Protein–RNA interactions for Protein: Q9UIU6

SIX4, Homeobox protein SIX4, humanhuman

Predictions only

Length 781 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4Q9UIU6 C1orf143-202ENST00000491260 813 ntTSL 3 BASIC4.85□□□□□ -1.63
SIX4Q9UIU6 RPS4XP18-201ENST00000495480 763 ntBASIC4.85□□□□□ -1.63
SIX4Q9UIU6 AC005699.1-205ENST00000510639 427 ntTSL 2 BASIC4.85□□□□□ -1.63
SIX4Q9UIU6 AC133963.2-201ENST00000513686 578 ntBASIC4.85□□□□□ -1.63
SIX4Q9UIU6 AC110760.1-201ENST00000513770 590 ntTSL 3 BASIC4.85□□□□□ -1.63
SIX4Q9UIU6 LINC01609-201ENST00000519506 424 ntTSL 3 BASIC4.85□□□□□ -1.63
SIX4Q9UIU6 AC093331.2-201ENST00000520459 677 ntTSL 3 BASIC4.85□□□□□ -1.63
SIX4Q9UIU6 AC034205.1-201ENST00000520621 638 ntBASIC4.85□□□□□ -1.63
SIX4Q9UIU6 AP003472.2-201ENST00000523554 639 ntTSL 3 BASIC4.85□□□□□ -1.63
SIX4Q9UIU6 OR8A2P-201ENST00000528631 952 ntBASIC4.85□□□□□ -1.63
SIX4Q9UIU6 AP000916.1-201ENST00000533869 835 ntBASIC4.85□□□□□ -1.63
SIX4Q9UIU6 LINC02399-201ENST00000547094 400 ntTSL 2 BASIC4.85□□□□□ -1.63
SIX4Q9UIU6 AC004801.3-201ENST00000547602 962 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
SIX4Q9UIU6 LINC02394-201ENST00000549140 543 ntTSL 4 BASIC4.85□□□□□ -1.63
SIX4Q9UIU6 OR11H7-201ENST00000553765 945 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
SIX4Q9UIU6 AC112693.1-201ENST00000555297 682 ntTSL 3 BASIC4.85□□□□□ -1.63
SIX4Q9UIU6 AP000919.1-202ENST00000581139 1264 ntBASIC4.85□□□□□ -1.63
SIX4Q9UIU6 AL357094.1-201ENST00000603845 844 ntBASIC4.85□□□□□ -1.63
SIX4Q9UIU6 AC020634.1-201ENST00000608701 549 ntBASIC4.85□□□□□ -1.63
SIX4Q9UIU6 AL159169.2-201ENST00000610061 1269 ntBASIC4.85□□□□□ -1.63
SIX4Q9UIU6 RNU6-1192P-201ENST00000612197 107 ntBASIC4.85□□□□□ -1.63
SIX4Q9UIU6 AC140725.3-201ENST00000616193 880 ntBASIC4.85□□□□□ -1.63
SIX4Q9UIU6 RNU6-489P-201ENST00000618289 107 ntBASIC4.85□□□□□ -1.63
SIX4Q9UIU6 OR51F1-202ENST00000624103 939 ntAPPRIS ALT1 BASIC4.85□□□□□ -1.63
SIX4Q9UIU6 MIR7641-1-201ENST00000627518 61 ntBASIC4.85□□□□□ -1.63
SIX4Q9UIU6 AC006994.2-202ENST00000639259 3828 ntTSL 5 BASIC4.85□□□□□ -1.63
SIX4Q9UIU6 AC008432.1-201ENST00000615912 1320 ntBASIC4.85□□□□□ -1.63
SIX4Q9UIU6 NFE2L2-204ENST00000423513 1382 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
SIX4Q9UIU6 ARHGAP21-218ENST00000636789 4210 ntTSL 2 BASIC4.85□□□□□ -1.63
SIX4Q9UIU6 AC120338.1-201ENST00000625074 1541 ntBASIC4.85□□□□□ -1.63
SIX4Q9UIU6 CD96-203ENST00000438817 1565 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
SIX4Q9UIU6 AC139713.2-214ENST00000642059 1811 ntBASIC4.85□□□□□ -1.63
SIX4Q9UIU6 AL731566.1-201ENST00000620490 1937 ntBASIC4.85□□□□□ -1.63
