Protein–RNA interactions for Protein: Q2I0M5

RSPO4, R-spondin-4, humanhuman

Predicted RBP Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO4Q2I0M5 AC092725.2-201ENST00000567658 1389 ntBASIC6.21□□□□□ -1.41
RSPO4Q2I0M5 CORIN-211ENST00000610355 4696 ntTSL 5 BASIC6.21□□□□□ -1.41
RSPO4Q2I0M5 FAM227A-205ENST00000535113 10322 ntAPPRIS ALT2 TSL 5 BASIC6.21□□□□□ -1.41
RSPO4Q2I0M5 AC090337.1-201ENST00000579651 2074 ntBASIC6.21□□□□□ -1.41
RSPO4Q2I0M5 AP000473.2-201ENST00000602659 1537 ntBASIC6.21□□□□□ -1.42
RSPO4Q2I0M5 AC032011.1-201ENST00000611703 1549 ntBASIC6.21□□□□□ -1.42
RSPO4Q2I0M5 AC132825.1-201ENST00000463573 2247 ntBASIC6.21□□□□□ -1.42
RSPO4Q2I0M5 AC007938.1-201ENST00000562524 2902 ntBASIC6.21□□□□□ -1.42
RSPO4Q2I0M5 ITPR1-202ENST00000354582 10242 ntTSL 5 BASIC6.21□□□□□ -1.42
RSPO4Q2I0M5 AC007998.4-201ENST00000612496 2533 ntBASIC6.21□□□□□ -1.42
RSPO4Q2I0M5 LINC02035-201ENST00000610128 5476 ntBASIC6.21□□□□□ -1.42
RSPO4Q2I0M5 NDUFA5-207ENST00000471770 5608 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
RSPO4Q2I0M5 PTPRG-AS1-204ENST00000474795 2661 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
RSPO4Q2I0M5 DDX60-201ENST00000393743 6071 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
RSPO4Q2I0M5 RPL6-201ENST00000202773 947 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
RSPO4Q2I0M5 RNU1-134P-201ENST00000362935 165 ntBASIC6.21□□□□□ -1.42
RSPO4Q2I0M5 U8.3-201ENST00000363321 132 ntBASIC6.21□□□□□ -1.42
RSPO4Q2I0M5 RNU6-31P-201ENST00000384388 108 ntBASIC6.21□□□□□ -1.42
RSPO4Q2I0M5 EI24P3-201ENST00000399046 1062 ntBASIC6.21□□□□□ -1.42
RSPO4Q2I0M5 RPL7P58-201ENST00000402913 758 ntBASIC6.21□□□□□ -1.42
RSPO4Q2I0M5 RN7SKP271-201ENST00000410528 320 ntBASIC6.21□□□□□ -1.42
RSPO4Q2I0M5 RNU2-42P-201ENST00000410697 113 ntBASIC6.21□□□□□ -1.42
RSPO4Q2I0M5 RNU6-1068P-201ENST00000410958 103 ntBASIC6.21□□□□□ -1.42
RSPO4Q2I0M5 TXNIP-201ENST00000425134 1225 ntTSL 2 BASIC6.21□□□□□ -1.42
RSPO4Q2I0M5 AL590666.1-201ENST00000428641 433 ntTSL 2 BASIC6.21□□□□□ -1.42
RSPO4Q2I0M5 AL590999.1-204ENST00000430595 638 ntTSL 3 BASIC6.21□□□□□ -1.42
RSPO4Q2I0M5 LPP-AS1-201ENST00000434996 494 ntTSL 3 BASIC6.21□□□□□ -1.42
RSPO4Q2I0M5 AL121957.1-202ENST00000437040 329 ntTSL 3 BASIC6.21□□□□□ -1.42
RSPO4Q2I0M5 AC135721.2-201ENST00000464237 300 ntBASIC6.21□□□□□ -1.42
RSPO4Q2I0M5 RN7SL643P-201ENST00000471845 291 ntBASIC6.21□□□□□ -1.42
RSPO4Q2I0M5 GAPDHP39-201ENST00000481866 979 ntBASIC6.21□□□□□ -1.42
RSPO4Q2I0M5 AC083800.1-201ENST00000490594 246 ntAPPRIS P1 TSL 3 BASIC6.21□□□□□ -1.42
RSPO4Q2I0M5 AC024558.1-201ENST00000505008 528 ntBASIC6.21□□□□□ -1.42
RSPO4Q2I0M5 RNA5SP434-201ENST00000516647 121 ntBASIC6.21□□□□□ -1.42
