Protein–RNA interactions for Protein: Q9P218

COL20A1, Collagen alpha-1(XX) chain, humanhuman

Predictions only

Length 1,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1Q9P218 MTATP6P15-201ENST00000527233 835 ntBASIC5.5□□□□□ -1.53
COL20A1Q9P218 PIH1D2-206ENST00000528775 1025 ntTSL 5 BASIC5.5□□□□□ -1.53
COL20A1Q9P218 RRAS2-205ENST00000529237 1278 ntTSL 2 BASIC5.5□□□□□ -1.53
COL20A1Q9P218 AC073487.1-201ENST00000547009 529 ntTSL 4 BASIC5.5□□□□□ -1.53
COL20A1Q9P218 AC133555.2-201ENST00000550213 292 ntBASIC5.5□□□□□ -1.53
COL20A1Q9P218 MRPS36P5-201ENST00000551909 298 ntBASIC5.5□□□□□ -1.53
COL20A1Q9P218 AC093249.4-201ENST00000564755 259 ntBASIC5.5□□□□□ -1.53
COL20A1Q9P218 MTND4LP24-201ENST00000572277 291 ntBASIC5.5□□□□□ -1.53
COL20A1Q9P218 MTCO1P40-201ENST00000574371 625 ntBASIC5.5□□□□□ -1.53
COL20A1Q9P218 AC002091.1-201ENST00000578788 557 ntTSL 2 BASIC5.5□□□□□ -1.53
COL20A1Q9P218 MIR5699-201ENST00000578903 90 ntBASIC5.5□□□□□ -1.53
COL20A1Q9P218 VN1R84P-201ENST00000593697 235 ntBASIC5.5□□□□□ -1.53
COL20A1Q9P218 AL020997.3-201ENST00000602843 359 ntBASIC5.5□□□□□ -1.53
COL20A1Q9P218 uc_338.9-201ENST00000617424 182 ntBASIC5.5□□□□□ -1.53
COL20A1Q9P218 U6.48-201ENST00000618523 106 ntBASIC5.5□□□□□ -1.53
COL20A1Q9P218 LGI1-209ENST00000627699 664 ntTSL 3 BASIC5.5□□□□□ -1.53
COL20A1Q9P218 DYRK1A-202ENST00000339659 8654 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
COL20A1Q9P218 SASS6-201ENST00000287482 3880 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
COL20A1Q9P218 KCNH5-201ENST00000322893 11290 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
COL20A1Q9P218 LCMT1-AS2-202ENST00000565214 5666 ntBASIC5.5□□□□□ -1.53
COL20A1Q9P218 ZNF639-210ENST00000621687 1458 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
COL20A1Q9P218 AC010266.2-201ENST00000564741 3255 ntBASIC5.5□□□□□ -1.53
COL20A1Q9P218 COPB2-205ENST00000507777 3034 ntTSL 2 BASIC5.5□□□□□ -1.53
COL20A1Q9P218 CDON-206ENST00000531738 5803 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
COL20A1Q9P218 WDR35-202ENST00000345530 6960 ntAPPRIS ALT1 TSL 1 (best) BASIC5.49□□□□□ -1.53
COL20A1Q9P218 WAC-209ENST00000428935 1320 ntTSL 2 BASIC5.49□□□□□ -1.53
COL20A1Q9P218 NCOA3-203ENST00000372004 7939 ntAPPRIS ALT2 TSL 1 (best) BASIC5.49□□□□□ -1.53
COL20A1Q9P218 RAPGEF2-201ENST00000264431 6949 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
COL20A1Q9P218 MUC12-206ENST00000536621 16321 ntAPPRIS P2 TSL 5 BASIC5.49□□□□□ -1.53
COL20A1Q9P218 MAMDC2-AS1-201ENST00000377178 1504 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
COL20A1Q9P218 SLC9B1-202ENST00000394789 1735 ntAPPRIS ALT2 TSL 1 (best) BASIC5.49□□□□□ -1.53
COL20A1Q9P218 ADAM5-202ENST00000399789 1942 ntBASIC5.49□□□□□ -1.53
