Protein–RNA interactions for Protein: Q8IX30

SCUBE3, Signal peptide, CUB and EGF-like domain-containing protein 3, humanhuman

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE3Q8IX30 BDNF-207ENST00000395986 3979 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
SCUBE3Q8IX30 DAZ3-202ENST00000382365 3503 ntAPPRIS P5 TSL 1 (best) BASIC7.31□□□□□ -1.24
SCUBE3Q8IX30 SMARCA2-201ENST00000302401 2242 ntTSL 2 BASIC7.31□□□□□ -1.24
SCUBE3Q8IX30 ZNF549-204ENST00000602149 5505 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
SCUBE3Q8IX30 MORC3-201ENST00000400485 4246 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
SCUBE3Q8IX30 PNPT1P2-201ENST00000456768 2050 ntBASIC7.31□□□□□ -1.24
SCUBE3Q8IX30 AL360014.1-201ENST00000562922 2084 ntTSL 3 BASIC7.31□□□□□ -1.24
SCUBE3Q8IX30 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC7.31□□□□□ -1.24
SCUBE3Q8IX30 OSGEPL1-207ENST00000522700 1779 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
SCUBE3Q8IX30 KCNN3-205ENST00000618040 13057 ntTSL 5 BASIC7.3□□□□□ -1.24
SCUBE3Q8IX30 DNAJC5G-203ENST00000404433 1647 ntAPPRIS P1 TSL 5 BASIC7.3□□□□□ -1.24
SCUBE3Q8IX30 ZYG11B-201ENST00000294353 8093 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
SCUBE3Q8IX30 NBPF3-202ENST00000318249 3591 ntAPPRIS P3 TSL 1 (best) BASIC7.3□□□□□ -1.24
SCUBE3Q8IX30 DLC1-215ENST00000520226 3556 ntTSL 2 BASIC7.3□□□□□ -1.24
SCUBE3Q8IX30 BRWD1-203ENST00000342449 12929 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
SCUBE3Q8IX30 SEC61A2-202ENST00000304267 2030 ntTSL 2 BASIC7.3□□□□□ -1.24
SCUBE3Q8IX30 OLFM3-202ENST00000370103 3255 ntAPPRIS P3 TSL 1 (best) BASIC7.3□□□□□ -1.24
SCUBE3Q8IX30 PRNCR1-201ENST00000635449 12727 ntBASIC7.3□□□□□ -1.24
SCUBE3Q8IX30 CLCA3P-201ENST00000284054 2407 ntTSL 5 BASIC7.3□□□□□ -1.24
SCUBE3Q8IX30 NCAPH-205ENST00000455200 2952 ntAPPRIS ALT2 TSL 5 BASIC7.3□□□□□ -1.24
SCUBE3Q8IX30 ZNF81-204ENST00000376954 7933 ntAPPRIS P1 TSL 5 BASIC7.3□□□□□ -1.24
SCUBE3Q8IX30 PAK3-213ENST00000620137 2130 ntTSL 5 BASIC7.3□□□□□ -1.24
SCUBE3Q8IX30 SYT4-201ENST00000255224 4110 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
SCUBE3Q8IX30 EOGT-201ENST00000295571 4138 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
SCUBE3Q8IX30 GABRA1-218ENST00000637827 1838 ntAPPRIS P1 TSL 5 BASIC7.3□□□□□ -1.24
SCUBE3Q8IX30 MUCL1-201ENST00000308796 470 ntAPPRIS P2 TSL 1 (best) BASIC7.3□□□□□ -1.24
SCUBE3Q8IX30 RPL12P13-201ENST00000310055 497 ntBASIC7.3□□□□□ -1.24
SCUBE3Q8IX30 Y_RNA.447-201ENST00000384184 113 ntBASIC7.3□□□□□ -1.24
SCUBE3Q8IX30 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC7.3□□□□□ -1.24
SCUBE3Q8IX30 LINC00427-201ENST00000412722 430 ntTSL 2 BASIC7.3□□□□□ -1.24
SCUBE3Q8IX30 OR1M1-201ENST00000429566 1035 ntAPPRIS P1 BASIC7.3□□□□□ -1.24
