Protein–RNA interactions for Protein: P98160

HSPG2, Basement membrane-specific heparan sulfate proteoglycan core protein, humanhuman

Predictions only

Length 4,391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2P98160 AC139426.3-201ENST00000605648 2059 ntBASIC2.44□□□□□ -2.02
HSPG2P98160 GHR-211ENST00000618088 4491 ntAPPRIS P1 TSL 5 BASIC2.43□□□□□ -2.02
HSPG2P98160 PAX8-AS1-202ENST00000422956 11799 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
HSPG2P98160 RPGRIP1L-212ENST00000621565 6038 ntAPPRIS ALT1 TSL 1 (best) BASIC2.43□□□□□ -2.02
HSPG2P98160 LINC00972-202ENST00000438065 788 ntTSL 3 BASIC2.43□□□□□ -2.02
HSPG2P98160 AL031963.1-201ENST00000447644 695 ntTSL 3 BASIC2.43□□□□□ -2.02
HSPG2P98160 RSL24D1P3-201ENST00000449255 495 ntBASIC2.43□□□□□ -2.02
HSPG2P98160 LINC01921-201ENST00000456163 393 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
HSPG2P98160 MYLK-AS2-202ENST00000515464 754 ntTSL 2 BASIC2.43□□□□□ -2.02
HSPG2P98160 RNA5SP230-201ENST00000517039 122 ntBASIC2.43□□□□□ -2.02
HSPG2P98160 AC133552.5-201ENST00000604266 540 ntBASIC2.43□□□□□ -2.02
HSPG2P98160 AC244517.5-201ENST00000624139 722 ntTSL 3 BASIC2.43□□□□□ -2.02
HSPG2P98160 PTRH2-203ENST00000470557 4114 ntAPPRIS P3 BASIC2.43□□□□□ -2.02
HSPG2P98160 ZHX3-201ENST00000309060 10030 ntAPPRIS P1 TSL 5 BASIC2.43□□□□□ -2.02
HSPG2P98160 WDFY3-201ENST00000295888 14247 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
HSPG2P98160 CACNA1E-202ENST00000358338 14700 ntAPPRIS ALT2 TSL 5 BASIC2.43□□□□□ -2.02
HSPG2P98160 PLCB1-233ENST00000637919 5074 ntTSL 5 BASIC2.43□□□□□ -2.02
HSPG2P98160 CPD-202ENST00000543464 4007 ntTSL 2 BASIC2.43□□□□□ -2.02
HSPG2P98160 ZNF402P-201ENST00000404435 3100 ntBASIC2.43□□□□□ -2.02
HSPG2P98160 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC2.43□□□□□ -2.02
HSPG2P98160 SNORA38.1-201ENST00000364172 131 ntBASIC2.43□□□□□ -2.02
HSPG2P98160 ATP5JP1-201ENST00000431631 322 ntBASIC2.43□□□□□ -2.02
HSPG2P98160 HMGB3P9-201ENST00000441799 583 ntBASIC2.43□□□□□ -2.02
HSPG2P98160 DDX39BP2-208ENST00000453923 258 ntBASIC2.43□□□□□ -2.02
HSPG2P98160 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC2.43□□□□□ -2.02
HSPG2P98160 OSBPL9P2-201ENST00000526582 1228 ntBASIC2.43□□□□□ -2.02
HSPG2P98160 AC022081.1-201ENST00000537327 433 ntTSL 2 BASIC2.43□□□□□ -2.02
HSPG2P98160 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC2.43□□□□□ -2.02
HSPG2P98160 MIR5680-201ENST00000577577 84 ntBASIC2.43□□□□□ -2.02
HSPG2P98160 IMMP1LP1-201ENST00000605170 488 ntBASIC2.43□□□□□ -2.02
HSPG2P98160 AC022106.2-201ENST00000620114 757 ntBASIC2.43□□□□□ -2.02
HSPG2P98160 CNOT1-216ENST00000569240 7660 ntAPPRIS ALT1 TSL 1 (best) BASIC2.43□□□□□ -2.02
