Protein–RNA interactions for Protein: Q9UPQ7

PDZRN3, E3 ubiquitin-protein ligase PDZRN3, humanhuman

Predictions only

Length 1,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3Q9UPQ7 CPSF7-220ENST00000541963 549 ntTSL 4 BASIC8.04□□□□□ -1.12
PDZRN3Q9UPQ7 AC007956.1-201ENST00000555623 542 ntBASIC8.04□□□□□ -1.12
PDZRN3Q9UPQ7 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC8.04□□□□□ -1.12
PDZRN3Q9UPQ7 AC130371.1-204ENST00000576197 401 ntTSL 3 BASIC8.04□□□□□ -1.12
PDZRN3Q9UPQ7 LAPTM4BP2-201ENST00000604542 446 ntBASIC8.04□□□□□ -1.12
PDZRN3Q9UPQ7 AC107214.2-201ENST00000608204 634 ntBASIC8.04□□□□□ -1.12
PDZRN3Q9UPQ7 Metazoa_SRP.134-201ENST00000610965 327 ntBASIC8.04□□□□□ -1.12
PDZRN3Q9UPQ7 RMST_3.1-201ENST00000611651 109 ntBASIC8.04□□□□□ -1.12
PDZRN3Q9UPQ7 AL132640.3-201ENST00000630473 177 ntBASIC8.04□□□□□ -1.12
PDZRN3Q9UPQ7 COPS7B-225ENST00000631349 189 ntTSL 5 BASIC8.04□□□□□ -1.12
PDZRN3Q9UPQ7 CBLB-205ENST00000407712 1493 ntTSL 2 BASIC8.04□□□□□ -1.12
PDZRN3Q9UPQ7 TRAPPC11-209ENST00000512476 2546 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
PDZRN3Q9UPQ7 AL359854.1-201ENST00000614203 1594 ntBASIC8.04□□□□□ -1.12
PDZRN3Q9UPQ7 LEPR-205ENST00000371060 5135 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
PDZRN3Q9UPQ7 CC2D2B-202ENST00000410012 1792 ntAPPRIS ALT2 TSL 2 BASIC8.04□□□□□ -1.12
PDZRN3Q9UPQ7 LINC01224-203ENST00000596283 2766 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
PDZRN3Q9UPQ7 FAM161A-202ENST00000404929 3762 ntAPPRIS ALT2 TSL 1 (best) BASIC8.04□□□□□ -1.12
PDZRN3Q9UPQ7 AL355306.2-205ENST00000635395 1646 ntTSL 5 BASIC8.03□□□□□ -1.12
PDZRN3Q9UPQ7 AP004289.1-201ENST00000436307 2205 ntBASIC8.03□□□□□ -1.12
PDZRN3Q9UPQ7 AC001226.2-204ENST00000638101 2645 ntAPPRIS ALT2 TSL 5 BASIC8.03□□□□□ -1.12
PDZRN3Q9UPQ7 MDM4-215ENST00000614459 9782 ntTSL 5 BASIC8.03□□□□□ -1.12
PDZRN3Q9UPQ7 MAPK10-270ENST00000641102 3538 ntBASIC8.03□□□□□ -1.12
PDZRN3Q9UPQ7 FTO-206ENST00000471389 11766 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
PDZRN3Q9UPQ7 CLCC1-205ENST00000369969 4343 ntTSL 5 BASIC8.03□□□□□ -1.12
PDZRN3Q9UPQ7 ZNF292-201ENST00000339907 8287 ntAPPRIS ALT1 TSL 5 BASIC8.03□□□□□ -1.12
PDZRN3Q9UPQ7 UVRAG-205ENST00000528420 2463 ntTSL 2 BASIC8.03□□□□□ -1.12
PDZRN3Q9UPQ7 OR4G1P-202ENST00000641173 1788 ntBASIC8.03□□□□□ -1.12
PDZRN3Q9UPQ7 NXF4-202ENST00000416098 1465 ntBASIC8.03□□□□□ -1.12
PDZRN3Q9UPQ7 FBXW12-204ENST00000445170 1379 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
PDZRN3Q9UPQ7 RNU6-501P-201ENST00000364072 100 ntBASIC8.03□□□□□ -1.12
PDZRN3Q9UPQ7 RNU6-374P-201ENST00000364146 108 ntBASIC8.03□□□□□ -1.12
