Protein–RNA interactions for Protein: Q9UBP4

DKK3, Dickkopf-related protein 3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DKK3Q9UBP4 CT45A3-201ENST00000597510 1076 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
DKK3Q9UBP4 MIR4527HG-203ENST00000600127 704 ntTSL 5 BASIC5.31□□□□□ -1.56
DKK3Q9UBP4 AC021749.1-201ENST00000604322 607 ntBASIC5.31□□□□□ -1.56
DKK3Q9UBP4 AC009597.2-201ENST00000604659 592 ntBASIC5.31□□□□□ -1.56
DKK3Q9UBP4 AL162431.4-201ENST00000604674 411 ntBASIC5.31□□□□□ -1.56
DKK3Q9UBP4 CT45A2-201ENST00000605791 1076 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
DKK3Q9UBP4 AC090425.2-201ENST00000608818 501 ntBASIC5.31□□□□□ -1.56
DKK3Q9UBP4 AC007786.3-201ENST00000615154 596 ntBASIC5.31□□□□□ -1.56
DKK3Q9UBP4 AP004607.9-201ENST00000618202 316 ntBASIC5.31□□□□□ -1.56
DKK3Q9UBP4 AC007490.1-201ENST00000624321 703 ntBASIC5.31□□□□□ -1.56
DKK3Q9UBP4 GOLT1B-210ENST00000631252 223 ntTSL 3 BASIC5.31□□□□□ -1.56
DKK3Q9UBP4 OR2M2-202ENST00000641211 1229 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
DKK3Q9UBP4 ASB14-201ENST00000389601 3175 ntAPPRIS ALT2 TSL 5 BASIC5.31□□□□□ -1.56
DKK3Q9UBP4 PCDH15-209ENST00000395433 6942 ntTSL 5 BASIC5.31□□□□□ -1.56
DKK3Q9UBP4 INPP4B-220ENST00000513000 8831 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
DKK3Q9UBP4 SPAM1-201ENST00000223028 2007 ntAPPRIS ALT2 TSL 5 BASIC5.31□□□□□ -1.56
DKK3Q9UBP4 DDX18P3-201ENST00000404856 2007 ntBASIC5.31□□□□□ -1.56
DKK3Q9UBP4 SPOCK3-225ENST00000535728 2007 ntAPPRIS ALT2 TSL 5 BASIC5.31□□□□□ -1.56
DKK3Q9UBP4 AC003973.3-201ENST00000624863 2822 ntBASIC5.31□□□□□ -1.56
DKK3Q9UBP4 ZNF181-203ENST00000459757 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.56
DKK3Q9UBP4 EPB41L2-226ENST00000530757 4360 ntTSL 2 BASIC5.31□□□□□ -1.56
DKK3Q9UBP4 CXCL9-201ENST00000264888 2740 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
DKK3Q9UBP4 LINC01625-201ENST00000454788 1690 ntTSL 2 BASIC5.31□□□□□ -1.56
DKK3Q9UBP4 RUFY3-201ENST00000226328 4233 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
DKK3Q9UBP4 DYNC1I2-207ENST00000410079 2159 ntTSL 2 BASIC5.31□□□□□ -1.56
DKK3Q9UBP4 IL1RAPL1-202ENST00000378993 3667 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
DKK3Q9UBP4 VPS13C-204ENST00000395898 11012 ntAPPRIS ALT2 TSL 1 (best) BASIC5.3□□□□□ -1.56
DKK3Q9UBP4 AC008691.1-207ENST00000636819 4154 ntTSL 5 BASIC5.3□□□□□ -1.56
DKK3Q9UBP4 CFHR3-201ENST00000367425 1645 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
DKK3Q9UBP4 IL1R1-204ENST00000409929 1858 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
DKK3Q9UBP4 Z95327.2-201ENST00000414579 1873 ntBASIC5.3□□□□□ -1.56