HSPG2P98160 R3HDM1-204ENST00000410054 4442 ntTSL 2 BASIC2.43□□□□□ -2.02
HSPG2P98160 LINC02225-201ENST00000510444 4069 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
HSPG2P98160 SERPINB7-202ENST00000398019 2203 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
HSPG2P98160 TIAM2-208ENST00000461783 6981 ntAPPRIS P1 TSL 2 BASIC2.43□□□□□ -2.02
HSPG2P98160 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC2.43□□□□□ -2.02
HSPG2P98160 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC2.43□□□□□ -2.02
HSPG2P98160 MDM4-215ENST00000614459 9782 ntTSL 5 BASIC2.43□□□□□ -2.02
HSPG2P98160 ATP5S-202ENST00000311459 10212 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
HSPG2P98160 UBE4A-203ENST00000545354 2149 ntTSL 2 BASIC2.43□□□□□ -2.02
HSPG2P98160 ETFBKMT-201ENST00000357721 6128 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
HSPG2P98160 GLIPR1L1-201ENST00000312442 1132 ntAPPRIS P3 TSL 1 (best) BASIC2.43□□□□□ -2.02
HSPG2P98160 ESCO2-202ENST00000397418 720 ntTSL 5 BASIC2.43□□□□□ -2.02
HSPG2P98160 ZNF736P2Y-201ENST00000416040 1279 ntBASIC2.43□□□□□ -2.02
HSPG2P98160 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC2.43□□□□□ -2.02
HSPG2P98160 AC139718.2-201ENST00000506068 481 ntTSL 3 BASIC2.43□□□□□ -2.02
HSPG2P98160 RNU7-143P-201ENST00000516781 65 ntBASIC2.43□□□□□ -2.02
HSPG2P98160 SNHG1-208ENST00000538266 347 ntTSL 3 BASIC2.43□□□□□ -2.02
HSPG2P98160 AC084759.1-201ENST00000561168 290 ntBASIC2.43□□□□□ -2.02
HSPG2P98160 AC034105.3-201ENST00000565294 442 ntBASIC2.43□□□□□ -2.02
HSPG2P98160 AC092138.1-201ENST00000568659 472 ntTSL 2 BASIC2.43□□□□□ -2.02
HSPG2P98160 AC136601.2-201ENST00000604356 474 ntBASIC2.43□□□□□ -2.02
HSPG2P98160 RNA5SP439-201ENST00000617595 124 ntBASIC2.43□□□□□ -2.02
HSPG2P98160 LINC01043-201ENST00000565936 6897 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
HSPG2P98160 SORCS1-209ENST00000612154 6862 ntTSL 5 BASIC2.43□□□□□ -2.02
HSPG2P98160 ZDBF2-201ENST00000374423 10286 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
HSPG2P98160 PLCE1-203ENST00000371385 6500 ntAPPRIS ALT2 TSL 5 BASIC2.43□□□□□ -2.02
HSPG2P98160 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC2.43□□□□□ -2.02
HSPG2P98160 CFAP70-203ENST00000355577 3691 ntTSL 5 BASIC2.43□□□□□ -2.02
HSPG2P98160 MTCO1P24-201ENST00000515438 1558 ntBASIC2.43□□□□□ -2.02
HSPG2P98160 TMEM251-201ENST00000283534 909 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
HSPG2P98160 MIR921-201ENST00000401133 56 ntBASIC2.42□□□□□ -2.02
HSPG2P98160 AC062016.2-201ENST00000420950 676 ntBASIC2.42□□□□□ -2.02
HSPG2P98160 ZDHHC20P2-201ENST00000424108 429 ntBASIC2.42□□□□□ -2.02
HSPG2P98160 PTP4A1P3-201ENST00000433661 420 ntBASIC2.42□□□□□ -2.02
HSPG2P98160 RPL23AP12-201ENST00000467573 473 ntBASIC2.42□□□□□ -2.02
