Protein–RNA interactions for Protein: Q5ST30

VARS2, Valine--tRNA ligase, mitochondrial, humanhuman

Known RBP Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2Q5ST30 RNU1-54P-201ENST00000517181 120 ntBASIC7.75□□□□□ -1.17
VARS2Q5ST30 AP001007.2-201ENST00000525429 593 ntTSL 3 BASIC7.75□□□□□ -1.17
VARS2Q5ST30 AC079089.1-203ENST00000533300 431 ntTSL 5 BASIC7.75□□□□□ -1.17
VARS2Q5ST30 MIR4800-201ENST00000537353 80 ntBASIC7.75□□□□□ -1.17
VARS2Q5ST30 AC006205.1-201ENST00000538067 389 ntTSL 2 BASIC7.75□□□□□ -1.17
VARS2Q5ST30 AL133163.3-201ENST00000556448 504 ntTSL 5 BASIC7.75□□□□□ -1.17
VARS2Q5ST30 RPA2P1-201ENST00000556557 721 ntBASIC7.75□□□□□ -1.17
VARS2Q5ST30 AC026471.4-201ENST00000569291 449 ntTSL 5 BASIC7.75□□□□□ -1.17
VARS2Q5ST30 MIR4775-201ENST00000581168 75 ntBASIC7.75□□□□□ -1.17
VARS2Q5ST30 MIR4470-201ENST00000583453 72 ntBASIC7.75□□□□□ -1.17
VARS2Q5ST30 IGLJCOR18-201ENST00000584002 424 ntBASIC7.75□□□□□ -1.17
VARS2Q5ST30 ZNF649-AS1-201ENST00000600329 579 ntTSL 4 BASIC7.75□□□□□ -1.17
VARS2Q5ST30 AC092747.3-201ENST00000603769 301 ntBASIC7.75□□□□□ -1.17
VARS2Q5ST30 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC7.75□□□□□ -1.17
VARS2Q5ST30 AL121809.2-201ENST00000613169 341 ntBASIC7.75□□□□□ -1.17
VARS2Q5ST30 AC026108.1-201ENST00000635444 547 ntBASIC7.75□□□□□ -1.17
VARS2Q5ST30 AC104461.1-201ENST00000637430 817 ntTSL 5 BASIC7.75□□□□□ -1.17
VARS2Q5ST30 AL356585.10-201ENST00000641883 123 ntBASIC7.75□□□□□ -1.17
VARS2Q5ST30 MAPK10-281ENST00000641170 3070 ntBASIC7.75□□□□□ -1.17
VARS2Q5ST30 VNN3-211ENST00000509351 1700 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
VARS2Q5ST30 CPM-202ENST00000546373 2116 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
VARS2Q5ST30 PROX1-201ENST00000261454 8170 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
VARS2Q5ST30 MIR17HG-202ENST00000581816 2032 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
VARS2Q5ST30 AC090017.1-201ENST00000548612 1779 ntBASIC7.74□□□□□ -1.17
VARS2Q5ST30 TP53BP1-202ENST00000382039 6015 ntTSL 5 BASIC7.74□□□□□ -1.17
VARS2Q5ST30 PPP2R2B-202ENST00000394409 10704 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
VARS2Q5ST30 B4GALT4-207ENST00000467604 5794 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
VARS2Q5ST30 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC7.74□□□□□ -1.17
VARS2Q5ST30 NPIPB4-203ENST00000415645 3606 ntAPPRIS P1 TSL 5 BASIC7.74□□□□□ -1.17
VARS2Q5ST30 IKZF3-215ENST00000535189 1996 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
VARS2Q5ST30 LIMD1-201ENST00000273317 11331 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
