Protein–RNA interactions for Protein: Q9BY43

CHMP4A, Charged multivesicular body protein 4a, humanhuman

Predictions only

Length 222 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4AQ9BY43 PAN3-202ENST00000399613 4940 ntAPPRIS ALT2 TSL 5 BASIC6.25□□□□□ -1.41
CHMP4AQ9BY43 XIAPP3-201ENST00000312918 795 ntBASIC6.25□□□□□ -1.41
CHMP4AQ9BY43 HMGB3P18-201ENST00000406327 590 ntBASIC6.25□□□□□ -1.41
CHMP4AQ9BY43 AL672277.1-201ENST00000420865 588 ntTSL 2 BASIC6.25□□□□□ -1.41
CHMP4AQ9BY43 AC021035.1-201ENST00000421597 427 ntTSL 3 BASIC6.25□□□□□ -1.41
CHMP4AQ9BY43 OR2AH1P-201ENST00000425717 928 ntBASIC6.25□□□□□ -1.41
CHMP4AQ9BY43 CDY14P-201ENST00000431260 1014 ntBASIC6.25□□□□□ -1.41
CHMP4AQ9BY43 AL049745.1-201ENST00000433953 286 ntBASIC6.25□□□□□ -1.41
CHMP4AQ9BY43 AC008072.1-201ENST00000434254 824 ntBASIC6.25□□□□□ -1.41
CHMP4AQ9BY43 CDY12P-201ENST00000440679 1015 ntBASIC6.25□□□□□ -1.41
CHMP4AQ9BY43 CDY13P-201ENST00000445813 1015 ntBASIC6.25□□□□□ -1.41
CHMP4AQ9BY43 RPL29P29-201ENST00000448725 423 ntBASIC6.25□□□□□ -1.41
CHMP4AQ9BY43 CDY23P-201ENST00000451661 1014 ntBASIC6.25□□□□□ -1.41
CHMP4AQ9BY43 CREM-226ENST00000469949 721 ntTSL 3 BASIC6.25□□□□□ -1.41
CHMP4AQ9BY43 LINC01206-203ENST00000476815 482 ntTSL 3 BASIC6.25□□□□□ -1.41
CHMP4AQ9BY43 MTND3P24-201ENST00000506306 329 ntBASIC6.25□□□□□ -1.41
CHMP4AQ9BY43 IGBP1P5-201ENST00000507524 1000 ntBASIC6.25□□□□□ -1.41
CHMP4AQ9BY43 AC133963.2-201ENST00000513686 578 ntBASIC6.25□□□□□ -1.41
CHMP4AQ9BY43 RAD21-204ENST00000518055 896 ntTSL 2 BASIC6.25□□□□□ -1.41
CHMP4AQ9BY43 LONRF1-203ENST00000525024 841 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
CHMP4AQ9BY43 C18orf32-202ENST00000582392 714 ntAPPRIS P1 TSL 3 BASIC6.25□□□□□ -1.41
CHMP4AQ9BY43 AL442125.2-201ENST00000619338 418 ntTSL 5 BASIC6.25□□□□□ -1.41
CHMP4AQ9BY43 MTCO1P14-201ENST00000441695 1559 ntBASIC6.25□□□□□ -1.41
CHMP4AQ9BY43 SAMMSON-226ENST00000642089 1582 ntBASIC6.25□□□□□ -1.41
CHMP4AQ9BY43 NAP1L1-204ENST00000535020 1686 ntTSL 2 BASIC6.25□□□□□ -1.41
CHMP4AQ9BY43 CSPP1-201ENST00000262210 4367 ntAPPRIS P3 TSL 1 (best) BASIC6.25□□□□□ -1.41
CHMP4AQ9BY43 ABCA12-201ENST00000272895 9100 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
CHMP4AQ9BY43 ERC2-201ENST00000288221 6138 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
CHMP4AQ9BY43 CNTN5-201ENST00000279463 5925 ntTSL 5 BASIC6.25□□□□□ -1.41
CHMP4AQ9BY43 RABGAP1L-206ENST00000367688 1425 ntTSL 2 BASIC6.25□□□□□ -1.41
CHMP4AQ9BY43 DICER1-212ENST00000541352 5621 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
CHMP4AQ9BY43 MAP2-202ENST00000360351 9711 ntAPPRIS P2 TSL 5 BASIC6.24□□□□□ -1.41
