Protein–RNA interactions for Protein: Q9P1Y6

PHRF1, PHD and RING finger domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 1,649 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1Q9P1Y6 RN7SKP177-201ENST00000410567 355 ntBASIC5.37□□□□□ -1.55
PHRF1Q9P1Y6 AC092647.1-201ENST00000420654 287 ntBASIC5.37□□□□□ -1.55
PHRF1Q9P1Y6 PPIAP3-201ENST00000450588 505 ntBASIC5.37□□□□□ -1.55
PHRF1Q9P1Y6 AC107072.2-201ENST00000452412 555 ntTSL 3 BASIC5.37□□□□□ -1.55
PHRF1Q9P1Y6 AC108751.4-201ENST00000462931 1001 ntTSL 2 BASIC5.37□□□□□ -1.55
PHRF1Q9P1Y6 AC104619.4-201ENST00000510773 249 ntBASIC5.37□□□□□ -1.55
PHRF1Q9P1Y6 HMGN1P15-201ENST00000513870 295 ntBASIC5.37□□□□□ -1.55
PHRF1Q9P1Y6 RN7SKP46-201ENST00000515942 234 ntBASIC5.37□□□□□ -1.55
PHRF1Q9P1Y6 AC063950.1-201ENST00000552036 308 ntBASIC5.37□□□□□ -1.55
PHRF1Q9P1Y6 AL391497.1-201ENST00000608671 547 ntBASIC5.37□□□□□ -1.55
PHRF1Q9P1Y6 MIR3651-201ENST00000630427 90 ntBASIC5.37□□□□□ -1.55
PHRF1Q9P1Y6 CLCN5-202ENST00000376088 10108 ntTSL 2 BASIC5.37□□□□□ -1.55
PHRF1Q9P1Y6 ZNF429-209ENST00000618549 1889 ntTSL 5 BASIC5.37□□□□□ -1.55
PHRF1Q9P1Y6 KYNU-201ENST00000264170 15316 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
PHRF1Q9P1Y6 PTPRD-203ENST00000381196 9911 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
PHRF1Q9P1Y6 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC5.37□□□□□ -1.55
PHRF1Q9P1Y6 CLCA2-201ENST00000370565 4025 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
PHRF1Q9P1Y6 RFX3-212ENST00000617270 9253 ntAPPRIS P1 TSL 2 BASIC5.37□□□□□ -1.55
PHRF1Q9P1Y6 PROX1-205ENST00000498508 8498 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
PHRF1Q9P1Y6 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC5.37□□□□□ -1.55
PHRF1Q9P1Y6 RPS23P10-201ENST00000416185 486 ntBASIC5.37□□□□□ -1.55
PHRF1Q9P1Y6 AC115115.1-201ENST00000449927 248 ntBASIC5.37□□□□□ -1.55
PHRF1Q9P1Y6 LINC02383-201ENST00000508563 582 ntTSL 3 BASIC5.37□□□□□ -1.55
PHRF1Q9P1Y6 AC074250.1-201ENST00000511117 192 ntBASIC5.37□□□□□ -1.55
PHRF1Q9P1Y6 AC093853.1-201ENST00000515689 483 ntBASIC5.37□□□□□ -1.55
PHRF1Q9P1Y6 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC5.37□□□□□ -1.55
PHRF1Q9P1Y6 RPL21P7-201ENST00000557463 483 ntBASIC5.37□□□□□ -1.55
PHRF1Q9P1Y6 AC006237.1-201ENST00000603816 480 ntTSL 3 BASIC5.37□□□□□ -1.55
PHRF1Q9P1Y6 AC008035.1-201ENST00000607353 448 ntTSL 3 BASIC5.37□□□□□ -1.55
PHRF1Q9P1Y6 AC016957.2-201ENST00000616998 848 ntBASIC5.37□□□□□ -1.55
PHRF1Q9P1Y6 AL645927.2-201ENST00000618350 349 ntBASIC5.37□□□□□ -1.55
PHRF1Q9P1Y6 SMC2-202ENST00000374787 4266 ntAPPRIS P1 TSL 2 BASIC5.36□□□□□ -1.55
PHRF1Q9P1Y6 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