VARS2Q5ST30 RPL24P4-201ENST00000326586 421 ntBASIC7.74□□□□□ -1.17
VARS2Q5ST30 PPIAP22-201ENST00000358455 498 ntBASIC7.74□□□□□ -1.17
VARS2Q5ST30 MIR411-201ENST00000362239 96 ntBASIC7.74□□□□□ -1.17
VARS2Q5ST30 AL353740.1-201ENST00000366253 575 ntTSL 2 BASIC7.74□□□□□ -1.17
VARS2Q5ST30 HMGB1P17-201ENST00000403495 628 ntBASIC7.74□□□□□ -1.17
VARS2Q5ST30 RNU2-33P-201ENST00000410344 192 ntBASIC7.74□□□□□ -1.17
VARS2Q5ST30 RNU6-1203P-201ENST00000410703 110 ntBASIC7.74□□□□□ -1.17
VARS2Q5ST30 Z82198.3-201ENST00000421145 199 ntBASIC7.74□□□□□ -1.17
VARS2Q5ST30 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC7.74□□□□□ -1.17
VARS2Q5ST30 AL359853.3-201ENST00000423879 544 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
VARS2Q5ST30 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC7.74□□□□□ -1.17
VARS2Q5ST30 GYPE-202ENST00000437468 499 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
VARS2Q5ST30 CHEK2P4-201ENST00000450340 246 ntBASIC7.74□□□□□ -1.17
VARS2Q5ST30 SNAP25-AS1-205ENST00000453544 368 ntTSL 5 BASIC7.74□□□□□ -1.17
VARS2Q5ST30 TTTY19-201ENST00000453955 269 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
VARS2Q5ST30 SNRPFP3-201ENST00000457792 225 ntBASIC7.74□□□□□ -1.17
VARS2Q5ST30 AC004801.2-202ENST00000463559 283 ntBASIC7.74□□□□□ -1.17
VARS2Q5ST30 AC040975.1-201ENST00000472104 316 ntBASIC7.74□□□□□ -1.17
VARS2Q5ST30 RPS24P16-201ENST00000497294 392 ntBASIC7.74□□□□□ -1.17
VARS2Q5ST30 LINC00992-202ENST00000514186 564 ntTSL 5 BASIC7.74□□□□□ -1.17
VARS2Q5ST30 RNU6-897P-201ENST00000517135 105 ntBASIC7.74□□□□□ -1.17
VARS2Q5ST30 MAL2-201ENST00000522112 573 ntTSL 4 BASIC7.74□□□□□ -1.17
VARS2Q5ST30 AC090809.1-201ENST00000524132 570 ntTSL 4 BASIC7.74□□□□□ -1.17
VARS2Q5ST30 AC090673.2-201ENST00000544279 454 ntTSL 3 BASIC7.74□□□□□ -1.17
VARS2Q5ST30 AC079362.1-202ENST00000547089 278 ntTSL 3 BASIC7.74□□□□□ -1.17
VARS2Q5ST30 AL133279.1-201ENST00000553487 473 ntTSL 3 BASIC7.74□□□□□ -1.17
VARS2Q5ST30 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC7.74□□□□□ -1.17
VARS2Q5ST30 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC7.74□□□□□ -1.17
VARS2Q5ST30 RN7SL426P-201ENST00000579106 295 ntBASIC7.74□□□□□ -1.17
VARS2Q5ST30 AC092032.1-201ENST00000603090 165 ntBASIC7.74□□□□□ -1.17
VARS2Q5ST30 IGKV2OR2-7D-201ENST00000603664 304 ntBASIC7.74□□□□□ -1.17
VARS2Q5ST30 IGKV2OR2-7-201ENST00000604652 304 ntBASIC7.74□□□□□ -1.17
VARS2Q5ST30 AL121992.2-201ENST00000606262 256 ntBASIC7.74□□□□□ -1.17
VARS2Q5ST30 AC005520.5-201ENST00000613926 164 ntBASIC7.74□□□□□ -1.17
VARS2Q5ST30 TTTY15-202ENST00000440408 5284 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