RSPO4Q2I0M5 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC6.21□□□□□ -1.42
RSPO4Q2I0M5 TPM3P3-201ENST00000521343 354 ntBASIC6.21□□□□□ -1.42
RSPO4Q2I0M5 MOCS2-208ENST00000527216 707 ntTSL 3 BASIC6.21□□□□□ -1.42
RSPO4Q2I0M5 ST3GAL3-233ENST00000531816 344 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
RSPO4Q2I0M5 PCNAP4-201ENST00000532690 730 ntBASIC6.21□□□□□ -1.42
RSPO4Q2I0M5 OR10G5P-201ENST00000532733 358 ntBASIC6.21□□□□□ -1.42
RSPO4Q2I0M5 AC027018.1-201ENST00000533978 396 ntTSL 4 BASIC6.21□□□□□ -1.42
RSPO4Q2I0M5 LINC02390-201ENST00000541404 560 ntTSL 4 BASIC6.21□□□□□ -1.42
RSPO4Q2I0M5 AL162311.1-201ENST00000553046 601 ntTSL 3 BASIC6.21□□□□□ -1.42
RSPO4Q2I0M5 OR11H7-201ENST00000553765 945 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
RSPO4Q2I0M5 AC016526.1-201ENST00000555465 520 ntTSL 3 BASIC6.21□□□□□ -1.42
RSPO4Q2I0M5 AC103968.1-201ENST00000557841 573 ntBASIC6.21□□□□□ -1.42
RSPO4Q2I0M5 AC009145.2-201ENST00000562685 377 ntTSL 3 BASIC6.21□□□□□ -1.42
RSPO4Q2I0M5 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC6.21□□□□□ -1.42
RSPO4Q2I0M5 AC090506.1-201ENST00000583089 572 ntTSL 4 BASIC6.21□□□□□ -1.42
RSPO4Q2I0M5 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
RSPO4Q2I0M5 AC010463.3-201ENST00000594077 500 ntBASIC6.21□□□□□ -1.42
RSPO4Q2I0M5 AC078938.1-201ENST00000620993 318 ntBASIC6.21□□□□□ -1.42
RSPO4Q2I0M5 C3orf79-201ENST00000623038 580 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
RSPO4Q2I0M5 AP006248.2-201ENST00000623309 592 ntBASIC6.21□□□□□ -1.42
RSPO4Q2I0M5 AC231657.1-201ENST00000624313 397 ntBASIC6.21□□□□□ -1.42
RSPO4Q2I0M5 AL691477.1-201ENST00000624398 162 ntBASIC6.21□□□□□ -1.42
RSPO4Q2I0M5 FASTKD3-201ENST00000264669 2402 ntAPPRIS P1 TSL 2 BASIC6.21□□□□□ -1.42
RSPO4Q2I0M5 DMTF1-213ENST00000432937 2411 ntTSL 2 BASIC6.21□□□□□ -1.42
RSPO4Q2I0M5 CDH18-205ENST00000506372 2432 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
RSPO4Q2I0M5 UGT2B24P-201ENST00000514441 1597 ntBASIC6.21□□□□□ -1.42
RSPO4Q2I0M5 AC020658.2-201ENST00000559030 4020 ntBASIC6.21□□□□□ -1.42
RSPO4Q2I0M5 GAPVD1-203ENST00000312123 4320 ntAPPRIS ALT1 TSL 1 (best) BASIC6.21□□□□□ -1.42
RSPO4Q2I0M5 SLC9A9-201ENST00000316549 3627 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
RSPO4Q2I0M5 AP001157.1-201ENST00000550837 2339 ntBASIC6.21□□□□□ -1.42
RSPO4Q2I0M5 ACTA2-AS1-201ENST00000437930 2450 ntTSL 2 BASIC6.21□□□□□ -1.42
RSPO4Q2I0M5 NRXN3-203ENST00000428277 4219 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
RSPO4Q2I0M5 UGT3A1-207ENST00000625798 3097 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
RSPO4Q2I0M5 CSDE1-201ENST00000261443 3228 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