SCUBE3Q8IX30 RPL21P23-201ENST00000446654 460 ntBASIC7.3□□□□□ -1.24
SCUBE3Q8IX30 AL035409.1-201ENST00000454305 497 ntTSL 2 BASIC7.3□□□□□ -1.24
SCUBE3Q8IX30 RPL31P50-201ENST00000471002 296 ntBASIC7.3□□□□□ -1.24
SCUBE3Q8IX30 AC092546.1-202ENST00000505628 499 ntTSL 2 BASIC7.3□□□□□ -1.24
SCUBE3Q8IX30 RNY3P15-201ENST00000516297 97 ntBASIC7.3□□□□□ -1.24
SCUBE3Q8IX30 AC083923.2-201ENST00000519880 574 ntTSL 4 BASIC7.3□□□□□ -1.24
SCUBE3Q8IX30 LINC01033-204ENST00000523194 715 ntTSL 2 BASIC7.3□□□□□ -1.24
SCUBE3Q8IX30 KCTD21-AS1-206ENST00000532831 856 ntTSL 2 BASIC7.3□□□□□ -1.24
SCUBE3Q8IX30 AC007537.1-201ENST00000539347 327 ntBASIC7.3□□□□□ -1.24
SCUBE3Q8IX30 RPLP0-225ENST00000552292 720 ntTSL 2 BASIC7.3□□□□□ -1.24
SCUBE3Q8IX30 PSMA6-214ENST00000556506 763 ntTSL 5 BASIC7.3□□□□□ -1.24
SCUBE3Q8IX30 MIR4790-201ENST00000577799 79 ntBASIC7.3□□□□□ -1.24
SCUBE3Q8IX30 AC068418.1-201ENST00000582990 404 ntTSL 3 BASIC7.3□□□□□ -1.24
SCUBE3Q8IX30 AL136084.2-214ENST00000587726 716 ntTSL 5 BASIC7.3□□□□□ -1.24
SCUBE3Q8IX30 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC7.3□□□□□ -1.24
SCUBE3Q8IX30 AP2S1-210ENST00000601649 315 ntTSL 3 BASIC7.3□□□□□ -1.24
SCUBE3Q8IX30 AL670379.11-201ENST00000604059 253 ntBASIC7.3□□□□□ -1.24
SCUBE3Q8IX30 AL670379.10-201ENST00000604330 253 ntBASIC7.3□□□□□ -1.24
SCUBE3Q8IX30 AC111186.1-201ENST00000604684 130 ntBASIC7.3□□□□□ -1.24
SCUBE3Q8IX30 AL670379.12-201ENST00000605291 253 ntBASIC7.3□□□□□ -1.24
SCUBE3Q8IX30 AL670379.9-201ENST00000605428 253 ntBASIC7.3□□□□□ -1.24
SCUBE3Q8IX30 EDRF1-AS1-210ENST00000613304 569 ntTSL 5 BASIC7.3□□□□□ -1.24
SCUBE3Q8IX30 CR381572.1-201ENST00000625098 102 ntBASIC7.3□□□□□ -1.24
SCUBE3Q8IX30 OR3A3-203ENST00000641141 3800 ntAPPRIS P1 BASIC7.3□□□□□ -1.24
SCUBE3Q8IX30 COX7B-203ENST00000481445 2471 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
SCUBE3Q8IX30 FCF1-201ENST00000341162 4341 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
SCUBE3Q8IX30 UPF2-203ENST00000397053 5369 ntAPPRIS P1 TSL 5 BASIC7.3□□□□□ -1.24
SCUBE3Q8IX30 UTY-212ENST00000545955 6817 ntAPPRIS P5 TSL 1 (best) BASIC7.3□□□□□ -1.24
SCUBE3Q8IX30 SYTL4-203ENST00000372981 4847 ntTSL 2 BASIC7.3□□□□□ -1.24
SCUBE3Q8IX30 CATSPER2-202ENST00000381761 1758 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
SCUBE3Q8IX30 PDE4B-207ENST00000480109 2037 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
SCUBE3Q8IX30 DCHS2-207ENST00000623607 8912 ntAPPRIS P2 TSL 1 (best) BASIC7.3□□□□□ -1.24
SCUBE3Q8IX30 NIN-204ENST00000382043 4216 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
SCUBE3Q8IX30 LAMB4-201ENST00000205386 5857 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
SCUBE3Q8IX30 SGCD-202ENST00000435422 9755 ntAPPRIS ALT1 TSL 1 (best) BASIC7.3□□□□□ -1.24
