Protein–RNA interactions for Protein: Q9HAU5

UPF2, Regulator of nonsense transcripts 2, humanhuman

Known RBP Predictions only

Length 1,272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2Q9HAU5 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
UPF2Q9HAU5 ADAM18-201ENST00000265707 2388 ntAPPRIS P3 TSL 1 (best) BASIC5.18□□□□□ -1.58
UPF2Q9HAU5 STK31-205ENST00000433467 3085 ntTSL 2 BASIC5.17□□□□□ -1.58
UPF2Q9HAU5 Z82217.1-201ENST00000625157 8149 ntBASIC5.17□□□□□ -1.58
UPF2Q9HAU5 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
UPF2Q9HAU5 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
UPF2Q9HAU5 AP000568.1-201ENST00000282964 442 ntBASIC5.17□□□□□ -1.58
UPF2Q9HAU5 PLET1-201ENST00000338832 1215 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
UPF2Q9HAU5 FAS-205ENST00000357339 1044 ntAPPRIS ALT2 TSL 1 (best) BASIC5.17□□□□□ -1.58
UPF2Q9HAU5 AL589655.1-201ENST00000405398 482 ntBASIC5.17□□□□□ -1.58
UPF2Q9HAU5 RPL23AP48-201ENST00000406913 488 ntBASIC5.17□□□□□ -1.58
UPF2Q9HAU5 RN7SKP106-201ENST00000410832 272 ntBASIC5.17□□□□□ -1.58
UPF2Q9HAU5 GYPE-202ENST00000437468 499 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
UPF2Q9HAU5 AC105398.1-201ENST00000446073 402 ntTSL 5 BASIC5.17□□□□□ -1.58
UPF2Q9HAU5 PRKACB-213ENST00000446538 1112 ntTSL 2 BASIC5.17□□□□□ -1.58
UPF2Q9HAU5 RPL31P44-201ENST00000447680 377 ntBASIC5.17□□□□□ -1.58
UPF2Q9HAU5 AC138965.1-202ENST00000502354 547 ntTSL 5 BASIC5.17□□□□□ -1.58
UPF2Q9HAU5 AC010374.1-201ENST00000503762 1237 ntBASIC5.17□□□□□ -1.58
UPF2Q9HAU5 AC140125.3-201ENST00000505248 547 ntTSL 4 BASIC5.17□□□□□ -1.58
UPF2Q9HAU5 MTND3P24-201ENST00000506306 329 ntBASIC5.17□□□□□ -1.58
UPF2Q9HAU5 OR5M14P-201ENST00000506803 618 ntBASIC5.17□□□□□ -1.58
UPF2Q9HAU5 AC025768.1-201ENST00000510057 267 ntBASIC5.17□□□□□ -1.58
UPF2Q9HAU5 AC090281.1-201ENST00000523019 276 ntBASIC5.17□□□□□ -1.58
UPF2Q9HAU5 PCNPP1-201ENST00000552501 511 ntBASIC5.17□□□□□ -1.58
UPF2Q9HAU5 AC018552.1-201ENST00000562099 811 ntBASIC5.17□□□□□ -1.58
UPF2Q9HAU5 SNORD39.2-201ENST00000579995 76 ntBASIC5.17□□□□□ -1.58
UPF2Q9HAU5 AC069061.3-201ENST00000582254 823 ntBASIC5.17□□□□□ -1.58
UPF2Q9HAU5 OR4H6P-202ENST00000603819 340 ntBASIC5.17□□□□□ -1.58
UPF2Q9HAU5 AP006248.3-201ENST00000623580 594 ntBASIC5.17□□□□□ -1.58
UPF2Q9HAU5 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC5.17□□□□□ -1.58
UPF2Q9HAU5 LGI1-228ENST00000637689 1802 ntTSL 5 BASIC5.17□□□□□ -1.58
UPF2Q9HAU5 GMNC-201ENST00000442080 3422 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
UPF2Q9HAU5 SLCO1C1-208ENST00000545102 2868 ntTSL 2 BASIC5.17□□□□□ -1.58