VARS2Q5ST30 CRB1-202ENST00000367399 3885 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
VARS2Q5ST30 LINC00282-202ENST00000627246 4008 ntAPPRIS P5 TSL 2 BASIC7.74□□□□□ -1.17
VARS2Q5ST30 TMOD2-203ENST00000539962 3000 ntTSL 2 BASIC7.74□□□□□ -1.17
VARS2Q5ST30 CCDC162P-202ENST00000368966 6751 ntBASIC7.74□□□□□ -1.17
VARS2Q5ST30 SGK1-223ENST00000528577 1850 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
VARS2Q5ST30 NRXN3-203ENST00000428277 4219 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
VARS2Q5ST30 VWA3A-202ENST00000389398 4600 ntAPPRIS P2 TSL 5 BASIC7.74□□□□□ -1.17
VARS2Q5ST30 ARHGAP12-204ENST00000375250 4914 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
VARS2Q5ST30 PKP4-AS1-201ENST00000342892 4067 ntTSL 2 BASIC7.73□□□□□ -1.17
VARS2Q5ST30 PDZK1P1-201ENST00000401008 3498 ntTSL 2 BASIC7.73□□□□□ -1.17
VARS2Q5ST30 ASCC1-201ENST00000317126 1501 ntAPPRIS P1 TSL 2 BASIC7.73□□□□□ -1.17
VARS2Q5ST30 MYO1B-203ENST00000392316 4764 ntTSL 5 BASIC7.73□□□□□ -1.17
VARS2Q5ST30 BRCC3-203ENST00000369459 2641 ntTSL 5 BASIC7.73□□□□□ -1.17
VARS2Q5ST30 LINC02203-204ENST00000628444 2323 ntTSL 2 BASIC7.73□□□□□ -1.17
VARS2Q5ST30 NEK11-201ENST00000356918 1874 ntAPPRIS ALT2 TSL 5 BASIC7.73□□□□□ -1.17
VARS2Q5ST30 HSPA8P11-201ENST00000508840 1898 ntBASIC7.73□□□□□ -1.17
VARS2Q5ST30 AL442639.1-201ENST00000625030 1899 ntBASIC7.73□□□□□ -1.17
VARS2Q5ST30 AC068870.3-201ENST00000625077 2536 ntBASIC7.73□□□□□ -1.17
VARS2Q5ST30 NDUFS1-204ENST00000440274 2394 ntTSL 2 BASIC7.73□□□□□ -1.17
VARS2Q5ST30 SPP2-201ENST00000168148 1024 ntAPPRIS P2 TSL 1 (best) BASIC7.73□□□□□ -1.17
VARS2Q5ST30 DEFA6-201ENST00000297436 469 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
VARS2Q5ST30 OR1D2-201ENST00000331459 939 ntAPPRIS P1 BASIC7.73□□□□□ -1.17
VARS2Q5ST30 Y_RNA.54-201ENST00000362766 105 ntBASIC7.73□□□□□ -1.17
VARS2Q5ST30 RN7SKP174-201ENST00000363803 330 ntBASIC7.73□□□□□ -1.17
VARS2Q5ST30 RNU6-1078P-201ENST00000364522 103 ntBASIC7.73□□□□□ -1.17
VARS2Q5ST30 RNU12-2P-201ENST00000364789 156 ntBASIC7.73□□□□□ -1.17
VARS2Q5ST30 SNORA70.5-201ENST00000365519 135 ntBASIC7.73□□□□□ -1.17
VARS2Q5ST30 PKIB-203ENST00000368446 556 ntTSL 2 BASIC7.73□□□□□ -1.17
VARS2Q5ST30 CASP10-206ENST00000374650 1126 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
VARS2Q5ST30 SNORA68-201ENST00000384437 133 ntBASIC7.73□□□□□ -1.17
VARS2Q5ST30 MIR323B-201ENST00000385269 82 ntBASIC7.73□□□□□ -1.17
VARS2Q5ST30 RSPH14-202ENST00000406876 519 ntTSL 3 BASIC7.73□□□□□ -1.17
VARS2Q5ST30 POLHP1-201ENST00000411806 470 ntBASIC7.73□□□□□ -1.17
VARS2Q5ST30 AC011933.1-201ENST00000413334 321 ntBASIC7.73□□□□□ -1.17
Retrieved 100 of 98,524 protein–RNA pairs in 106.8 ms