PDZRN3Q9UPQ7 Y_RNA.259-201ENST00000364619 101 ntBASIC8.03□□□□□ -1.12
PDZRN3Q9UPQ7 Y_RNA.302-201ENST00000364997 102 ntBASIC8.03□□□□□ -1.12
PDZRN3Q9UPQ7 AL034376.1-201ENST00000380106 484 ntTSL 2 BASIC8.03□□□□□ -1.12
PDZRN3Q9UPQ7 RNA5SP284-201ENST00000384547 118 ntBASIC8.03□□□□□ -1.12
PDZRN3Q9UPQ7 HYKK-202ENST00000408962 847 ntTSL 5 BASIC8.03□□□□□ -1.12
PDZRN3Q9UPQ7 RNU6-908P-201ENST00000410160 94 ntBASIC8.03□□□□□ -1.12
PDZRN3Q9UPQ7 AL512353.1-202ENST00000416809 627 ntTSL 3 BASIC8.03□□□□□ -1.12
PDZRN3Q9UPQ7 B3GALNT1P1-201ENST00000420569 975 ntBASIC8.03□□□□□ -1.12
PDZRN3Q9UPQ7 LINC00382-201ENST00000427918 890 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
PDZRN3Q9UPQ7 MTND6P12-201ENST00000428247 522 ntBASIC8.03□□□□□ -1.12
PDZRN3Q9UPQ7 BRWD1P3-201ENST00000428816 390 ntBASIC8.03□□□□□ -1.12
PDZRN3Q9UPQ7 AP000295.1-201ENST00000433395 1000 ntAPPRIS P1 TSL 5 BASIC8.03□□□□□ -1.12
PDZRN3Q9UPQ7 FKBP7-205ENST00000434643 666 ntAPPRIS ALT2 TSL 1 (best) BASIC8.03□□□□□ -1.12
PDZRN3Q9UPQ7 AL592437.1-201ENST00000443781 492 ntBASIC8.03□□□□□ -1.12
PDZRN3Q9UPQ7 PPIAP7-201ENST00000454070 489 ntBASIC8.03□□□□□ -1.12
PDZRN3Q9UPQ7 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC8.03□□□□□ -1.12
PDZRN3Q9UPQ7 AP000620.1-201ENST00000527147 504 ntBASIC8.03□□□□□ -1.12
PDZRN3Q9UPQ7 AC007527.1-201ENST00000535528 313 ntTSL 2 BASIC8.03□□□□□ -1.12
PDZRN3Q9UPQ7 AC005000.1-201ENST00000536192 288 ntBASIC8.03□□□□□ -1.12
PDZRN3Q9UPQ7 AC090022.1-201ENST00000546569 311 ntBASIC8.03□□□□□ -1.12
PDZRN3Q9UPQ7 AC068305.2-201ENST00000550567 1205 ntBASIC8.03□□□□□ -1.12
PDZRN3Q9UPQ7 AC004825.1-201ENST00000555068 586 ntBASIC8.03□□□□□ -1.12
PDZRN3Q9UPQ7 AC087286.2-201ENST00000558980 660 ntTSL 3 BASIC8.03□□□□□ -1.12
PDZRN3Q9UPQ7 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC8.03□□□□□ -1.12
PDZRN3Q9UPQ7 HYKK-203ENST00000563233 734 ntTSL 2 BASIC8.03□□□□□ -1.12
PDZRN3Q9UPQ7 LINC01899-201ENST00000580323 312 ntTSL 5 BASIC8.03□□□□□ -1.12
PDZRN3Q9UPQ7 AC233702.7-202ENST00000582941 211 ntBASIC8.03□□□□□ -1.12
PDZRN3Q9UPQ7 SNHG8-202ENST00000602483 309 ntTSL 3 BASIC8.03□□□□□ -1.12
PDZRN3Q9UPQ7 AC103710.1-201ENST00000610003 901 ntBASIC8.03□□□□□ -1.12
PDZRN3Q9UPQ7 AC068880.5-201ENST00000624331 290 ntBASIC8.03□□□□□ -1.12
PDZRN3Q9UPQ7 LINC00702-203ENST00000608792 6300 ntTSL 4 BASIC8.03□□□□□ -1.12
PDZRN3Q9UPQ7 POT1-202ENST00000393329 3950 ntTSL 5 BASIC8.03□□□□□ -1.12
PDZRN3Q9UPQ7 CACNA1E-210ENST00000621791 16171 ntAPPRIS ALT2 TSL 1 (best) BASIC8.03□□□□□ -1.12
PDZRN3Q9UPQ7 TCF4-278ENST00000636400 8343 ntTSL 5 BASIC8.03□□□□□ -1.12
PDZRN3Q9UPQ7 SEC61A2-202ENST00000304267 2030 ntTSL 2 BASIC8.03□□□□□ -1.12
PDZRN3Q9UPQ7 SLC16A6-201ENST00000327268 3807 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
