPK1AO00322 CNTN6-205ENST00000446702 4513 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
UPK1AO00322 F13B-201ENST00000367412 2217 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
UPK1AO00322 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC3.89□□□□□ -1.79
UPK1AO00322 CEP290-202ENST00000397838 2421 ntTSL 5 BASIC3.89□□□□□ -1.79
UPK1AO00322 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
UPK1AO00322 SYF2-202ENST00000354361 926 ntTSL 2 BASIC3.89□□□□□ -1.79
UPK1AO00322 OR5L2-201ENST00000378397 936 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
UPK1AO00322 TRAV9-2-201ENST00000390441 394 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
UPK1AO00322 AL035696.2-201ENST00000407941 709 ntBASIC3.89□□□□□ -1.79
UPK1AO00322 RNU4-25P-201ENST00000410569 230 ntBASIC3.89□□□□□ -1.79
UPK1AO00322 RN7SKP182-201ENST00000410772 298 ntBASIC3.89□□□□□ -1.79
UPK1AO00322 RPL23AP26-201ENST00000412728 464 ntBASIC3.89□□□□□ -1.79
UPK1AO00322 AC016769.2-201ENST00000414815 475 ntBASIC3.89□□□□□ -1.79
UPK1AO00322 LINC01614-201ENST00000415479 648 ntTSL 2 BASIC3.89□□□□□ -1.79
UPK1AO00322 AL353608.1-201ENST00000419576 416 ntTSL 5 BASIC3.89□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 108.5 ms