COL20A1Q9P218 C5orf42-201ENST00000425232 11199 ntAPPRIS P2 TSL 5 BASIC5.49□□□□□ -1.53
COL20A1Q9P218 DNAJC12-201ENST00000225171 1201 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
COL20A1Q9P218 RNU1-32P-201ENST00000363937 159 ntBASIC5.49□□□□□ -1.53
COL20A1Q9P218 R3HCC1L-204ENST00000370586 941 ntTSL 3 BASIC5.49□□□□□ -1.53
COL20A1Q9P218 EIF1AY-202ENST00000382772 746 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
COL20A1Q9P218 RNY3P9-201ENST00000384727 106 ntBASIC5.49□□□□□ -1.53
COL20A1Q9P218 RNA5SP332-201ENST00000391063 115 ntBASIC5.49□□□□□ -1.53
COL20A1Q9P218 AC119751.6-201ENST00000416712 186 ntBASIC5.49□□□□□ -1.53
COL20A1Q9P218 AL589946.1-201ENST00000421465 420 ntTSL 3 BASIC5.49□□□□□ -1.53
COL20A1Q9P218 AL133419.1-201ENST00000423153 640 ntTSL 3 BASIC5.49□□□□□ -1.53
COL20A1Q9P218 C1DP1-201ENST00000426049 402 ntBASIC5.49□□□□□ -1.53
COL20A1Q9P218 AL031429.1-201ENST00000426775 749 ntTSL 2 BASIC5.49□□□□□ -1.53
COL20A1Q9P218 FTLP19-201ENST00000433300 394 ntBASIC5.49□□□□□ -1.53
COL20A1Q9P218 MTATP6P26-201ENST00000445926 662 ntBASIC5.49□□□□□ -1.53
COL20A1Q9P218 RNF148-202ENST00000447240 839 ntTSL 2 BASIC5.49□□□□□ -1.53
COL20A1Q9P218 AC003991.1-205ENST00000447758 625 ntTSL 5 BASIC5.49□□□□□ -1.53
COL20A1Q9P218 AL031668.1-201ENST00000451556 603 ntTSL 3 BASIC5.49□□□□□ -1.53
COL20A1Q9P218 NPM1P13-201ENST00000452663 865 ntBASIC5.49□□□□□ -1.53
COL20A1Q9P218 NDUFA12P1-201ENST00000455914 406 ntBASIC5.49□□□□□ -1.53
COL20A1Q9P218 CXorf51A-201ENST00000458472 431 ntAPPRIS P1 TSL 2 BASIC5.49□□□□□ -1.53
COL20A1Q9P218 RPL23AP12-201ENST00000467573 473 ntBASIC5.49□□□□□ -1.53
COL20A1Q9P218 AC104971.1-201ENST00000495117 578 ntBASIC5.49□□□□□ -1.53
COL20A1Q9P218 RN7SL558P-201ENST00000497468 299 ntBASIC5.49□□□□□ -1.53
COL20A1Q9P218 AC106821.1-201ENST00000502861 572 ntTSL 5 BASIC5.49□□□□□ -1.53
COL20A1Q9P218 MTCYBP35-201ENST00000503630 1137 ntBASIC5.49□□□□□ -1.53
COL20A1Q9P218 MYL12BP2-201ENST00000503948 512 ntBASIC5.49□□□□□ -1.53
COL20A1Q9P218 AC093292.1-201ENST00000505050 449 ntTSL 3 BASIC5.49□□□□□ -1.53
COL20A1Q9P218 LINC01088-205ENST00000509088 756 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
COL20A1Q9P218 AC092593.2-201ENST00000513866 913 ntBASIC5.49□□□□□ -1.53
COL20A1Q9P218 RNU2-30P-201ENST00000516209 141 ntBASIC5.49□□□□□ -1.53
COL20A1Q9P218 AC008662.2-201ENST00000522426 389 ntTSL 5 BASIC5.49□□□□□ -1.53
COL20A1Q9P218 CCDC179-202ENST00000532798 791 ntAPPRIS P1 TSL 2 BASIC5.49□□□□□ -1.53
COL20A1Q9P218 AC117505.1-202ENST00000547027 566 ntTSL 3 BASIC5.49□□□□□ -1.53
COL20A1Q9P218 LINC02444-201ENST00000550723 1256 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
COL20A1Q9P218 AC016526.2-201ENST00000554225 520 ntTSL 3 BASIC5.49□□□□□ -1.53
