Protein–RNA interactions for Protein: Q9Y2B5

VPS9D1, VPS9 domain-containing protein 1, humanhuman

Predictions only

Length 631 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1Q9Y2B5 IGKV2-29-201ENST00000521304 372 ntBASIC7.4□□□□□ -1.22
VPS9D1Q9Y2B5 AP003733.2-201ENST00000529409 171 ntBASIC7.4□□□□□ -1.22
VPS9D1Q9Y2B5 LINC02392-201ENST00000548172 537 ntTSL 4 BASIC7.4□□□□□ -1.22
VPS9D1Q9Y2B5 RPA2P1-201ENST00000556557 721 ntBASIC7.4□□□□□ -1.22
VPS9D1Q9Y2B5 AC091073.1-201ENST00000559620 666 ntTSL 3 BASIC7.4□□□□□ -1.22
VPS9D1Q9Y2B5 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC7.4□□□□□ -1.22
VPS9D1Q9Y2B5 LRRC75A-AS1-220ENST00000579473 585 ntTSL 4 BASIC7.4□□□□□ -1.22
VPS9D1Q9Y2B5 AP005202.2-201ENST00000582386 658 ntTSL 3 BASIC7.4□□□□□ -1.22
VPS9D1Q9Y2B5 RPL26-207ENST00000583011 524 ntAPPRIS P1 TSL 3 BASIC7.4□□□□□ -1.22
VPS9D1Q9Y2B5 AC005899.2-201ENST00000584353 90 ntBASIC7.4□□□□□ -1.22
VPS9D1Q9Y2B5 AC005323.1-203ENST00000585303 566 ntTSL 5 BASIC7.4□□□□□ -1.22
VPS9D1Q9Y2B5 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC7.4□□□□□ -1.22
VPS9D1Q9Y2B5 HNRNPA3P9-201ENST00000604913 979 ntBASIC7.4□□□□□ -1.22
VPS9D1Q9Y2B5 AC015712.7-201ENST00000615211 635 ntBASIC7.4□□□□□ -1.22
VPS9D1Q9Y2B5 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC7.4□□□□□ -1.22
VPS9D1Q9Y2B5 AL353898.2-201ENST00000623000 255 ntBASIC7.4□□□□□ -1.22
VPS9D1Q9Y2B5 OR4X2-201ENST00000624868 1025 ntAPPRIS P1 BASIC7.4□□□□□ -1.22
VPS9D1Q9Y2B5 PCBP1-AS1-286ENST00000625888 765 ntTSL 5 BASIC7.4□□□□□ -1.22
VPS9D1Q9Y2B5 OR10AD1-201ENST00000310248 1305 ntAPPRIS P1 BASIC7.4□□□□□ -1.22
VPS9D1Q9Y2B5 MKI67P1-201ENST00000604297 1460 ntBASIC7.4□□□□□ -1.22
VPS9D1Q9Y2B5 LINC01011-204ENST00000605901 1573 ntTSL 2 BASIC7.4□□□□□ -1.22
VPS9D1Q9Y2B5 PPIL1-201ENST00000373699 1739 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.23
VPS9D1Q9Y2B5 AL450423.1-201ENST00000615176 1857 ntTSL 2 BASIC7.4□□□□□ -1.23
VPS9D1Q9Y2B5 GAPVD1-201ENST00000265956 2667 ntTSL 5 BASIC7.4□□□□□ -1.23
VPS9D1Q9Y2B5 SAMMSON-222ENST00000641901 2727 ntBASIC7.4□□□□□ -1.23
VPS9D1Q9Y2B5 PRKCQ-204ENST00000610727 3077 ntTSL 5 BASIC7.4□□□□□ -1.23
VPS9D1Q9Y2B5 ZNF521-203ENST00000538137 4253 ntAPPRIS P1 TSL 2 BASIC7.4□□□□□ -1.23
VPS9D1Q9Y2B5 C10orf67-204ENST00000636213 3981 ntAPPRIS ALT2 TSL 5 BASIC7.39□□□□□ -1.23
VPS9D1Q9Y2B5 TRIM6-201ENST00000278302 3217 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
VPS9D1Q9Y2B5 ZNF20-201ENST00000334213 3061 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
VPS9D1Q9Y2B5 PSMD6-AS2-201ENST00000472046 2456 ntTSL 2 BASIC7.39□□□□□ -1.23
VPS9D1Q9Y2B5 SP110-203ENST00000358662 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC7.39□□□□□ -1.23