PHRF1Q9P1Y6 RIMS2-201ENST00000262231 3854 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
PHRF1Q9P1Y6 ASAH2-204ENST00000447815 2311 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
PHRF1Q9P1Y6 Z82217.1-201ENST00000625157 8149 ntBASIC5.36□□□□□ -1.55
PHRF1Q9P1Y6 UBA6-AS1-203ENST00000500538 3352 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
PHRF1Q9P1Y6 TNFAIP8-203ENST00000415806 1990 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
PHRF1Q9P1Y6 Z97055.1-201ENST00000419730 712 ntBASIC5.36□□□□□ -1.55
PHRF1Q9P1Y6 LINC00382-201ENST00000427918 890 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
PHRF1Q9P1Y6 TMX2P1-201ENST00000436507 708 ntBASIC5.36□□□□□ -1.55
PHRF1Q9P1Y6 AL353633.1-201ENST00000458480 382 ntTSL 3 BASIC5.36□□□□□ -1.55
PHRF1Q9P1Y6 AC006517.1-201ENST00000480485 328 ntBASIC5.36□□□□□ -1.55
PHRF1Q9P1Y6 AC026782.2-201ENST00000510845 636 ntBASIC5.36□□□□□ -1.55
PHRF1Q9P1Y6 SNORA70.24-201ENST00000517233 118 ntBASIC5.36□□□□□ -1.55
PHRF1Q9P1Y6 CYCSP30-201ENST00000546447 172 ntBASIC5.36□□□□□ -1.55
PHRF1Q9P1Y6 LINC02394-201ENST00000549140 543 ntTSL 4 BASIC5.36□□□□□ -1.55
PHRF1Q9P1Y6 SNHG14-221ENST00000554726 1116 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
PHRF1Q9P1Y6 AC091167.4-201ENST00000605079 184 ntBASIC5.36□□□□□ -1.55
PHRF1Q9P1Y6 AL031666.3-201ENST00000609320 1006 ntBASIC5.36□□□□□ -1.55
PHRF1Q9P1Y6 NUTM2B-AS1-213ENST00000619625 7611 ntTSL 2 BASIC5.36□□□□□ -1.55
PHRF1Q9P1Y6 LRRC49-204ENST00000544974 6605 ntTSL 2 BASIC5.36□□□□□ -1.55
PHRF1Q9P1Y6 RABGAP1L-202ENST00000325589 1880 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
PHRF1Q9P1Y6 STAMBPL1-202ENST00000371924 2208 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
PHRF1Q9P1Y6 C6-201ENST00000263413 3661 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
PHRF1Q9P1Y6 TINAG-201ENST00000259782 1754 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
PHRF1Q9P1Y6 CDC42BPA-201ENST00000334218 10134 ntTSL 5 BASIC5.35□□□□□ -1.55
PHRF1Q9P1Y6 SLC44A5-202ENST00000370859 3896 ntAPPRIS ALT2 TSL 2 BASIC5.35□□□□□ -1.55
PHRF1Q9P1Y6 AL445623.2-201ENST00000640307 4805 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
PHRF1Q9P1Y6 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
PHRF1Q9P1Y6 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC5.35□□□□□ -1.55
PHRF1Q9P1Y6 CYCSP53-201ENST00000455540 265 ntBASIC5.35□□□□□ -1.55
PHRF1Q9P1Y6 ZIC4-AS1-201ENST00000462168 268 ntTSL 5 BASIC5.35□□□□□ -1.55
PHRF1Q9P1Y6 NPM1P47-201ENST00000560843 856 ntBASIC5.35□□□□□ -1.55
PHRF1Q9P1Y6 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC5.35□□□□□ -1.55
PHRF1Q9P1Y6 EIF4A2P1-201ENST00000587313 1063 ntBASIC5.35□□□□□ -1.55
PHRF1Q9P1Y6 AC097467.3-204ENST00000595229 827 ntTSL 5 BASIC5.35□□□□□ -1.55