CHMP4AQ9BY43 RASA1-205ENST00000512763 3060 ntAPPRIS ALT2 TSL 2 BASIC6.24□□□□□ -1.41
CHMP4AQ9BY43 SPINK5-201ENST00000256084 3535 ntAPPRIS P3 TSL 1 (best) BASIC6.24□□□□□ -1.41
CHMP4AQ9BY43 AC090337.1-201ENST00000579651 2074 ntBASIC6.24□□□□□ -1.41
CHMP4AQ9BY43 MTCO1P6-201ENST00000481192 1384 ntBASIC6.24□□□□□ -1.41
CHMP4AQ9BY43 AC013442.1-201ENST00000397347 228 ntBASIC6.24□□□□□ -1.41
CHMP4AQ9BY43 MIR298-201ENST00000401212 88 ntBASIC6.24□□□□□ -1.41
CHMP4AQ9BY43 LINC00427-201ENST00000412722 430 ntTSL 2 BASIC6.24□□□□□ -1.41
CHMP4AQ9BY43 TBCAP2-201ENST00000416175 326 ntBASIC6.24□□□□□ -1.41
CHMP4AQ9BY43 LINC00993-201ENST00000420453 540 ntBASIC6.24□□□□□ -1.41
CHMP4AQ9BY43 AC104333.2-201ENST00000422630 192 ntBASIC6.24□□□□□ -1.41
CHMP4AQ9BY43 SLC16A12-AS1-201ENST00000423474 405 ntTSL 3 BASIC6.24□□□□□ -1.41
CHMP4AQ9BY43 AL158154.1-201ENST00000427387 465 ntTSL 3 BASIC6.24□□□□□ -1.41
CHMP4AQ9BY43 TEX41-205ENST00000431734 529 ntTSL 4 BASIC6.24□□□□□ -1.41
CHMP4AQ9BY43 AL929236.1-201ENST00000443622 518 ntTSL 3 BASIC6.24□□□□□ -1.41
CHMP4AQ9BY43 AL360091.1-201ENST00000447949 496 ntTSL 5 BASIC6.24□□□□□ -1.41
CHMP4AQ9BY43 AC000111.2-201ENST00000448200 210 ntBASIC6.24□□□□□ -1.41
CHMP4AQ9BY43 CD200R1-205ENST00000490004 778 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
CHMP4AQ9BY43 RN7SL558P-201ENST00000497468 299 ntBASIC6.24□□□□□ -1.41
CHMP4AQ9BY43 PPM1AP1-201ENST00000502740 1135 ntBASIC6.24□□□□□ -1.41
CHMP4AQ9BY43 AC107463.1-203ENST00000509713 284 ntTSL 5 BASIC6.24□□□□□ -1.41
CHMP4AQ9BY43 COL6A4P2-205ENST00000509855 506 ntBASIC6.24□□□□□ -1.41
CHMP4AQ9BY43 AC068880.2-201ENST00000521016 362 ntTSL 5 BASIC6.24□□□□□ -1.41
CHMP4AQ9BY43 AC009446.1-202ENST00000521131 473 ntTSL 3 BASIC6.24□□□□□ -1.41
CHMP4AQ9BY43 STX3-204ENST00000530221 534 ntTSL 5 BASIC6.24□□□□□ -1.41
CHMP4AQ9BY43 AC107032.2-201ENST00000551082 386 ntTSL 3 BASIC6.24□□□□□ -1.41
CHMP4AQ9BY43 LINC02325-202ENST00000554260 567 ntTSL 4 BASIC6.24□□□□□ -1.41
CHMP4AQ9BY43 PCLAF-203ENST00000558008 766 ntTSL 3 BASIC6.24□□□□□ -1.41
CHMP4AQ9BY43 LINC01584-202ENST00000563990 852 ntTSL 3 BASIC6.24□□□□□ -1.41
CHMP4AQ9BY43 C7orf77-201ENST00000616258 548 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
CHMP4AQ9BY43 AC091953.3-201ENST00000623220 236 ntBASIC6.24□□□□□ -1.41
CHMP4AQ9BY43 AC048338.2-201ENST00000623601 684 ntTSL 5 BASIC6.24□□□□□ -1.41
CHMP4AQ9BY43 PLEKHG7-201ENST00000344636 3868 ntTSL 5 BASIC6.24□□□□□ -1.41
CHMP4AQ9BY43 GRIK2-201ENST00000318991 4317 ntTSL 5 BASIC6.24□□□□□ -1.41
CHMP4AQ9BY43 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
CHMP4AQ9BY43 OR52E4-202ENST00000641726 2947 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