VPS9D1Q9Y2B5 LINC00320-204ENST00000437238 2004 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
VPS9D1Q9Y2B5 AC244502.1-201ENST00000514473 1951 ntTSL 2 BASIC7.39□□□□□ -1.23
VPS9D1Q9Y2B5 BMP10-201ENST00000295379 1584 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
VPS9D1Q9Y2B5 PAK5-201ENST00000353224 4500 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
VPS9D1Q9Y2B5 SF3A3P1-201ENST00000446317 1477 ntBASIC7.39□□□□□ -1.23
VPS9D1Q9Y2B5 AC108751.5-201ENST00000492880 1336 ntBASIC7.39□□□□□ -1.23
VPS9D1Q9Y2B5 DEFB1-201ENST00000297439 478 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
VPS9D1Q9Y2B5 RN7SKP162-201ENST00000363605 345 ntBASIC7.39□□□□□ -1.23
VPS9D1Q9Y2B5 RN7SKP174-201ENST00000363803 330 ntBASIC7.39□□□□□ -1.23
VPS9D1Q9Y2B5 Y_RNA.314-201ENST00000365114 102 ntBASIC7.39□□□□□ -1.23
VPS9D1Q9Y2B5 RGS8-203ENST00000367557 859 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
VPS9D1Q9Y2B5 S100A9-201ENST00000368738 577 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
VPS9D1Q9Y2B5 PPIAP26-201ENST00000377951 522 ntBASIC7.39□□□□□ -1.23
VPS9D1Q9Y2B5 AL590762.1-201ENST00000391782 432 ntBASIC7.39□□□□□ -1.23
VPS9D1Q9Y2B5 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC7.39□□□□□ -1.23
VPS9D1Q9Y2B5 AL139156.1-201ENST00000412785 841 ntBASIC7.39□□□□□ -1.23
VPS9D1Q9Y2B5 AL159174.1-202ENST00000425588 442 ntTSL 3 BASIC7.39□□□□□ -1.23
VPS9D1Q9Y2B5 MED13P1-201ENST00000428342 171 ntBASIC7.39□□□□□ -1.23
VPS9D1Q9Y2B5 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC7.39□□□□□ -1.23
VPS9D1Q9Y2B5 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC7.39□□□□□ -1.23
VPS9D1Q9Y2B5 RPL14P5-201ENST00000436474 730 ntBASIC7.39□□□□□ -1.23
VPS9D1Q9Y2B5 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC7.39□□□□□ -1.23
VPS9D1Q9Y2B5 FDPSP8-201ENST00000438304 1089 ntBASIC7.39□□□□□ -1.23
VPS9D1Q9Y2B5 SUMO2P3-201ENST00000438311 288 ntBASIC7.39□□□□□ -1.23
VPS9D1Q9Y2B5 RPS3AP12-201ENST00000443616 753 ntBASIC7.39□□□□□ -1.23
VPS9D1Q9Y2B5 AL445466.1-201ENST00000448432 357 ntBASIC7.39□□□□□ -1.23
VPS9D1Q9Y2B5 RPL34P22-201ENST00000468193 318 ntBASIC7.39□□□□□ -1.23
VPS9D1Q9Y2B5 RPL7P49-201ENST00000471402 708 ntBASIC7.39□□□□□ -1.23
VPS9D1Q9Y2B5 RN7SL549P-201ENST00000478997 282 ntBASIC7.39□□□□□ -1.23
VPS9D1Q9Y2B5 RNU6-189P-201ENST00000516120 101 ntBASIC7.39□□□□□ -1.23
VPS9D1Q9Y2B5 RNU6-1278P-201ENST00000516130 107 ntBASIC7.39□□□□□ -1.23
VPS9D1Q9Y2B5 AC010768.4-201ENST00000528183 520 ntTSL 3 BASIC7.39□□□□□ -1.23
VPS9D1Q9Y2B5 LINC02322-201ENST00000554773 338 ntTSL 2 BASIC7.39□□□□□ -1.23
VPS9D1Q9Y2B5 AC013283.1-201ENST00000557282 492 ntBASIC7.39□□□□□ -1.23
VPS9D1Q9Y2B5 MIR4262-201ENST00000578394 54 ntBASIC7.39□□□□□ -1.23
VPS9D1Q9Y2B5 TRIM37-212ENST00000584889 353 ntTSL 2 BASIC7.39□□□□□ -1.23