DKK3Q9UBP4 EMCN-209ENST00000511970 1377 ntAPPRIS ALT2 TSL 2 BASIC5.3□□□□□ -1.56
DKK3Q9UBP4 EXO1-208ENST00000518483 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC5.3□□□□□ -1.56
DKK3Q9UBP4 PTPRD-202ENST00000356435 9472 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
DKK3Q9UBP4 CASC19-204ENST00000641001 2055 ntBASIC5.3□□□□□ -1.56
DKK3Q9UBP4 DCLRE1A-201ENST00000361384 4468 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
DKK3Q9UBP4 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
DKK3Q9UBP4 RRP15-201ENST00000366932 7771 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
DKK3Q9UBP4 CLHC1-203ENST00000406076 1777 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
DKK3Q9UBP4 VPS13D-214ENST00000620676 16320 ntAPPRIS P4 TSL 1 (best) BASIC5.3□□□□□ -1.56
DKK3Q9UBP4 ERVW-1-201ENST00000493463 2925 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
DKK3Q9UBP4 OBSCN-210ENST00000570156 26925 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
DKK3Q9UBP4 FNIP1-202ENST00000307968 6388 ntAPPRIS ALT2 TSL 5 BASIC5.3□□□□□ -1.56
DKK3Q9UBP4 OR5T3-202ENST00000313033 969 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
DKK3Q9UBP4 FAS-205ENST00000357339 1044 ntAPPRIS ALT2 TSL 1 (best) BASIC5.3□□□□□ -1.56
DKK3Q9UBP4 U8.4-201ENST00000363626 134 ntBASIC5.3□□□□□ -1.56
DKK3Q9UBP4 RN7SKP153-201ENST00000365026 316 ntBASIC5.3□□□□□ -1.56
DKK3Q9UBP4 PAGE2B-202ENST00000374974 456 ntTSL 5 BASIC5.3□□□□□ -1.56
DKK3Q9UBP4 OR6C3-201ENST00000379667 936 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
DKK3Q9UBP4 AC019155.1-201ENST00000382242 574 ntBASIC5.3□□□□□ -1.56
DKK3Q9UBP4 AC093719.1-202ENST00000392735 373 ntBASIC5.3□□□□□ -1.56
DKK3Q9UBP4 Z86062.2-201ENST00000411442 380 ntTSL 5 BASIC5.3□□□□□ -1.56
DKK3Q9UBP4 MTND4P22-201ENST00000413116 1169 ntBASIC5.3□□□□□ -1.56
DKK3Q9UBP4 RPL23AP27-201ENST00000415161 451 ntBASIC5.3□□□□□ -1.56
DKK3Q9UBP4 USP9YP26-201ENST00000421008 661 ntBASIC5.3□□□□□ -1.56
DKK3Q9UBP4 SLC9B1P4-201ENST00000421957 1288 ntBASIC5.3□□□□□ -1.56
DKK3Q9UBP4 AC246680.2-201ENST00000422106 389 ntBASIC5.3□□□□□ -1.56
DKK3Q9UBP4 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC5.3□□□□□ -1.56
DKK3Q9UBP4 AC093716.1-201ENST00000435923 377 ntBASIC5.3□□□□□ -1.56
DKK3Q9UBP4 YWHAZP2-201ENST00000440317 728 ntBASIC5.3□□□□□ -1.56
DKK3Q9UBP4 AL137076.1-201ENST00000441046 551 ntTSL 2 BASIC5.3□□□□□ -1.56
DKK3Q9UBP4 AC064871.1-201ENST00000444562 427 ntTSL 3 BASIC5.3□□□□□ -1.56
DKK3Q9UBP4 ZNF736P5Y-201ENST00000451173 805 ntBASIC5.3□□□□□ -1.56
DKK3Q9UBP4 AURKAPS1-201ENST00000451805 1212 ntBASIC5.3□□□□□ -1.56
