Protein–RNA interactions for Protein: Q9UPT8

ZC3H4, Zinc finger CCCH domain-containing protein 4, humanhuman

Known RBP Predictions only

Length 1,303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H4Q9UPT8 LRRC39-203ENST00000370138 1466 ntTSL 5 BASIC7.61□□□□□ -1.19
ZC3H4Q9UPT8 SERPINA9-204ENST00000424550 1462 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
ZC3H4Q9UPT8 AFTPH-205ENST00000422803 1525 ntTSL 5 BASIC7.61□□□□□ -1.19
ZC3H4Q9UPT8 WDR95P-201ENST00000425638 1542 ntBASIC7.61□□□□□ -1.19
ZC3H4Q9UPT8 ZNF532-224ENST00000591808 5171 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
ZC3H4Q9UPT8 APOOL-202ENST00000613473 6445 ntAPPRIS ALT1 TSL 5 BASIC7.61□□□□□ -1.19
ZC3H4Q9UPT8 TRIM6-205ENST00000445329 2951 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
ZC3H4Q9UPT8 RIPK1-202ENST00000380409 3864 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
ZC3H4Q9UPT8 AC007402.1-201ENST00000440698 3939 ntTSL 2 BASIC7.61□□□□□ -1.19
ZC3H4Q9UPT8 AC121758.1-201ENST00000557452 3942 ntTSL 2 BASIC7.61□□□□□ -1.19
ZC3H4Q9UPT8 UTP6-201ENST00000261708 4392 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
ZC3H4Q9UPT8 ZFHX3-207ENST00000641206 16414 ntAPPRIS P1 BASIC7.61□□□□□ -1.19
ZC3H4Q9UPT8 ABL2-201ENST00000344730 6910 ntAPPRIS ALT2 TSL 1 (best) BASIC7.61□□□□□ -1.19
ZC3H4Q9UPT8 CACNA1D-224ENST00000637424 6856 ntAPPRIS ALT2 TSL 5 BASIC7.61□□□□□ -1.19
ZC3H4Q9UPT8 AC011504.1-201ENST00000623331 4103 ntBASIC7.61□□□□□ -1.19
ZC3H4Q9UPT8 AGBL1-201ENST00000441037 3551 ntAPPRIS ALT2 TSL 5 BASIC7.6□□□□□ -1.19
ZC3H4Q9UPT8 CNOT4-205ENST00000423368 3297 ntAPPRIS ALT1 TSL 1 (best) BASIC7.6□□□□□ -1.19
ZC3H4Q9UPT8 KCNMA1-266ENST00000639601 11920 ntAPPRIS ALT2 TSL 5 BASIC7.6□□□□□ -1.19
ZC3H4Q9UPT8 CCDC171-201ENST00000380701 6512 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
ZC3H4Q9UPT8 FAM170B-AS1-203ENST00000442525 2000 ntTSL 2 BASIC7.6□□□□□ -1.19
ZC3H4Q9UPT8 MME-203ENST00000460393 5622 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
ZC3H4Q9UPT8 ARHGAP15-201ENST00000295095 1775 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
ZC3H4Q9UPT8 EED-203ENST00000351625 1696 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
ZC3H4Q9UPT8 ZNF735-201ENST00000429565 1570 ntAPPRIS P1 TSL 5 BASIC7.6□□□□□ -1.19
ZC3H4Q9UPT8 HNMT-201ENST00000280096 504 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
ZC3H4Q9UPT8 FAS-203ENST00000355279 983 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
ZC3H4Q9UPT8 RNU6-845P-201ENST00000362578 103 ntBASIC7.6□□□□□ -1.19
ZC3H4Q9UPT8 RNU4-7P-201ENST00000364758 141 ntBASIC7.6□□□□□ -1.19
ZC3H4Q9UPT8 OR1A2-201ENST00000381951 930 ntAPPRIS P1 BASIC7.6□□□□□ -1.19
ZC3H4Q9UPT8 MIR137-201ENST00000385223 102 ntBASIC7.6□□□□□ -1.19