UPF2Q9HAU5 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
UPF2Q9HAU5 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC5.16□□□□□ -1.58
UPF2Q9HAU5 IQCB2P-201ENST00000401788 1633 ntBASIC5.16□□□□□ -1.58
UPF2Q9HAU5 ELOC-201ENST00000284811 683 ntAPPRIS P1 TSL 3 BASIC5.16□□□□□ -1.58
UPF2Q9HAU5 GKN2-201ENST00000328895 800 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
UPF2Q9HAU5 RNU6-729P-201ENST00000384399 107 ntBASIC5.16□□□□□ -1.58
UPF2Q9HAU5 BMS1P17-201ENST00000413661 723 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
UPF2Q9HAU5 LINC01341-201ENST00000419361 552 ntTSL 2 BASIC5.16□□□□□ -1.58
UPF2Q9HAU5 GAPDHP49-201ENST00000421421 961 ntBASIC5.16□□□□□ -1.58
UPF2Q9HAU5 AC073464.3-201ENST00000422564 712 ntBASIC5.16□□□□□ -1.58
UPF2Q9HAU5 DPH5-204ENST00000427040 609 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
UPF2Q9HAU5 SCP2-206ENST00000430330 938 ntTSL 2 BASIC5.16□□□□□ -1.58
UPF2Q9HAU5 AL158209.1-201ENST00000433460 439 ntTSL 3 BASIC5.16□□□□□ -1.58
UPF2Q9HAU5 AL392003.1-201ENST00000434394 243 ntBASIC5.16□□□□□ -1.58
UPF2Q9HAU5 TMEM212-IT1-201ENST00000456146 470 ntTSL 3 BASIC5.16□□□□□ -1.58
UPF2Q9HAU5 AC004453.1-201ENST00000487895 408 ntBASIC5.16□□□□□ -1.58
UPF2Q9HAU5 CAB39P1-201ENST00000502277 460 ntBASIC5.16□□□□□ -1.58
UPF2Q9HAU5 LINC01060-205ENST00000512839 716 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
UPF2Q9HAU5 IGKV1-32-201ENST00000519290 311 ntBASIC5.16□□□□□ -1.58
UPF2Q9HAU5 SDCBP-207ENST00000520168 1097 ntTSL 2 BASIC5.16□□□□□ -1.58
UPF2Q9HAU5 MTND5P21-201ENST00000531961 522 ntBASIC5.16□□□□□ -1.58
UPF2Q9HAU5 MIR670HG-201ENST00000533531 897 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
UPF2Q9HAU5 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC5.16□□□□□ -1.58
UPF2Q9HAU5 MIR4646-201ENST00000580775 63 ntBASIC5.16□□□□□ -1.58
UPF2Q9HAU5 AC005776.1-201ENST00000603164 290 ntBASIC5.16□□□□□ -1.58
UPF2Q9HAU5 AL121873.1-201ENST00000616013 524 ntBASIC5.16□□□□□ -1.58
UPF2Q9HAU5 AL049536.1-201ENST00000625043 744 ntBASIC5.16□□□□□ -1.58
UPF2Q9HAU5 LYRM2-211ENST00000626778 696 ntTSL 5 BASIC5.16□□□□□ -1.58
UPF2Q9HAU5 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
UPF2Q9HAU5 ASAH1-224ENST00000636269 685 ntTSL 3 BASIC5.16□□□□□ -1.58
UPF2Q9HAU5 MYCT1-201ENST00000367245 3030 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
UPF2Q9HAU5 MTX3-203ENST00000512560 4799 ntTSL 2 BASIC5.16□□□□□ -1.58
UPF2Q9HAU5 AC007491.1-202ENST00000637961 1576 ntTSL 5 BASIC5.16□□□□□ -1.58
UPF2Q9HAU5 FAM35A-201ENST00000298784 3402 ntAPPRIS P1 TSL 2 BASIC5.16□□□□□ -1.58