COL20A1Q9P218 AC090888.2-201ENST00000559765 1144 ntBASIC5.49□□□□□ -1.53
COL20A1Q9P218 AC105129.1-201ENST00000560250 297 ntBASIC5.49□□□□□ -1.53
COL20A1Q9P218 AC126323.3-201ENST00000565136 564 ntTSL 4 BASIC5.49□□□□□ -1.53
COL20A1Q9P218 AC090616.5-201ENST00000581225 299 ntTSL 5 BASIC5.49□□□□□ -1.53
COL20A1Q9P218 VN1R88P-201ENST00000596787 292 ntBASIC5.49□□□□□ -1.53
COL20A1Q9P218 AC073091.2-201ENST00000603205 907 ntBASIC5.49□□□□□ -1.53
COL20A1Q9P218 AL121932.1-201ENST00000605542 214 ntBASIC5.49□□□□□ -1.53
COL20A1Q9P218 AL583856.2-201ENST00000606298 543 ntBASIC5.49□□□□□ -1.53
COL20A1Q9P218 AC016877.3-201ENST00000606778 504 ntBASIC5.49□□□□□ -1.53
COL20A1Q9P218 AC055764.2-201ENST00000610089 670 ntBASIC5.49□□□□□ -1.53
COL20A1Q9P218 AC243585.1-201ENST00000617867 607 ntTSL 3 BASIC5.49□□□□□ -1.53
COL20A1Q9P218 VN1R7P-201ENST00000619242 903 ntBASIC5.49□□□□□ -1.53
COL20A1Q9P218 LDHA-225ENST00000625635 141 ntTSL 5 BASIC5.49□□□□□ -1.53
COL20A1Q9P218 AC019226.2-201ENST00000625973 424 ntBASIC5.49□□□□□ -1.53
COL20A1Q9P218 AC073869.7-201ENST00000640874 297 ntBASIC5.49□□□□□ -1.53
COL20A1Q9P218 ZNF663P-202ENST00000641770 1131 ntBASIC5.49□□□□□ -1.53
COL20A1Q9P218 LINC02211-204ENST00000642024 1070 ntBASIC5.49□□□□□ -1.53
COL20A1Q9P218 RAD17-220ENST00000616683 3057 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
COL20A1Q9P218 TAS2R20-201ENST00000538986 1381 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
COL20A1Q9P218 IL15-204ENST00000477265 6026 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
COL20A1Q9P218 STK31-201ENST00000354639 3596 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
COL20A1Q9P218 OSGEPL1-201ENST00000264151 1885 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
COL20A1Q9P218 KDM3B-209ENST00000542866 3634 ntTSL 2 BASIC5.49□□□□□ -1.53
COL20A1Q9P218 OR8J2-201ENST00000641465 2883 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
COL20A1Q9P218 PIGN-241ENST00000640050 3154 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
COL20A1Q9P218 NOX4-205ENST00000424319 4184 ntTSL 5 BASIC5.48□□□□□ -1.53
COL20A1Q9P218 GABPB1-204ENST00000396464 1401 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
COL20A1Q9P218 RABGAP1L-203ENST00000347255 1744 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
COL20A1Q9P218 AC106895.2-201ENST00000511291 1824 ntTSL 3 BASIC5.48□□□□□ -1.53
COL20A1Q9P218 AP001284.1-201ENST00000528393 2118 ntBASIC5.48□□□□□ -1.53
COL20A1Q9P218 TLK1P1-201ENST00000456760 2440 ntBASIC5.48□□□□□ -1.53
COL20A1Q9P218 SMG1P6-201ENST00000532337 2930 ntBASIC5.48□□□□□ -1.53
COL20A1Q9P218 C9orf72-203ENST00000380003 3200 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 98.2 ms