SIX4Q9UIU6 CASC17-201ENST00000569074 2059 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
SIX4Q9UIU6 SYNE2-203ENST00000357395 21555 ntTSL 5 BASIC4.85□□□□□ -1.63
SIX4Q9UIU6 MYBPC1-208ENST00000547405 3834 ntAPPRIS ALT2 TSL 1 (best) BASIC4.85□□□□□ -1.63
SIX4Q9UIU6 PIK3C3-201ENST00000262039 9443 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
SIX4Q9UIU6 DCN-201ENST00000052754 7156 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
SIX4Q9UIU6 SYT16-205ENST00000568344 13978 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
SIX4Q9UIU6 EMSY-207ENST00000525919 4074 ntAPPRIS ALT1 TSL 1 (best) BASIC4.84□□□□□ -1.63
SIX4Q9UIU6 CTAGE5-208ENST00000553352 3441 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
SIX4Q9UIU6 SNCA-213ENST00000618500 3022 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
SIX4Q9UIU6 UBR1-201ENST00000290650 7761 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
SIX4Q9UIU6 NME8-203ENST00000440017 1879 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
SIX4Q9UIU6 ESCO1-204ENST00000622333 1850 ntTSL 2 BASIC4.84□□□□□ -1.63
SIX4Q9UIU6 FGF12-204ENST00000445105 5406 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
SIX4Q9UIU6 ACTR3BP2-202ENST00000623630 1338 ntBASIC4.84□□□□□ -1.63
SIX4Q9UIU6 CFHR4-203ENST00000367418 1066 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
SIX4Q9UIU6 AL354733.1-203ENST00000417672 495 ntTSL 5 BASIC4.84□□□□□ -1.63
SIX4Q9UIU6 AL139095.3-201ENST00000419672 1203 ntBASIC4.84□□□□□ -1.63
SIX4Q9UIU6 AL020993.1-201ENST00000420172 297 ntTSL 3 BASIC4.84□□□□□ -1.63
SIX4Q9UIU6 TTTY21B-201ENST00000421353 307 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
SIX4Q9UIU6 TTTY21-201ENST00000430228 307 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
SIX4Q9UIU6 MTCO1P43-201ENST00000431831 488 ntBASIC4.84□□□□□ -1.63
SIX4Q9UIU6 MED6P1-201ENST00000439659 713 ntBASIC4.84□□□□□ -1.63
SIX4Q9UIU6 AL589765.3-201ENST00000446084 462 ntBASIC4.84□□□□□ -1.63
SIX4Q9UIU6 AL512380.1-202ENST00000447728 543 ntTSL 5 BASIC4.84□□□□□ -1.63
SIX4Q9UIU6 AL354771.1-201ENST00000452178 602 ntTSL 5 BASIC4.84□□□□□ -1.63
SIX4Q9UIU6 MTND2P28-201ENST00000457540 1044 ntBASIC4.84□□□□□ -1.63
SIX4Q9UIU6 AL139824.2-201ENST00000458731 1095 ntBASIC4.84□□□□□ -1.63
SIX4Q9UIU6 RPL5P13-201ENST00000462840 709 ntBASIC4.84□□□□□ -1.63
SIX4Q9UIU6 AC013356.1-201ENST00000489027 564 ntBASIC4.84□□□□□ -1.63
SIX4Q9UIU6 AC098862.1-201ENST00000504991 413 ntBASIC4.84□□□□□ -1.63
SIX4Q9UIU6 AC139718.2-201ENST00000506068 481 ntTSL 3 BASIC4.84□□□□□ -1.63
SIX4Q9UIU6 AC096734.1-201ENST00000511279 1128 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