UPF2Q9HAU5 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
UPF2Q9HAU5 IPCEF1-210ENST00000519344 1621 ntAPPRIS ALT2 TSL 5 BASIC5.15□□□□□ -1.58
UPF2Q9HAU5 MRE11-202ENST00000323977 2588 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
UPF2Q9HAU5 SPAM1-203ENST00000402183 1860 ntAPPRIS P4 TSL 5 BASIC5.15□□□□□ -1.58
UPF2Q9HAU5 EMSY-215ENST00000533248 3798 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
UPF2Q9HAU5 AC098798.1-201ENST00000503998 1447 ntTSL 5 BASIC5.15□□□□□ -1.58
UPF2Q9HAU5 IQCG-201ENST00000265239 2262 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
UPF2Q9HAU5 NME5-201ENST00000265191 1198 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
UPF2Q9HAU5 RNA5SP513-201ENST00000364648 118 ntBASIC5.15□□□□□ -1.59
UPF2Q9HAU5 AL645927.1-201ENST00000396783 406 ntBASIC5.15□□□□□ -1.59
UPF2Q9HAU5 CCNB2P1-201ENST00000399411 1150 ntBASIC5.15□□□□□ -1.59
UPF2Q9HAU5 LINC01945-201ENST00000419784 840 ntTSL 2 BASIC5.15□□□□□ -1.59
UPF2Q9HAU5 MYCBP2-AS1-201ENST00000422231 519 ntTSL 3 BASIC5.15□□□□□ -1.59
UPF2Q9HAU5 MTND2P25-201ENST00000449028 610 ntBASIC5.15□□□□□ -1.59
UPF2Q9HAU5 NREP-207ENST00000450761 636 ntAPPRIS P1 TSL 4 BASIC5.15□□□□□ -1.59
UPF2Q9HAU5 DHFRP3-201ENST00000455595 559 ntBASIC5.15□□□□□ -1.59
UPF2Q9HAU5 ARHGEF3-AS1-201ENST00000477246 489 ntTSL 2 BASIC5.15□□□□□ -1.59
UPF2Q9HAU5 AC105914.2-201ENST00000507525 233 ntTSL 3 BASIC5.15□□□□□ -1.59
UPF2Q9HAU5 ZCCHC10-209ENST00000513541 794 ntAPPRIS ALT2 TSL 2 BASIC5.15□□□□□ -1.59
UPF2Q9HAU5 LINC01218-201ENST00000515150 481 ntTSL 3 BASIC5.15□□□□□ -1.59
UPF2Q9HAU5 IGKV2-38-201ENST00000517443 247 ntBASIC5.15□□□□□ -1.59
UPF2Q9HAU5 AC025524.2-211ENST00000519990 1173 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
UPF2Q9HAU5 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC5.15□□□□□ -1.59
UPF2Q9HAU5 AC130404.1-201ENST00000539362 739 ntTSL 2 BASIC5.15□□□□□ -1.59
UPF2Q9HAU5 AC026888.1-201ENST00000553348 559 ntTSL 4 BASIC5.15□□□□□ -1.59
UPF2Q9HAU5 AC021483.2-201ENST00000567415 758 ntBASIC5.15□□□□□ -1.59
UPF2Q9HAU5 AC068790.5-201ENST00000602741 355 ntBASIC5.15□□□□□ -1.59
UPF2Q9HAU5 AL590410.1-201ENST00000617925 333 ntBASIC5.15□□□□□ -1.59
UPF2Q9HAU5 HMGN2-210ENST00000619352 1148 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
UPF2Q9HAU5 AC018445.2-201ENST00000622987 260 ntBASIC5.15□□□□□ -1.59
UPF2Q9HAU5 AC119674.1-220ENST00000641502 1048 ntBASIC5.15□□□□□ -1.59
UPF2Q9HAU5 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC5.15□□□□□ -1.59
UPF2Q9HAU5 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 73.6 ms