SCUBE3Q8IX30 SALL4P7-201ENST00000555779 3120 ntBASIC7.3□□□□□ -1.24
SCUBE3Q8IX30 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
SCUBE3Q8IX30 SLC4A10-204ENST00000421911 3398 ntTSL 5 BASIC7.29□□□□□ -1.24
SCUBE3Q8IX30 AC092111.1-201ENST00000618256 3358 ntBASIC7.29□□□□□ -1.24
SCUBE3Q8IX30 ST8SIA5-203ENST00000538168 13761 ntTSL 2 BASIC7.29□□□□□ -1.24
SCUBE3Q8IX30 TMTC2-204ENST00000549919 6211 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
SCUBE3Q8IX30 TSC1-203ENST00000440111 8463 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
SCUBE3Q8IX30 IL2RA-203ENST00000379959 3176 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
SCUBE3Q8IX30 AMPD3-209ENST00000529507 3156 ntAPPRIS P1 TSL 2 BASIC7.29□□□□□ -1.24
SCUBE3Q8IX30 AL355377.1-201ENST00000621125 1653 ntBASIC7.29□□□□□ -1.24
SCUBE3Q8IX30 GTF2E1-201ENST00000283875 3012 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
SCUBE3Q8IX30 ARHGAP20-203ENST00000527598 5998 ntAPPRIS ALT2 TSL 1 (best) BASIC7.29□□□□□ -1.24
SCUBE3Q8IX30 HERC4-211ENST00000492996 3385 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
SCUBE3Q8IX30 OR1L8-202ENST00000641027 2024 ntAPPRIS P1 BASIC7.29□□□□□ -1.24
SCUBE3Q8IX30 UEVLD-202ENST00000320750 1799 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
SCUBE3Q8IX30 ZNF415-204ENST00000594011 2630 ntTSL 2 BASIC7.29□□□□□ -1.24
SCUBE3Q8IX30 RPL7-201ENST00000352983 1101 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
SCUBE3Q8IX30 IGKV7-3-201ENST00000357453 298 ntBASIC7.29□□□□□ -1.24
SCUBE3Q8IX30 RNU4-7P-201ENST00000364758 141 ntBASIC7.29□□□□□ -1.24
SCUBE3Q8IX30 Y_RNA.482-201ENST00000384377 111 ntBASIC7.29□□□□□ -1.24
SCUBE3Q8IX30 MIR99A-201ENST00000384906 81 ntBASIC7.29□□□□□ -1.24
SCUBE3Q8IX30 MIR323B-201ENST00000385269 82 ntBASIC7.29□□□□□ -1.24
SCUBE3Q8IX30 SSXP10-201ENST00000402595 565 ntBASIC7.29□□□□□ -1.24
SCUBE3Q8IX30 AL139397.2-201ENST00000404529 772 ntBASIC7.29□□□□□ -1.24
SCUBE3Q8IX30 ERMN-202ENST00000409216 746 ntTSL 4 BASIC7.29□□□□□ -1.24
SCUBE3Q8IX30 AL596448.1-201ENST00000415024 392 ntBASIC7.29□□□□□ -1.24
SCUBE3Q8IX30 NUCB1-AS1-201ENST00000416432 433 ntTSL 2 BASIC7.29□□□□□ -1.24
SCUBE3Q8IX30 ARL5AP1-201ENST00000418991 388 ntBASIC7.29□□□□□ -1.24
SCUBE3Q8IX30 AL135785.1-201ENST00000422554 399 ntTSL 3 BASIC7.29□□□□□ -1.24
SCUBE3Q8IX30 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
SCUBE3Q8IX30 AL138899.2-201ENST00000439139 499 ntBASIC7.29□□□□□ -1.24
SCUBE3Q8IX30 PRPS1P1-201ENST00000445305 876 ntBASIC7.29□□□□□ -1.24
SCUBE3Q8IX30 AL161722.1-201ENST00000446972 1032 ntBASIC7.29□□□□□ -1.24
SCUBE3Q8IX30 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC7.29□□□□□ -1.24
Retrieved 100 of 98,524 protein–RNA pairs in 114.6 ms