CHMP4AQ9BY43 A2MP1-204ENST00000566278 4130 ntBASIC6.24□□□□□ -1.41
CHMP4AQ9BY43 ARHGAP42-203ENST00000524892 5685 ntTSL 5 BASIC6.24□□□□□ -1.41
CHMP4AQ9BY43 SENP7-202ENST00000348610 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC6.24□□□□□ -1.41
CHMP4AQ9BY43 INPP4B-201ENST00000262992 3741 ntAPPRIS P1 TSL 5 BASIC6.24□□□□□ -1.41
CHMP4AQ9BY43 PATJ-213ENST00000613764 4172 ntTSL 5 BASIC6.24□□□□□ -1.41
CHMP4AQ9BY43 FANCD2-202ENST00000383807 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC6.23□□□□□ -1.41
CHMP4AQ9BY43 RAP1GDS1-206ENST00000453712 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC6.23□□□□□ -1.41
CHMP4AQ9BY43 AC024341.1-201ENST00000526444 1552 ntBASIC6.23□□□□□ -1.41
CHMP4AQ9BY43 NMD3P1-201ENST00000439704 1488 ntBASIC6.23□□□□□ -1.41
CHMP4AQ9BY43 FCHO2-207ENST00000512348 2700 ntTSL 2 BASIC6.23□□□□□ -1.41
CHMP4AQ9BY43 RNU6-543P-201ENST00000362576 108 ntBASIC6.23□□□□□ -1.41
CHMP4AQ9BY43 MIR153-1-201ENST00000384914 90 ntBASIC6.23□□□□□ -1.41
CHMP4AQ9BY43 TRBV24-1-201ENST00000390397 381 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
CHMP4AQ9BY43 RRM2B-203ENST00000395912 900 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
CHMP4AQ9BY43 PRRC2CP1-201ENST00000404428 159 ntBASIC6.23□□□□□ -1.41
CHMP4AQ9BY43 VN1R42P-201ENST00000424651 344 ntBASIC6.23□□□□□ -1.41
CHMP4AQ9BY43 AL360081.1-201ENST00000428299 555 ntBASIC6.23□□□□□ -1.41
CHMP4AQ9BY43 AP001324.1-201ENST00000428553 399 ntBASIC6.23□□□□□ -1.41
CHMP4AQ9BY43 AC073052.1-201ENST00000440417 714 ntBASIC6.23□□□□□ -1.41
CHMP4AQ9BY43 AC009263.1-201ENST00000441193 1239 ntBASIC6.23□□□□□ -1.41
CHMP4AQ9BY43 TPT1P1-201ENST00000458495 518 ntBASIC6.23□□□□□ -1.41
CHMP4AQ9BY43 RPL35AP28-201ENST00000459730 331 ntBASIC6.23□□□□□ -1.41
CHMP4AQ9BY43 AC089999.1-201ENST00000460336 374 ntBASIC6.23□□□□□ -1.41
CHMP4AQ9BY43 AC063943.1-201ENST00000465434 453 ntBASIC6.23□□□□□ -1.41
CHMP4AQ9BY43 AC006967.1-201ENST00000467608 589 ntBASIC6.23□□□□□ -1.41
CHMP4AQ9BY43 RPS29P22-201ENST00000472363 168 ntBASIC6.23□□□□□ -1.41
CHMP4AQ9BY43 UBE2D3-217ENST00000504211 578 ntTSL 2 BASIC6.23□□□□□ -1.41
CHMP4AQ9BY43 AC087272.1-201ENST00000523624 533 ntBASIC6.23□□□□□ -1.41
CHMP4AQ9BY43 RGS4-207ENST00000527809 817 ntTSL 4 BASIC6.23□□□□□ -1.41
CHMP4AQ9BY43 AL049830.4-201ENST00000555149 351 ntBASIC6.23□□□□□ -1.41
CHMP4AQ9BY43 AL132712.2-201ENST00000556653 127 ntTSL 3 BASIC6.23□□□□□ -1.41
CHMP4AQ9BY43 VN1R88P-201ENST00000596787 292 ntBASIC6.23□□□□□ -1.41
CHMP4AQ9BY43 NAA60-237ENST00000615865 326 ntTSL 5 BASIC6.23□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 107.3 ms