PDZRN3Q9UPQ7 AC079298.1-201ENST00000625026 1619 ntBASIC8.03□□□□□ -1.12
PDZRN3Q9UPQ7 MATR3-215ENST00000510056 3040 ntTSL 5 BASIC8.03□□□□□ -1.12
PDZRN3Q9UPQ7 SCYL3-201ENST00000367770 2916 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.12
PDZRN3Q9UPQ7 TLR10-208ENST00000622002 3673 ntAPPRIS P1 TSL 3 BASIC8.02□□□□□ -1.12
PDZRN3Q9UPQ7 IGIP-201ENST00000333305 3458 ntAPPRIS P1 BASIC8.02□□□□□ -1.12
PDZRN3Q9UPQ7 GALNT5-201ENST00000259056 6171 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.12
PDZRN3Q9UPQ7 CUBNP3-201ENST00000457461 1784 ntBASIC8.02□□□□□ -1.13
PDZRN3Q9UPQ7 MUC5AC-201ENST00000621226 17448 ntAPPRIS P1 TSL 5 BASIC8.02□□□□□ -1.13
PDZRN3Q9UPQ7 MTRNR2L11-201ENST00000604646 1552 ntAPPRIS P1 BASIC8.02□□□□□ -1.13
PDZRN3Q9UPQ7 AC011369.2-201ENST00000624423 1567 ntBASIC8.02□□□□□ -1.13
PDZRN3Q9UPQ7 HOMEZ-203ENST00000561013 3337 ntAPPRIS ALT2 TSL 2 BASIC8.02□□□□□ -1.13
PDZRN3Q9UPQ7 PRRC1-202ENST00000442138 5504 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
PDZRN3Q9UPQ7 STS-201ENST00000217961 6521 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
PDZRN3Q9UPQ7 FSCB-201ENST00000340446 2938 ntAPPRIS P1 BASIC8.02□□□□□ -1.13
PDZRN3Q9UPQ7 CSMD2-206ENST00000373388 13118 ntAPPRIS P3 TSL 1 (best) BASIC8.02□□□□□ -1.13
PDZRN3Q9UPQ7 RPL6-201ENST00000202773 947 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
PDZRN3Q9UPQ7 OR5AN1-201ENST00000313940 1037 ntAPPRIS P1 BASIC8.02□□□□□ -1.13
PDZRN3Q9UPQ7 SNORD16-201ENST00000362803 99 ntBASIC8.02□□□□□ -1.13
PDZRN3Q9UPQ7 Y_RNA.149-201ENST00000363558 117 ntBASIC8.02□□□□□ -1.13
PDZRN3Q9UPQ7 SNORD8-201ENST00000363915 110 ntBASIC8.02□□□□□ -1.13
PDZRN3Q9UPQ7 Y_RNA.291-201ENST00000364886 113 ntBASIC8.02□□□□□ -1.13
PDZRN3Q9UPQ7 SNORA70H-201ENST00000383910 135 ntBASIC8.02□□□□□ -1.13
PDZRN3Q9UPQ7 SNORA70J-201ENST00000384182 135 ntBASIC8.02□□□□□ -1.13
PDZRN3Q9UPQ7 MTCYBP36-201ENST00000404146 440 ntBASIC8.02□□□□□ -1.13
PDZRN3Q9UPQ7 AC116036.1-201ENST00000412199 367 ntBASIC8.02□□□□□ -1.13
PDZRN3Q9UPQ7 RPL12P12-201ENST00000424633 501 ntBASIC8.02□□□□□ -1.13
PDZRN3Q9UPQ7 AL445669.1-201ENST00000426743 755 ntBASIC8.02□□□□□ -1.13
PDZRN3Q9UPQ7 AC003989.1-201ENST00000434569 565 ntBASIC8.02□□□□□ -1.13
PDZRN3Q9UPQ7 ATP5LP2-201ENST00000440646 311 ntBASIC8.02□□□□□ -1.13
PDZRN3Q9UPQ7 AL161621.1-201ENST00000444796 340 ntTSL 3 BASIC8.02□□□□□ -1.13
PDZRN3Q9UPQ7 LINC01880-201ENST00000446593 561 ntTSL 4 BASIC8.02□□□□□ -1.13
PDZRN3Q9UPQ7 AC092967.1-201ENST00000449016 481 ntBASIC8.02□□□□□ -1.13
PDZRN3Q9UPQ7 CYCSP42-201ENST00000450823 238 ntBASIC8.02□□□□□ -1.13
Retrieved 100 of 98,524 protein–RNA pairs in 153.8 ms