ZC3H4Q9UPT8 AL049693.1-201ENST00000402760 611 ntBASIC7.6□□□□□ -1.19
ZC3H4Q9UPT8 AL603766.1-201ENST00000407763 664 ntBASIC7.6□□□□□ -1.19
ZC3H4Q9UPT8 RNA5SP156-201ENST00000410250 110 ntBASIC7.6□□□□□ -1.19
ZC3H4Q9UPT8 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC7.6□□□□□ -1.19
ZC3H4Q9UPT8 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC7.6□□□□□ -1.19
ZC3H4Q9UPT8 AL136133.1-201ENST00000413694 376 ntBASIC7.6□□□□□ -1.19
ZC3H4Q9UPT8 RAD23BP1-201ENST00000421404 1227 ntBASIC7.6□□□□□ -1.19
ZC3H4Q9UPT8 CYCSP52-201ENST00000422857 310 ntBASIC7.6□□□□□ -1.19
ZC3H4Q9UPT8 AL353729.1-201ENST00000425044 720 ntBASIC7.6□□□□□ -1.19
ZC3H4Q9UPT8 CYP4F32P-201ENST00000426492 504 ntBASIC7.6□□□□□ -1.19
ZC3H4Q9UPT8 TCF7L1-IT1-201ENST00000433581 458 ntTSL 3 BASIC7.6□□□□□ -1.19
ZC3H4Q9UPT8 AC009961.2-201ENST00000435771 251 ntBASIC7.6□□□□□ -1.19
ZC3H4Q9UPT8 AL121957.1-202ENST00000437040 329 ntTSL 3 BASIC7.6□□□□□ -1.19
ZC3H4Q9UPT8 AC073909.1-201ENST00000447112 999 ntBASIC7.6□□□□□ -1.19
ZC3H4Q9UPT8 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC7.6□□□□□ -1.19
ZC3H4Q9UPT8 Z82190.1-201ENST00000454534 490 ntBASIC7.6□□□□□ -1.19
ZC3H4Q9UPT8 AC018742.1-202ENST00000457901 504 ntTSL 3 BASIC7.6□□□□□ -1.19
ZC3H4Q9UPT8 RPS20P20-201ENST00000460498 340 ntBASIC7.6□□□□□ -1.19
ZC3H4Q9UPT8 RPL7P48-201ENST00000461513 746 ntBASIC7.6□□□□□ -1.19
ZC3H4Q9UPT8 RN7SL329P-201ENST00000467740 299 ntBASIC7.6□□□□□ -1.19
ZC3H4Q9UPT8 RN7SL826P-201ENST00000479724 288 ntBASIC7.6□□□□□ -1.19
ZC3H4Q9UPT8 RPL39P36-201ENST00000490784 156 ntBASIC7.6□□□□□ -1.19
ZC3H4Q9UPT8 AC090638.1-201ENST00000498296 909 ntBASIC7.6□□□□□ -1.19
ZC3H4Q9UPT8 ACTR3BP4-201ENST00000503033 1244 ntBASIC7.6□□□□□ -1.19
ZC3H4Q9UPT8 SNORA70.20-201ENST00000516848 126 ntBASIC7.6□□□□□ -1.19
ZC3H4Q9UPT8 WBP1LP3-201ENST00000523033 208 ntBASIC7.6□□□□□ -1.19
ZC3H4Q9UPT8 AC068587.4-201ENST00000533893 186 ntBASIC7.6□□□□□ -1.19
ZC3H4Q9UPT8 AC243972.3-201ENST00000539655 198 ntBASIC7.6□□□□□ -1.19
ZC3H4Q9UPT8 APPL2-203ENST00000546731 684 ntTSL 2 BASIC7.6□□□□□ -1.19
ZC3H4Q9UPT8 NACA-211ENST00000548563 827 ntTSL 5 BASIC7.6□□□□□ -1.19
ZC3H4Q9UPT8 AC106745.1-201ENST00000566798 464 ntTSL 2 BASIC7.6□□□□□ -1.19
ZC3H4Q9UPT8 ZNF28-207ENST00000594602 684 ntTSL 5 BASIC7.6□□□□□ -1.19
ZC3H4Q9UPT8 SSX4B-201ENST00000595235 1221 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
ZC3H4Q9UPT8 SSX4-201ENST00000595689 1221 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
ZC3H4Q9UPT8 IMMP1LP3-201ENST00000604197 224 ntBASIC7.6□□□□□ -1.19
ZC3H4Q9UPT8 Metazoa_SRP.199-201ENST00000615501 281 ntBASIC7.6□□□□□ -1.19
ZC3H4Q9UPT8 AC234782.5-201ENST00000617723 324 ntBASIC7.6□□□□□ -1.19
ZC3H4Q9UPT8 AC018628.1-201ENST00000624147 3819 ntBASIC7.6□□□□□ -1.19