PHRF1Q9P1Y6 AC244505.7-201ENST00000599675 272 ntBASIC5.35□□□□□ -1.55
PHRF1Q9P1Y6 SNX6P1-201ENST00000601728 1224 ntBASIC5.35□□□□□ -1.55
PHRF1Q9P1Y6 AL022097.1-201ENST00000602500 806 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
PHRF1Q9P1Y6 AC104662.1-201ENST00000604448 511 ntBASIC5.35□□□□□ -1.55
PHRF1Q9P1Y6 AC138907.10-201ENST00000623708 983 ntBASIC5.35□□□□□ -1.55
PHRF1Q9P1Y6 EIF1AY-201ENST00000361365 1390 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
PHRF1Q9P1Y6 SGO1-202ENST00000306698 1531 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
PHRF1Q9P1Y6 UGT2B7-201ENST00000305231 1887 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
PHRF1Q9P1Y6 AC074029.4-201ENST00000624796 1859 ntBASIC5.35□□□□□ -1.55
PHRF1Q9P1Y6 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC5.35□□□□□ -1.55
PHRF1Q9P1Y6 MAPK10-320ENST00000641462 6696 ntBASIC5.34□□□□□ -1.55
PHRF1Q9P1Y6 AC067945.1-201ENST00000342609 618 ntBASIC5.34□□□□□ -1.55
PHRF1Q9P1Y6 TRAV9-2-201ENST00000390441 394 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
PHRF1Q9P1Y6 UBE2Q2P12-201ENST00000414573 204 ntBASIC5.34□□□□□ -1.55
PHRF1Q9P1Y6 HSFY1P1-201ENST00000423928 1178 ntBASIC5.34□□□□□ -1.55
PHRF1Q9P1Y6 AL360013.2-201ENST00000440104 807 ntTSL 2 BASIC5.34□□□□□ -1.55
PHRF1Q9P1Y6 PRDX3P3-201ENST00000447765 522 ntBASIC5.34□□□□□ -1.55
PHRF1Q9P1Y6 FABP3P2-201ENST00000453169 399 ntBASIC5.34□□□□□ -1.55
PHRF1Q9P1Y6 AP001439.1-201ENST00000455275 392 ntTSL 2 BASIC5.34□□□□□ -1.55
PHRF1Q9P1Y6 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC5.34□□□□□ -1.55
PHRF1Q9P1Y6 RPL7P24-201ENST00000493052 752 ntBASIC5.34□□□□□ -1.55
PHRF1Q9P1Y6 AC107027.1-201ENST00000503006 575 ntTSL 2 BASIC5.34□□□□□ -1.55
PHRF1Q9P1Y6 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC5.34□□□□□ -1.55
PHRF1Q9P1Y6 AC027807.1-201ENST00000559921 996 ntBASIC5.34□□□□□ -1.55
PHRF1Q9P1Y6 AC037471.2-201ENST00000564941 598 ntBASIC5.34□□□□□ -1.55
PHRF1Q9P1Y6 PUS10-201ENST00000316752 2278 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
PHRF1Q9P1Y6 OTC-201ENST00000039007 1585 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
PHRF1Q9P1Y6 CFL2-201ENST00000298159 6747 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
PHRF1Q9P1Y6 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC5.34□□□□□ -1.55
PHRF1Q9P1Y6 PCDH18-202ENST00000412923 5102 ntAPPRIS ALT1 TSL 1 (best) BASIC5.34□□□□□ -1.55
PHRF1Q9P1Y6 DOCK10-202ENST00000409592 7288 ntAPPRIS ALT2 TSL 1 (best) BASIC5.34□□□□□ -1.55
PHRF1Q9P1Y6 TRPM3-209ENST00000377110 12258 ntAPPRIS ALT1 TSL 1 (best) BASIC5.34□□□□□ -1.56
PHRF1Q9P1Y6 ZNF573-217ENST00000590414 2225 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 114.9 ms