RSPO4Q2I0M5 PLEKHM3-202ENST00000427836 9807 ntAPPRIS P1 TSL 5 BASIC6.21□□□□□ -1.42
RSPO4Q2I0M5 AC235565.1-201ENST00000456962 1325 ntBASIC6.21□□□□□ -1.42
RSPO4Q2I0M5 FAM114A2-201ENST00000351797 4443 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
RSPO4Q2I0M5 REV3L-203ENST00000368805 10461 ntAPPRIS P1 TSL 5 BASIC6.21□□□□□ -1.42
RSPO4Q2I0M5 C2CD6-203ENST00000439802 1639 ntAPPRIS ALT2 TSL 2 BASIC6.21□□□□□ -1.42
RSPO4Q2I0M5 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC6.21□□□□□ -1.42
RSPO4Q2I0M5 GJA9-202ENST00000360786 1901 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
RSPO4Q2I0M5 IBTK-201ENST00000306270 6054 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
RSPO4Q2I0M5 LINC02261-201ENST00000512873 2802 ntTSL 2 BASIC6.21□□□□□ -1.42
RSPO4Q2I0M5 A1CF-201ENST00000282641 9350 ntAPPRIS ALT1 TSL 2 BASIC6.21□□□□□ -1.42
RSPO4Q2I0M5 NRXN1-248ENST00000636345 3595 ntTSL 5 BASIC6.21□□□□□ -1.42
RSPO4Q2I0M5 AC019080.1-201ENST00000397057 5202 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
RSPO4Q2I0M5 MITF-206ENST00000394351 1956 ntAPPRIS P3 TSL 1 (best) BASIC6.2□□□□□ -1.42
RSPO4Q2I0M5 SMAD1-202ENST00000394092 1658 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
RSPO4Q2I0M5 ADAM20-201ENST00000256389 2795 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
RSPO4Q2I0M5 GAPVD1-202ENST00000297933 6003 ntAPPRIS ALT2 TSL 1 (best) BASIC6.2□□□□□ -1.42
RSPO4Q2I0M5 ORC3-206ENST00000546266 2470 ntTSL 2 BASIC6.2□□□□□ -1.42
RSPO4Q2I0M5 AC021242.1-201ENST00000507315 2035 ntBASIC6.2□□□□□ -1.42
RSPO4Q2I0M5 TMEM67-205ENST00000453321 4651 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
RSPO4Q2I0M5 DNM1L-203ENST00000381000 4397 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
RSPO4Q2I0M5 AC023245.2-201ENST00000530760 2978 ntBASIC6.2□□□□□ -1.42
RSPO4Q2I0M5 GABRA1-211ENST00000635880 1739 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
RSPO4Q2I0M5 FPGT-208ENST00000534056 1426 ntTSL 2 BASIC6.2□□□□□ -1.42
RSPO4Q2I0M5 AMPD3-209ENST00000529507 3156 ntAPPRIS P1 TSL 2 BASIC6.2□□□□□ -1.42
RSPO4Q2I0M5 Y_RNA.135-201ENST00000363439 95 ntBASIC6.2□□□□□ -1.42
RSPO4Q2I0M5 Y_RNA.159-201ENST00000363674 87 ntBASIC6.2□□□□□ -1.42
RSPO4Q2I0M5 SET-203ENST00000372688 801 ntTSL 2 BASIC6.2□□□□□ -1.42
RSPO4Q2I0M5 RNU6-171P-201ENST00000384354 107 ntBASIC6.2□□□□□ -1.42
RSPO4Q2I0M5 Y_RNA.489-201ENST00000384410 101 ntBASIC6.2□□□□□ -1.42
RSPO4Q2I0M5 HMGB3P2-201ENST00000411913 584 ntBASIC6.2□□□□□ -1.42
RSPO4Q2I0M5 AL391987.2-201ENST00000421848 492 ntTSL 5 BASIC6.2□□□□□ -1.42
RSPO4Q2I0M5 VDAC1P2-201ENST00000423609 850 ntBASIC6.2□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 72.4 ms