ZC3H4Q9UPT8 BTN3A2-205ENST00000508906 3733 ntAPPRIS ALT2 TSL 2 BASIC7.6□□□□□ -1.19
ZC3H4Q9UPT8 GON4L-204ENST00000437809 7713 ntAPPRIS P3 TSL 5 BASIC7.6□□□□□ -1.19
ZC3H4Q9UPT8 DHX32-201ENST00000284690 3070 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
ZC3H4Q9UPT8 LRRTM4-205ENST00000409911 2976 ntAPPRIS ALT1 TSL 5 BASIC7.6□□□□□ -1.19
ZC3H4Q9UPT8 CSDE1-218ENST00000610726 4312 ntTSL 5 BASIC7.6□□□□□ -1.19
ZC3H4Q9UPT8 VEZF1-204ENST00000584396 2342 ntAPPRIS ALT2 TSL 5 BASIC7.6□□□□□ -1.19
ZC3H4Q9UPT8 BCL2L14-201ENST00000266434 2039 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
ZC3H4Q9UPT8 NSUN3-201ENST00000314622 3289 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
ZC3H4Q9UPT8 ZMAT1-206ENST00000540921 3139 ntAPPRIS P1 TSL 2 BASIC7.6□□□□□ -1.19
ZC3H4Q9UPT8 BLM-201ENST00000355112 5258 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
ZC3H4Q9UPT8 RGPD1-206ENST00000641458 5271 ntAPPRIS ALT2 BASIC7.6□□□□□ -1.19
ZC3H4Q9UPT8 CLUL1-205ENST00000579494 1742 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
ZC3H4Q9UPT8 GTSF1-209ENST00000552397 1621 ntAPPRIS P1 TSL 2 BASIC7.6□□□□□ -1.19
ZC3H4Q9UPT8 AP002026.1-201ENST00000500358 4825 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
ZC3H4Q9UPT8 CLIP4-202ENST00000401605 2322 ntTSL 2 BASIC7.59□□□□□ -1.19
ZC3H4Q9UPT8 SGK3-201ENST00000345714 4055 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
ZC3H4Q9UPT8 TCF7L2-220ENST00000543371 4037 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
ZC3H4Q9UPT8 MAGT1-204ENST00000610432 4019 ntAPPRIS P2 TSL 1 (best) BASIC7.59□□□□□ -1.19
ZC3H4Q9UPT8 NRCAM-204ENST00000379028 6685 ntAPPRIS ALT2 TSL 5 BASIC7.59□□□□□ -1.19
ZC3H4Q9UPT8 AC235565.1-201ENST00000456962 1325 ntBASIC7.59□□□□□ -1.19
ZC3H4Q9UPT8 GSTA3-201ENST00000211122 902 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
ZC3H4Q9UPT8 PLCZ1-201ENST00000266505 2148 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
ZC3H4Q9UPT8 REP15-201ENST00000310791 1078 ntAPPRIS P1 BASIC7.59□□□□□ -1.19
ZC3H4Q9UPT8 SNORD81.2-201ENST00000365153 76 ntBASIC7.59□□□□□ -1.19
ZC3H4Q9UPT8 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
ZC3H4Q9UPT8 OR52E6-202ENST00000379946 954 ntBASIC7.59□□□□□ -1.19
ZC3H4Q9UPT8 AL356432.1-201ENST00000405809 419 ntBASIC7.59□□□□□ -1.19
ZC3H4Q9UPT8 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC7.59□□□□□ -1.19
ZC3H4Q9UPT8 FO393401.1-203ENST00000416260 486 ntTSL 5 BASIC7.59□□□□□ -1.19
ZC3H4Q9UPT8 CR769775.2-201ENST00000417850 891 ntTSL 3 BASIC7.59□□□□□ -1.19
ZC3H4Q9UPT8 HMGB3P12-201ENST00000438745 556 ntBASIC7.59□□□□□ -1.19
ZC3H4Q9UPT8 HMGB3P9-201ENST00000441799 583 ntBASIC7.59□□□□□ -1.19
Retrieved 100 of 98,524 protein–RNA pairs in 100 ms