DKK3Q9UBP4 AP001596.1-202ENST00000452460 644 ntTSL 3 BASIC5.3□□□□□ -1.56
DKK3Q9UBP4 AC073387.1-201ENST00000453261 709 ntBASIC5.3□□□□□ -1.56
DKK3Q9UBP4 CCDC75P1-201ENST00000469247 791 ntBASIC5.3□□□□□ -1.56
DKK3Q9UBP4 RPS3AP43-201ENST00000479743 781 ntBASIC5.3□□□□□ -1.56
DKK3Q9UBP4 CEACAMP10-202ENST00000495431 496 ntBASIC5.3□□□□□ -1.56
DKK3Q9UBP4 RPL15P21-201ENST00000495592 567 ntBASIC5.3□□□□□ -1.56
DKK3Q9UBP4 AC008953.1-201ENST00000497334 318 ntBASIC5.3□□□□□ -1.56
DKK3Q9UBP4 IGBP1P4-201ENST00000503202 879 ntBASIC5.3□□□□□ -1.56
DKK3Q9UBP4 AC008591.1-201ENST00000503616 631 ntTSL 3 BASIC5.3□□□□□ -1.56
DKK3Q9UBP4 ENPP7P11-201ENST00000505915 627 ntBASIC5.3□□□□□ -1.56
DKK3Q9UBP4 AC097515.1-202ENST00000511818 371 ntTSL 3 BASIC5.3□□□□□ -1.56
DKK3Q9UBP4 HMGN1P9-201ENST00000515212 298 ntBASIC5.3□□□□□ -1.56
DKK3Q9UBP4 AC012400.1-201ENST00000518452 381 ntBASIC5.3□□□□□ -1.56
DKK3Q9UBP4 AC124067.3-201ENST00000522643 847 ntTSL 3 BASIC5.3□□□□□ -1.56
DKK3Q9UBP4 CASP1-206ENST00000526568 1061 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
DKK3Q9UBP4 KCTD21-AS1-206ENST00000532831 856 ntTSL 2 BASIC5.3□□□□□ -1.56
DKK3Q9UBP4 CASP1-216ENST00000534497 825 ntTSL 5 BASIC5.3□□□□□ -1.56
DKK3Q9UBP4 LYZ-203ENST00000549690 669 ntTSL 2 BASIC5.3□□□□□ -1.56
DKK3Q9UBP4 CR383656.6-201ENST00000550518 394 ntBASIC5.3□□□□□ -1.56
DKK3Q9UBP4 HMGN2P6-201ENST00000551091 273 ntBASIC5.3□□□□□ -1.56
DKK3Q9UBP4 LINC01619-209ENST00000552277 571 ntTSL 4 BASIC5.3□□□□□ -1.56
DKK3Q9UBP4 AL035071.2-201ENST00000565572 459 ntTSL 3 BASIC5.3□□□□□ -1.56
DKK3Q9UBP4 AC012181.3-201ENST00000565861 601 ntTSL 4 BASIC5.3□□□□□ -1.56
DKK3Q9UBP4 MIR3691-201ENST00000578066 90 ntBASIC5.3□□□□□ -1.56
DKK3Q9UBP4 AP005120.1-201ENST00000579321 352 ntTSL 3 BASIC5.3□□□□□ -1.56
DKK3Q9UBP4 AP005119.2-201ENST00000579735 1105 ntBASIC5.3□□□□□ -1.56
DKK3Q9UBP4 AC242426.3-203ENST00000606757 712 ntTSL 3 BASIC5.3□□□□□ -1.56
DKK3Q9UBP4 AC080013.3-201ENST00000606839 578 ntBASIC5.3□□□□□ -1.56
DKK3Q9UBP4 AC010632.3-201ENST00000611377 369 ntBASIC5.3□□□□□ -1.56
DKK3Q9UBP4 AL356274.1-201ENST00000617064 410 ntBASIC5.3□□□□□ -1.56
DKK3Q9UBP4 AC131238.1-201ENST00000617135 328 ntBASIC5.3□□□□□ -1.56
DKK3Q9UBP4 CGA-204ENST00000627148 1010 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
DKK3Q9UBP4 CFI-202ENST00000394635 2053 ntAPPRIS ALT2 TSL 2 BASIC5.3□□□□□ -1.56
DKK3Q9UBP4 ZNF492-201ENST00000456783 4245 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
DKK3Q9UBP4 LINC02203-203ENST00000625989 1600 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
DKK3Q9UBP4 CEP162-207ENST00000617909 5095 ntTSL 5 BASIC5.3□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 77.8 ms