HSPG2P98160 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC2.42□□□□□ -2.02
HSPG2P98160 AC087369.1-201ENST00000520775 996 ntBASIC2.42□□□□□ -2.02
HSPG2P98160 CARD18-201ENST00000526823 627 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
HSPG2P98160 LINC02553-201ENST00000529088 734 ntTSL 5 BASIC2.42□□□□□ -2.02
HSPG2P98160 AC079171.1-201ENST00000568788 914 ntBASIC2.42□□□□□ -2.02
HSPG2P98160 AC119674.1-207ENST00000641355 633 ntBASIC2.42□□□□□ -2.02
HSPG2P98160 PCDH18-202ENST00000412923 5102 ntAPPRIS ALT1 TSL 1 (best) BASIC2.42□□□□□ -2.02
HSPG2P98160 ST8SIA5-203ENST00000538168 13761 ntTSL 2 BASIC2.42□□□□□ -2.02
HSPG2P98160 KCNJ16-211ENST00000615244 4190 ntAPPRIS P1 TSL 4 BASIC2.42□□□□□ -2.02
HSPG2P98160 CCDC80-201ENST00000206423 12430 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
HSPG2P98160 ITPR1-204ENST00000443694 9513 ntAPPRIS ALT1 TSL 1 (best) BASIC2.42□□□□□ -2.02
HSPG2P98160 SYNCRIP-204ENST00000616122 6764 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
HSPG2P98160 PHLDB2-211ENST00000481953 5474 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
HSPG2P98160 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
HSPG2P98160 UACA-211ENST00000560441 4723 ntAPPRIS ALT2 TSL 5 BASIC2.42□□□□□ -2.02
HSPG2P98160 EYA1-205ENST00000388742 3907 ntAPPRIS P3 TSL 1 (best) BASIC2.42□□□□□ -2.02
HSPG2P98160 WDR63-203ENST00000370596 2905 ntAPPRIS ALT2 TSL 5 BASIC2.42□□□□□ -2.02
HSPG2P98160 RAB21-201ENST00000261263 15546 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
HSPG2P98160 SUPT16HP1-201ENST00000537175 3133 ntBASIC2.42□□□□□ -2.02
HSPG2P98160 ENPP2-202ENST00000259486 3233 ntAPPRIS P3 TSL 1 (best) BASIC2.42□□□□□ -2.02
HSPG2P98160 AL590609.3-201ENST00000411815 210 ntTSL 3 BASIC2.42□□□□□ -2.02
HSPG2P98160 RPS29P4-201ENST00000414733 161 ntBASIC2.42□□□□□ -2.02
HSPG2P98160 AC017079.2-201ENST00000416102 485 ntBASIC2.42□□□□□ -2.02
HSPG2P98160 DPY19L1P2-201ENST00000426647 915 ntBASIC2.42□□□□□ -2.02
HSPG2P98160 OR52Y1P-201ENST00000452418 828 ntBASIC2.42□□□□□ -2.02
HSPG2P98160 RPL36AP13-201ENST00000457490 317 ntBASIC2.42□□□□□ -2.02
HSPG2P98160 HMGB1P21-201ENST00000502313 581 ntBASIC2.42□□□□□ -2.02
HSPG2P98160 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC2.42□□□□□ -2.02
HSPG2P98160 RPL12P22-201ENST00000519073 490 ntBASIC2.42□□□□□ -2.02
HSPG2P98160 AC090150.2-201ENST00000521869 815 ntTSL 3 BASIC2.42□□□□□ -2.02
HSPG2P98160 AC008083.3-201ENST00000547777 329 ntTSL 3 BASIC2.42□□□□□ -2.02
HSPG2P98160 AL049844.2-201ENST00000604280 628 ntBASIC2.42□□□□□ -2.02
HSPG2P98160 POSTN-201ENST00000379742 3071 ntAPPRIS ALT2 TSL 1 (best) BASIC2.42□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 94.4 ms