SIX4Q9UIU6 AC010376.1-201ENST00000522101 334 ntBASIC4.84□□□□□ -1.63
SIX4Q9UIU6 AL121852.1-201ENST00000554665 430 ntTSL 3 BASIC4.84□□□□□ -1.63
SIX4Q9UIU6 AL359237.1-202ENST00000556168 487 ntTSL 5 BASIC4.84□□□□□ -1.63
SIX4Q9UIU6 AC018552.1-201ENST00000562099 811 ntBASIC4.84□□□□□ -1.63
SIX4Q9UIU6 AC009712.1-201ENST00000564938 316 ntBASIC4.84□□□□□ -1.63
SIX4Q9UIU6 MIR4509-3-201ENST00000578671 94 ntBASIC4.84□□□□□ -1.63
SIX4Q9UIU6 MIR4509-2-201ENST00000583920 94 ntBASIC4.84□□□□□ -1.63
SIX4Q9UIU6 ZNF540-204ENST00000586792 564 ntTSL 3 BASIC4.84□□□□□ -1.63
SIX4Q9UIU6 MTCO2P2-201ENST00000591258 225 ntBASIC4.84□□□□□ -1.63
SIX4Q9UIU6 LINC00907-210ENST00000593316 847 ntTSL 3 BASIC4.84□□□□□ -1.63
SIX4Q9UIU6 AL606834.3-201ENST00000602615 496 ntBASIC4.84□□□□□ -1.63
SIX4Q9UIU6 BPIFA4P-203ENST00000603168 689 ntBASIC4.84□□□□□ -1.63
SIX4Q9UIU6 AL445435.1-201ENST00000604232 665 ntBASIC4.84□□□□□ -1.63
SIX4Q9UIU6 LINC00397-202ENST00000606785 409 ntTSL 5 BASIC4.84□□□□□ -1.63
SIX4Q9UIU6 AC234782.5-201ENST00000617723 324 ntBASIC4.84□□□□□ -1.63
SIX4Q9UIU6 MIR4509-1-201ENST00000618224 94 ntBASIC4.84□□□□□ -1.63
SIX4Q9UIU6 AC092683.2-201ENST00000619740 621 ntTSL 3 BASIC4.84□□□□□ -1.63
SIX4Q9UIU6 AC105105.5-201ENST00000622635 1294 ntBASIC4.84□□□□□ -1.63
SIX4Q9UIU6 AL109659.3-201ENST00000624985 950 ntBASIC4.84□□□□□ -1.63
SIX4Q9UIU6 VIPR1-AS1-223ENST00000627073 451 ntTSL 5 BASIC4.84□□□□□ -1.63
SIX4Q9UIU6 CHRM3-AS2-209ENST00000628573 766 ntTSL 5 BASIC4.84□□□□□ -1.63
SIX4Q9UIU6 GOLT1B-210ENST00000631252 223 ntTSL 3 BASIC4.84□□□□□ -1.63
SIX4Q9UIU6 DDAH1-206ENST00000633113 703 ntTSL 2 BASIC4.84□□□□□ -1.63
SIX4Q9UIU6 RBMS1-202ENST00000392753 3781 ntTSL 5 BASIC4.84□□□□□ -1.63
SIX4Q9UIU6 ZNF33A-201ENST00000307441 6196 ntAPPRIS ALT2 TSL 4 BASIC4.84□□□□□ -1.63
SIX4Q9UIU6 FAM197Y9-201ENST00000451062 2332 ntTSL 5 BASIC4.84□□□□□ -1.64
SIX4Q9UIU6 OMG-201ENST00000247271 1947 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.64
SIX4Q9UIU6 ADGRL2-204ENST00000370715 5585 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
SIX4Q9UIU6 MTND5P11-201ENST00000511037 1812 ntBASIC4.83□□□□□ -1.64
SIX4Q9UIU6 EXO1-208ENST00000518483 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC4.83□□□□□ -1.64
SIX4Q9UIU6 EPHA3-202ENST00000452448 2546 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
SIX4Q9UIU6 ODAM-201ENST00000396094 1319 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
SIX4Q9UIU6 RNA5SP447-201ENST00000363749 119 ntBASIC4.83□□□□□ -1.64
SIX4Q9UIU6 TMSB10P2-201ENST00000416049 131 ntBASIC4.83□□□□□ -1.64
SIX4Q9UIU6 MOBP-206ENST00000428261 561 ntAPPRIS ALT2 TSL 4 BASIC4.83□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 79 ms