VPS9D1Q9Y2B5 AC004852.1-201ENST00000605206 154 ntBASIC7.39□□□□□ -1.23
VPS9D1Q9Y2B5 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
VPS9D1Q9Y2B5 MIR7162-201ENST00000611134 69 ntBASIC7.39□□□□□ -1.23
VPS9D1Q9Y2B5 AL591926.2-202ENST00000615199 719 ntTSL 5 BASIC7.39□□□□□ -1.23
VPS9D1Q9Y2B5 uc_338.12-201ENST00000616344 181 ntBASIC7.39□□□□□ -1.23
VPS9D1Q9Y2B5 AC103705.1-201ENST00000619013 241 ntBASIC7.39□□□□□ -1.23
VPS9D1Q9Y2B5 AC130454.1-201ENST00000622948 401 ntBASIC7.39□□□□□ -1.23
VPS9D1Q9Y2B5 AL159972.1-201ENST00000625150 448 ntBASIC7.39□□□□□ -1.23
VPS9D1Q9Y2B5 MIR4272-201ENST00000635924 64 ntBASIC7.39□□□□□ -1.23
VPS9D1Q9Y2B5 ERLIN2-201ENST00000276461 6073 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
VPS9D1Q9Y2B5 HLF-210ENST00000575345 3589 ntTSL 2 BASIC7.39□□□□□ -1.23
VPS9D1Q9Y2B5 STARD4-AS1-201ENST00000500779 5525 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
VPS9D1Q9Y2B5 ALPK2-201ENST00000361673 7303 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
VPS9D1Q9Y2B5 PCDH11Y-204ENST00000400457 9039 ntAPPRIS P5 TSL 1 (best) BASIC7.39□□□□□ -1.23
VPS9D1Q9Y2B5 WDR89-202ENST00000394942 2993 ntAPPRIS P1 TSL 5 BASIC7.39□□□□□ -1.23
VPS9D1Q9Y2B5 ADGRL3-207ENST00000507625 4843 ntAPPRIS ALT2 TSL 5 BASIC7.39□□□□□ -1.23
VPS9D1Q9Y2B5 ZNF532-223ENST00000591230 4450 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
VPS9D1Q9Y2B5 MIPOL1-204ENST00000539062 2389 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
VPS9D1Q9Y2B5 CU633906.1-201ENST00000621924 2380 ntTSL 3 BASIC7.39□□□□□ -1.23
VPS9D1Q9Y2B5 PKP4-217ENST00000628904 3856 ntTSL 5 BASIC7.39□□□□□ -1.23
VPS9D1Q9Y2B5 LINC00184-201ENST00000429269 2270 ntTSL 2 BASIC7.39□□□□□ -1.23
VPS9D1Q9Y2B5 TMEM132B-206ENST00000613307 9659 ntAPPRIS ALT2 TSL 1 (best) BASIC7.39□□□□□ -1.23
VPS9D1Q9Y2B5 PSMD5-AS1-213ENST00000640327 3531 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
VPS9D1Q9Y2B5 DDX18P3-201ENST00000404856 2007 ntBASIC7.39□□□□□ -1.23
VPS9D1Q9Y2B5 DNAJC6-203ENST00000395325 5743 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
VPS9D1Q9Y2B5 MS4A7-202ENST00000358246 2871 ntTSL 3 BASIC7.38□□□□□ -1.23
VPS9D1Q9Y2B5 PDE6A-205ENST00000617647 4039 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
VPS9D1Q9Y2B5 NOX1-204ENST00000372966 2529 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
VPS9D1Q9Y2B5 AC109361.1-201ENST00000513220 3526 ntTSL 2 BASIC7.38□□□□□ -1.23
VPS9D1Q9Y2B5 CFH-201ENST00000359637 1454 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
VPS9D1Q9Y2B5 AC069222.1-201ENST00000608028 3360 ntBASIC7.38□□□□□ -1.23
VPS9D1Q9Y2B5 SCEL-201ENST00000349847 2386 ntAPPRIS P4 TSL 1 (best) BASIC7.38□□□□□ -1.23
Retrieved 100 of 98,524 protein–RNA pairs in 73 ms